RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 ULBP2Q9BZM5 246 aa10.38□□□□□ -0.75
SSR4-210ENST00000485612 RAD21L1Q9H4I0 556 aa10.38□□□□□ -0.75
SSR4-210ENST00000485612 VAPAQ9P0L0 249 aa10.38□□□□□ -0.75
SSR4-210ENST00000485612 POFUT2Q9Y2G5 429 aa10.38□□□□□ -0.75
SSR4-210ENST00000485612 C11orf98E9PRG8 122 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 PIN1P1O15428 100 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 VSIG8P0DPA2 414 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 NAT2P11245 290 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 GATA3P23771 443 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 PCGF2P35227 344 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 GLRXP35754 106 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 CDH12P55289 794 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 PUDPQ08623 228 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 SLC9A3R2Q15599 337 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 FXNQ16595 210 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 TRMT5Q32P41 509 aaKnown RBP10.37□□□□□ -0.75
SSR4-210ENST00000485612 LRIF1Q5T3J3 769 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 FAM91A1Q658Y4 838 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 REP15Q6BDI9 236 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 REEP3Q6NUK4 255 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 ULK3Q6PHR2 472 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 BRICD5Q6PL45 260 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 EPGNQ6UW88 154 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 WDR88Q6ZMY6 472 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 ZNF627Q7L945 461 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 NET1Q7Z628 596 aaPredicted RBP10.37□□□□□ -0.75
SSR4-210ENST00000485612 TREML1Q86YW5 311 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 SKA3Q8IX90 412 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 CCDC36Q8IYA8 594 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 IL17RDQ8NFM7 739 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 OR6N1Q8NGY5 312 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 WFDC12Q8WWY7 111 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 RAB39BQ96DA2 213 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 SLC47A1Q96FL8 570 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 LRR1Q96L50 414 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 FOXB1Q99853 325 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 RBM4BQ9BQ04 359 aaKnown RBP10.37□□□□□ -0.75
SSR4-210ENST00000485612 MRPL39Q9NYK5 338 aaKnown RBP10.37□□□□□ -0.75
SSR4-210ENST00000485612 TESQ9UGI8 421 aaKnown RBP10.37□□□□□ -0.75
SSR4-210ENST00000485612 RAB21Q9UL25 225 aa10.37□□□□□ -0.75
SSR4-210ENST00000485612 TRBV5-3A0A0A0MS03 114 aa10.36□□□□□ -0.75
SSR4-210ENST00000485612 A0A1B0GUS0 222 aa10.36□□□□□ -0.75
SSR4-210ENST00000485612 CLDN34H7C241 214 aa10.36□□□□□ -0.75
SSR4-210ENST00000485612 M0R3H8 397 aa10.36□□□□□ -0.75
SSR4-210ENST00000485612 PLPP3O14495 311 aa10.36□□□□□ -0.75
SSR4-210ENST00000485612 ZNF500O60304 480 aaPredicted RBP10.36□□□□□ -0.75
SSR4-210ENST00000485612 DEAF1O75398 565 aaPredicted RBP10.36□□□□□ -0.75
SSR4-210ENST00000485612 RAB36O95755 333 aa10.36□□□□□ -0.75
SSR4-210ENST00000485612 CLPTM1O96005 669 aa10.36□□□□□ -0.75
SSR4-210ENST00000485612 EVX1P49640 407 aa10.36□□□□□ -0.75
SSR4-210ENST00000485612 BIDP55957 195 aa10.36□□□□□ -0.75
SSR4-210ENST00000485612 MAGOHP61326 146 aaKnown RBP10.36□□□□□ -0.75
SSR4-210ENST00000485612 NCALDP61601 193 aa10.36□□□□□ -0.75
SSR4-210ENST00000485612 RAB1AP62820 205 aa10.36□□□□□ -0.75
SSR4-210ENST00000485612 MRPS11P82912 194 aaKnown RBP10.36□□□□□ -0.75
SSR4-210ENST00000485612 PMS2P3Q13401 168 aa10.36□□□□□ -0.75
SSR4-210ENST00000485612 SCARB2Q14108 478 aa10.36□□□□□ -0.75
SSR4-210ENST00000485612 RHOUQ7L0Q8 258 aa10.36□□□□□ -0.75
SSR4-210ENST00000485612 BCL6BQ8N143 479 aaPredicted RBP10.36□□□□□ -0.75
SSR4-210ENST00000485612 PAQR4Q8N4S7 273 aaPredicted RBP10.36□□□□□ -0.75
SSR4-210ENST00000485612 C10orf53Q8N6V4 93 aa10.36□□□□□ -0.75
SSR4-210ENST00000485612 KIR3DL3Q8N743 410 aa10.36□□□□□ -0.75
SSR4-210ENST00000485612 SCAIQ8N9R8 606 aa10.36□□□□□ -0.75
SSR4-210ENST00000485612 ZNF48Q96MX3 618 aaPredicted RBP10.36□□□□□ -0.75
SSR4-210ENST00000485612 TSPAN32Q96QS1 320 aa10.36□□□□□ -0.75
SSR4-210ENST00000485612 CITED1Q99966 193 aa10.36□□□□□ -0.75
SSR4-210ENST00000485612 EBF4Q9BQW3 602 aa10.36□□□□□ -0.75
SSR4-210ENST00000485612 ASPNQ9BXN1 380 aa10.36□□□□□ -0.75
SSR4-210ENST00000485612 OR51B6Q9H340 312 aa10.36□□□□□ -0.75
SSR4-210ENST00000485612 B3GAT2Q9NPZ5 323 aa10.36□□□□□ -0.75
SSR4-210ENST00000485612 ZNF69Q9UC07 566 aa10.36□□□□□ -0.75
SSR4-210ENST00000485612 NUP50Q9UKX7 468 aa10.36□□□□□ -0.75
SSR4-210ENST00000485612 NOX1Q9Y5S8 564 aa10.36□□□□□ -0.75
SSR4-210ENST00000485612 USH1CQ9Y6N9 552 aa10.36□□□□□ -0.75
SSR4-210ENST00000485612 ZNF726A6NNF4 738 aa10.35□□□□□ -0.75
SSR4-210ENST00000485612 RP2O75695 350 aa10.35□□□□□ -0.75
SSR4-210ENST00000485612 LYPD3O95274 346 aa10.35□□□□□ -0.75
SSR4-210ENST00000485612 OPN1SWP03999 348 aa10.35□□□□□ -0.75
SSR4-210ENST00000485612 THY1P04216 161 aa10.35□□□□□ -0.75
SSR4-210ENST00000485612 FAM157BP0CG42 384 aa10.35□□□□□ -0.75
SSR4-210ENST00000485612 ADORA3P0DMS8 318 aa10.35□□□□□ -0.75
SSR4-210ENST00000485612 CCL2P13500 99 aa10.35□□□□□ -0.75
SSR4-210ENST00000485612 AHCYP23526 432 aa10.35□□□□□ -0.75
SSR4-210ENST00000485612 MAGEB1P43366 347 aa10.35□□□□□ -0.75
SSR4-210ENST00000485612 CSNK1A1P48729 337 aa10.35□□□□□ -0.75
SSR4-210ENST00000485612 ERVS71-1P61550 626 aa10.35□□□□□ -0.75
SSR4-210ENST00000485612 MVKQ03426 396 aa10.35□□□□□ -0.75
SSR4-210ENST00000485612 MELKQ14680 651 aa10.35□□□□□ -0.75
SSR4-210ENST00000485612 NPTX1Q15818 432 aa10.35□□□□□ -0.75
SSR4-210ENST00000485612 AVPI1Q5T686 147 aa10.35□□□□□ -0.75
SSR4-210ENST00000485612 GKAP1Q5VSY0 366 aaPredicted RBP10.35□□□□□ -0.75
SSR4-210ENST00000485612 BLOC1S3Q6QNY0 202 aa10.35□□□□□ -0.75
SSR4-210ENST00000485612 Q6ZPA2 131 aa10.35□□□□□ -0.75
SSR4-210ENST00000485612 SPATC1Q76KD6 591 aa10.35□□□□□ -0.75
SSR4-210ENST00000485612 TSPYL5Q86VY4 417 aaPredicted RBP10.35□□□□□ -0.75
SSR4-210ENST00000485612 KRT73Q86Y46 540 aa10.35□□□□□ -0.75
SSR4-210ENST00000485612 SMYD1Q8NB12 490 aa10.35□□□□□ -0.75
SSR4-210ENST00000485612 OR4D11Q8NGI4 311 aa10.35□□□□□ -0.75
SSR4-210ENST00000485612 OR6S1Q8NH40 331 aa10.35□□□□□ -0.75
SSR4-210ENST00000485612 GTF3AQ92664 365 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms