RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 EMC6Q9BV81 110 aa11.14□□□□□ -0.63
HDAC6-227ENST00000485102 PAIP1Q9H074 479 aaKnown RBP11.14□□□□□ -0.63
HDAC6-227ENST00000485102 MYLK2Q9H1R3 596 aa11.14□□□□□ -0.63
HDAC6-227ENST00000485102 EVA1AQ9H8M9 152 aa11.14□□□□□ -0.63
HDAC6-227ENST00000485102 SLC52A3Q9NQ40 469 aa11.14□□□□□ -0.63
HDAC6-227ENST00000485102 MYEF2Q9P2K5 600 aaKnown RBP11.14□□□□□ -0.63
HDAC6-227ENST00000485102 TESQ9UGI8 421 aaKnown RBP11.14□□□□□ -0.63
HDAC6-227ENST00000485102 GPR160Q9UJ42 338 aa11.14□□□□□ -0.63
HDAC6-227ENST00000485102 A0A0B4J2E0 115 aa11.13□□□□□ -0.63
HDAC6-227ENST00000485102 A0A1B0GX12 115 aa11.13□□□□□ -0.63
HDAC6-227ENST00000485102 C17orf100A8MU93 164 aa11.13□□□□□ -0.63
HDAC6-227ENST00000485102 J3QLI3 93 aa11.13□□□□□ -0.63
HDAC6-227ENST00000485102 PLPP3O14495 311 aa11.13□□□□□ -0.63
HDAC6-227ENST00000485102 PPIHO43447 177 aaKnown RBP11.13□□□□□ -0.63
HDAC6-227ENST00000485102 NCR1O76036 304 aa11.13□□□□□ -0.63
HDAC6-227ENST00000485102 B4GALT1P15291 398 aa11.13□□□□□ -0.63
HDAC6-227ENST00000485102 NQO1P15559 274 aaKnown RBP11.13□□□□□ -0.63
HDAC6-227ENST00000485102 ZNF250P15622 560 aa11.13□□□□□ -0.63
HDAC6-227ENST00000485102 TCN1P20061 433 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-227ENST00000485102 EPHA1P21709 976 aa11.13□□□□□ -0.63
HDAC6-227ENST00000485102 CRYBB2P43320 205 aa11.13□□□□□ -0.63
HDAC6-227ENST00000485102 RASSF2P50749 326 aa11.13□□□□□ -0.63
HDAC6-227ENST00000485102 ACTG1P63261 375 aa11.13□□□□□ -0.63
HDAC6-227ENST00000485102 NFYCQ13952 458 aa11.13□□□□□ -0.63
HDAC6-227ENST00000485102 PCGF3Q3KNV8 242 aa11.13□□□□□ -0.63
HDAC6-227ENST00000485102 HACD2Q6Y1H2 254 aa11.13□□□□□ -0.63
HDAC6-227ENST00000485102 DPPA2Q7Z7J5 298 aa11.13□□□□□ -0.63
HDAC6-227ENST00000485102 ZNF584Q8IVC4 421 aa11.13□□□□□ -0.63
HDAC6-227ENST00000485102 BHLHE22Q8NFJ8 381 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-227ENST00000485102 OR8J3Q8NGG0 315 aa11.13□□□□□ -0.63
HDAC6-227ENST00000485102 OR9I1Q8NGQ6 314 aa11.13□□□□□ -0.63
HDAC6-227ENST00000485102 OR6N1Q8NGY5 312 aa11.13□□□□□ -0.63
HDAC6-227ENST00000485102 MAL2Q969L2 176 aa11.13□□□□□ -0.63
HDAC6-227ENST00000485102 SPATA5L1Q9BVQ7 753 aa11.13□□□□□ -0.63
HDAC6-227ENST00000485102 ASPNQ9BXN1 380 aa11.13□□□□□ -0.63
HDAC6-227ENST00000485102 ULBP2Q9BZM5 246 aa11.13□□□□□ -0.63
HDAC6-227ENST00000485102 MED29Q9NX70 200 aa11.13□□□□□ -0.63
HDAC6-227ENST00000485102 DEAF1O75398 565 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-227ENST00000485102 ATP5HO75947 161 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 SNAP29O95721 258 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 MT-ATP6P00846 226 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 AVPP01185 164 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 ARAFP10398 606 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 NAT2P11245 290 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 COX4I1P13073 169 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 GATA3P23771 443 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 SELENOVP59797 346 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 PMS2P3Q13401 168 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 CAMK2DQ13557 499 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 RAB39AQ14964 217 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 MAD2L1BPQ15013 274 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-227ENST00000485102 TUSC1Q2TAM9 212 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 SPATS1Q496A3 300 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 NRN1LQ496H8 165 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 CARD17Q5XLA6 110 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 RGS7BPQ6MZT1 257 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-227ENST00000485102 REEP3Q6NUK4 255 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 FAHD2BQ6P2I3 314 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-227ENST00000485102 LINC00114Q6XXX2 140 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 C1QL2Q7Z5L3 287 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 DHDDSQ86SQ9 333 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 COMTD1Q86VU5 262 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 KRT73Q86Y46 540 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 WDFY1Q8IWB7 410 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 SKA3Q8IX90 412 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 OR6X1Q8NH79 312 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 TMEM54Q969K7 222 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 FAHD2AQ96GK7 314 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 MOGAT1Q96PD6 335 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 SUCNR1Q9BXA5 334 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 TMPRSS13Q9BYE2 586 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 C1orf198Q9H425 327 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 TMEM27Q9HBJ8 222 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 LPAR2Q9HBW0 351 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 HINT3Q9NQE9 182 aaKnown RBP11.12□□□□□ -0.63
HDAC6-227ENST00000485102 SLCO1C1Q9NYB5 712 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 SELENONQ9NZV5 590 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-227ENST00000485102 TAGLN3Q9UI15 199 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 DUSP13Q9UII6 198 aa11.12□□□□□ -0.63
HDAC6-227ENST00000485102 PKD1L1Q8TDX9 2849 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 A0A0G2JMP0 313 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 A0A0X1KG70 313 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 C5orf58C9J3I9 102 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 MRASO14807 208 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 MGRN1O60291 552 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 TPST1O60507 370 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 TPST2O60704 377 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 OR8G3PP0DMU2 310 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 CALB2P22676 271 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 CBLP22681 906 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 CSNK1A1P48729 337 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 TEKQ02763 1124 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 RBBP4Q09028 425 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 ZP4Q12836 540 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 OR1Q1Q15612 314 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 GLIPR1L2Q4G1C9 344 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 LRFN4Q6PJG9 635 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 WDR88Q6ZMY6 472 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 SLC22A24Q8N4F4 322 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms