RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 PDIA2Q13087 525 aaKnown RBP3.35□□□□□ -1.87
VPS13A-211ENST00000484581 STK38Q15208 465 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 ULK3Q6PHR2 472 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 FAM220AQ7Z4H9 259 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 CMC1Q7Z7K0 106 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 ZNF100Q8IYN0 542 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 CMTM8Q8IZV2 173 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 ZNF525Q8N782 197 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 SPERTQ8NA61 448 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 LRRC75AQ8NAA5 344 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 MAPK1IP1LQ8NDC0 245 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 VN1R2Q8NFZ6 395 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 OR10H4Q8NGA5 316 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 OR2AP1Q8NGE2 309 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 OR5T3Q8NGG3 340 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 OR5B3Q8NH48 314 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 OR9G1Q8NH87 305 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 ZNF502Q8TBZ5 544 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 NAT6Q93015 286 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 TSG101Q99816 390 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 ARHGDIGQ99819 225 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 RARRES2Q99969 163 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 ECSITQ9BQ95 431 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 MRPL37Q9BZE1 423 aaKnown RBP3.35□□□□□ -1.87
VPS13A-211ENST00000484581 GFRA4Q9GZZ7 299 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 OR51J1Q9H342 316 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 PLGRKTQ9HBL7 147 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 SH2D2AQ9NP31 389 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 MYOZ2Q9NPC6 264 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 MARCH5Q9NX47 278 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 CD274Q9NZQ7 290 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 CCDC59Q9P031 241 aaKnown RBP3.35□□□□□ -1.87
VPS13A-211ENST00000484581 PAK5Q9P286 719 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 LGALS13Q9UHV8 139 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 GNPTGQ9UJJ9 305 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 GLYATL1P3A0A0U1RQE8 302 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 A0A1W2PQ72 361 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 TMEM120BA0PK00 339 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 FAM231BA6NCW3 169 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 C12orf71A8MTZ7 269 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 SCAMP2O15127 329 aaKnown RBP3.34□□□□□ -1.87
VPS13A-211ENST00000484581 RNF113AO15541 343 aaKnown RBP3.34□□□□□ -1.87
VPS13A-211ENST00000484581 IFNW1P05000 195 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 SERPINA5P05154 406 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 CCDC172P0C7W6 258 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 OR3A4PP47883 348 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 CCNG1P51959 295 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 HADHBP55084 474 aaKnown RBP3.34□□□□□ -1.87
VPS13A-211ENST00000484581 RIPPLY3P57055 190 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 ACTA2P62736 377 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 ACTG2P63267 376 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 ACTC1P68032 377 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 ACTA1P68133 377 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 TGFBR3Q03167 851 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 EOGTQ5NDL2 527 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 UTF1Q5T230 341 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 GPR157Q5UAW9 335 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 MARC1Q5VT66 337 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 MLIPQ5VWP3 458 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 BAIAP2L2Q6UXY1 529 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 FAM122BQ7Z309 247 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 PEX26Q7Z412 305 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 CSGALNACT2Q8N6G5 542 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 INO80EQ8NBZ0 244 aaPredicted RBP3.34□□□□□ -1.87
VPS13A-211ENST00000484581 OR5K2Q8NHB8 316 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 RHOXF1Q8NHV9 184 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 CIDECQ96AQ7 238 aaPredicted RBP3.34□□□□□ -1.87
VPS13A-211ENST00000484581 DUS3LQ96G46 650 aaKnown RBP3.34□□□□□ -1.87
VPS13A-211ENST00000484581 HES7Q9BYE0 225 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 ZYG11BQ9C0D3 744 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 SLC7A5P2Q9GIP4 190 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 OR2AG1Q9H205 316 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 AIG1Q9NVV5 245 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 CFAP45Q9UL16 551 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 STK38LQ9Y2H1 464 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 ZNF256Q9Y2P7 627 aaPredicted RBP3.34□□□□□ -1.87
VPS13A-211ENST00000484581 GOLT1BQ9Y3E0 138 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 CDH10Q9Y6N8 788 aa3.34□□□□□ -1.87
VPS13A-211ENST00000484581 CHD4Q14839 1912 aa3.34□□□□□ -1.88
VPS13A-211ENST00000484581 KIR2DL5BA0A0G2JN68 375 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 KIR2DL5BA0A0G2JPC4 375 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 SIVA1O15304 175 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 KDELR3O43731 214 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 THY1P04216 161 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 DCNP07585 359 aaKnown RBP3.33□□□□□ -1.88
VPS13A-211ENST00000484581 ACSM4P0C7M7 580 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 MGMTP16455 207 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 PTNP21246 168 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 ECH1Q13011 328 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 GPNMBQ14956 572 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 TRAM2Q15035 370 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 STK11Q15831 433 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 C15orf32Q32M92 178 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 LIN9Q5TKA1 542 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 ZNF620Q6ZNG0 422 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 MRPL21Q7Z2W9 205 aaKnown RBP3.33□□□□□ -1.88
VPS13A-211ENST00000484581 KIR2DL5AQ8N109 375 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 OR56A4Q8NGH8 313 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 KIR2DL5BQ8NHK3 375 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 MYDGFQ969H8 173 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms