RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 NUS1Q96E22 293 aa4.33□□□□□ -1.72
SSBP1-211ENST00000484178 OMA1Q96E52 524 aa4.33□□□□□ -1.72
SSBP1-211ENST00000484178 MMABQ96EY8 250 aaPredicted RBP4.33□□□□□ -1.72
SSBP1-211ENST00000484178 SIPA1Q96FS4 1042 aa4.33□□□□□ -1.72
SSBP1-211ENST00000484178 DGAT2Q96PD7 388 aa4.33□□□□□ -1.72
SSBP1-211ENST00000484178 MS4A4EQ96PG1 132 aa4.33□□□□□ -1.72
SSBP1-211ENST00000484178 C17orf62Q9BQA9 187 aa4.33□□□□□ -1.72
SSBP1-211ENST00000484178 ZNF559Q9BR84 538 aa4.33□□□□□ -1.72
SSBP1-211ENST00000484178 SLITRK2Q9H156 845 aa4.33□□□□□ -1.72
SSBP1-211ENST00000484178 OR52A5Q9H2C5 316 aa4.33□□□□□ -1.72
SSBP1-211ENST00000484178 MVB12BQ9H7P6 319 aa4.33□□□□□ -1.72
SSBP1-211ENST00000484178 NANSQ9NR45 359 aa4.33□□□□□ -1.72
SSBP1-211ENST00000484178 CMC2Q9NRP2 79 aa4.33□□□□□ -1.72
SSBP1-211ENST00000484178 SIRT3Q9NTG7 399 aaPredicted RBP4.33□□□□□ -1.72
SSBP1-211ENST00000484178 MED11Q9P086 117 aa4.33□□□□□ -1.72
SSBP1-211ENST00000484178 KIAA1456Q9P272 454 aa4.33□□□□□ -1.72
SSBP1-211ENST00000484178 ABI3Q9P2A4 366 aa4.33□□□□□ -1.72
SSBP1-211ENST00000484178 TRPC4Q9UBN4 977 aa4.33□□□□□ -1.72
SSBP1-211ENST00000484178 UPB1Q9UBR1 384 aa4.33□□□□□ -1.72
SSBP1-211ENST00000484178 ZNF107Q9UII5 783 aaPredicted RBP4.33□□□□□ -1.72
SSBP1-211ENST00000484178 ZNF580Q9UK33 172 aa4.33□□□□□ -1.72
SSBP1-211ENST00000484178 SPATA2Q9UM82 520 aa4.33□□□□□ -1.72
SSBP1-211ENST00000484178 SCML1Q9UN30 329 aa4.33□□□□□ -1.72
SSBP1-211ENST00000484178 GABRQQ9UN88 632 aa4.33□□□□□ -1.72
SSBP1-211ENST00000484178 ASF1AQ9Y294 204 aa4.33□□□□□ -1.72
SSBP1-211ENST00000484178 ZNF780BQ9Y6R6 833 aa4.33□□□□□ -1.72
SSBP1-211ENST00000484178 EP400Q96L91 3159 aa4.33□□□□□ -1.72
SSBP1-211ENST00000484178 EDDM13A0A1B0GTR0 161 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 A0A1W2PRG6 482 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 FAM90A8PA6NJQ4 464 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 PRR23D1E9PI22 279 aaPredicted RBP4.32□□□□□ -1.72
SSBP1-211ENST00000484178 H7C1Q1 480 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 GPR171O14626 319 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 OGG1O15527 345 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 SSNA1O43805 119 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 TMPRSS11DO60235 418 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 B3GALNT1O75752 331 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 POP7O75817 140 aaKnown RBP4.32□□□□□ -1.72
SSBP1-211ENST00000484178 TACSTD2P09758 323 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 UCHL1P09936 223 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 SLC35G4P0C7Q5 338 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 FAM90A13PP0C7W8 464 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 FAM90A24PP0C7X0 464 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 PRR23D2P0DMB1 279 aaPredicted RBP4.32□□□□□ -1.72
SSBP1-211ENST00000484178 OR12D1P0DN82 309 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 ELK1P19419 428 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 PSMB1P20618 241 aaKnown RBP4.32□□□□□ -1.72
SSBP1-211ENST00000484178 HIST1H1TP22492 207 aaPredicted RBP4.32□□□□□ -1.72
SSBP1-211ENST00000484178 SLC6A6P31641 620 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 RORAP35398 523 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 SSR2P43308 183 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 TGM4P49221 684 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 CENPAP49450 140 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 BLKP51451 505 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 NCBP2P52298 156 aaKnown RBP eCLIP4.32□□□□□ -1.72
SSBP1-211ENST00000484178 CTSCP53634 463 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 PSMD4P55036 377 aaKnown RBP4.32□□□□□ -1.72
SSBP1-211ENST00000484178 DLX5P56178 289 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 RGS8P57771 180 aaPredicted RBP4.32□□□□□ -1.72
SSBP1-211ENST00000484178 HOXA4Q00056 320 aaPredicted RBP4.32□□□□□ -1.72
SSBP1-211ENST00000484178 PRDX1Q06830 199 aaKnown RBP4.32□□□□□ -1.72
SSBP1-211ENST00000484178 FGL1Q08830 312 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 STX4Q12846 297 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 ZNF155Q12901 538 aaPredicted RBP4.32□□□□□ -1.72
SSBP1-211ENST00000484178 HSPB3Q12988 150 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 CAMK2DQ13557 499 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 GGTLC2Q14390 218 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 ELAVL3Q14576 367 aaKnown RBP4.32□□□□□ -1.72
SSBP1-211ENST00000484178 MFSD13AQ14CX5 517 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 FCN2Q15485 313 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 ZIC1Q15915 447 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 GSG1Q2KHT4 349 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 ARHGAP11BQ3KRB8 267 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 LEXMQ3ZCV2 418 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 Q5BKY6 102 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 MANEAQ5SRI9 462 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 IDNKQ5T6J7 187 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 PXDC1Q5TGL8 231 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 OR2G6Q5TZ20 316 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 OLFML2AQ68BL7 652 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 DMKNQ6E0U4 476 aaPredicted RBP4.32□□□□□ -1.72
SSBP1-211ENST00000484178 LPCAT3Q6P1A2 487 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 SLC48A1Q6P1K1 146 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 NIPAL3Q6P499 406 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 GLDNQ6ZMI3 551 aaPredicted RBP4.32□□□□□ -1.72
SSBP1-211ENST00000484178 ERN2Q76MJ5 926 aaKnown RBP4.32□□□□□ -1.72
SSBP1-211ENST00000484178 NUP54Q7Z3B4 507 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 HSD17B13Q7Z5P4 300 aaPredicted RBP4.32□□□□□ -1.72
SSBP1-211ENST00000484178 ADIPOR2Q86V24 386 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 NRROSQ86YC3 692 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 CDH26Q8IXH8 852 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 STPG2Q8N412 459 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 SAMD12Q8N8I0 201 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 CAMKVQ8NCB2 501 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 OR2L5Q8NG80 312 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 OR6T1Q8NGN1 323 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 OR2L8Q8NGY9 312 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 OR4C6Q8NH72 309 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 OR5AK3PQ8NH89 298 aa4.32□□□□□ -1.72
SSBP1-211ENST00000484178 TRMT10AQ8TBZ6 339 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms