RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 PCDHB10Q9UN67 800 aa17.92■□□□□ 0.46
RPUSD3-216ENST00000484134 LHX6Q9UPM6 363 aa17.92■□□□□ 0.46
RPUSD3-216ENST00000484134 YBX2Q9Y2T7 364 aaKnown RBP17.92■□□□□ 0.46
RPUSD3-216ENST00000484134 OR10H1Q9Y4A9 318 aa17.92■□□□□ 0.46
RPUSD3-216ENST00000484134 ATG2BQ96BY7 2078 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 A0A1W2PP55 124 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 KANTRA0A1W2PQU2 76 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 BCL2L11O43521 198 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 KCNJ13O60928 360 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 ALOX12BO75342 701 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 GPANK1O95872 356 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 TAF13Q15543 124 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 ISXQ2M1V0 245 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 ARHGAP40Q5TG30 622 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 CBLN2Q8IUK8 224 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 OR5M8Q8NGP6 311 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 FAM3DQ96BQ1 224 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 SEH1LQ96EE3 360 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 RBM18Q96H35 190 aaKnown RBP17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 GAL3ST1Q99999 423 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 NUP210LQ5VU65 1888 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 IGKV1D-42A0A075B6H8 117 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 TMEM218A2RU14 115 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 DISC1C4P0D8 188 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 MELTFP08582 738 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 BDKRB2P30411 391 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 KIR3DL2P43630 455 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 GPR143P51810 404 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 PGDP52209 483 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 ADPRHP54922 357 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 SCAND1P57086 179 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 SRSF5Q13243 272 aaKnown RBP17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 MANEAQ5SRI9 462 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 ATPAF1Q5TC12 328 aaPredicted RBP17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 ASPHD2Q6ICH7 369 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 FAM122BQ7Z309 247 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 AMELYQ99218 206 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 TSNAXQ99598 290 aaKnown RBP17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 WDR76Q9H967 626 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 MLXQ9UH92 298 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 GPN3Q9UHW5 284 aaPredicted RBP17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 DTX4Q9Y2E6 619 aa17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 MRPS23Q9Y3D9 190 aaKnown RBP17.91■□□□□ 0.46
RPUSD3-216ENST00000484134 HRKO00198 91 aa17.9■□□□□ 0.46
RPUSD3-216ENST00000484134 AKR7A3O95154 331 aa17.9■□□□□ 0.46
RPUSD3-216ENST00000484134 RAB3DO95716 219 aa17.9■□□□□ 0.46
RPUSD3-216ENST00000484134 LIPCP11150 499 aa17.9■□□□□ 0.46
RPUSD3-216ENST00000484134 DHRS2Q13268 280 aa17.9■□□□□ 0.46
RPUSD3-216ENST00000484134 C2orf27AQ580R0 203 aa17.9■□□□□ 0.46
RPUSD3-216ENST00000484134 C11orf87Q6NUJ2 197 aa17.9■□□□□ 0.46
RPUSD3-216ENST00000484134 TMEM205Q6UW68 189 aa17.9■□□□□ 0.46
RPUSD3-216ENST00000484134 CAMKVQ8NCB2 501 aa17.9■□□□□ 0.46
RPUSD3-216ENST00000484134 GPR148Q8TDV2 347 aa17.9■□□□□ 0.46
RPUSD3-216ENST00000484134 HOXB13Q92826 284 aaPredicted RBP17.9■□□□□ 0.46
RPUSD3-216ENST00000484134 ANKRD9Q96BM1 317 aaPredicted RBP17.9■□□□□ 0.46
RPUSD3-216ENST00000484134 ATG5Q9H1Y0 275 aa17.9■□□□□ 0.46
RPUSD3-216ENST00000484134 FGF22Q9HCT0 170 aa17.9■□□□□ 0.46
RPUSD3-216ENST00000484134 COA4Q9NYJ1 87 aa17.9■□□□□ 0.46
RPUSD3-216ENST00000484134 LINC01387J3KSC0 135 aa17.9■□□□□ 0.46
RPUSD3-216ENST00000484134 RAD1O60671 282 aa17.9■□□□□ 0.46
RPUSD3-216ENST00000484134 ACRP10323 421 aa17.9■□□□□ 0.46
RPUSD3-216ENST00000484134 PAN3Q58A45 887 aaKnown RBP17.9■□□□□ 0.46
RPUSD3-216ENST00000484134 DPY19L4Q7Z388 723 aa17.9■□□□□ 0.46
RPUSD3-216ENST00000484134 CCDC107Q8WV48 283 aa17.9■□□□□ 0.46
RPUSD3-216ENST00000484134 LMF1Q96S06 567 aa17.9■□□□□ 0.46
RPUSD3-216ENST00000484134 PIGMQ9H3S5 423 aa17.9■□□□□ 0.46
RPUSD3-216ENST00000484134 SRMSQ9H3Y6 488 aa17.9■□□□□ 0.46
RPUSD3-216ENST00000484134 IFT22Q9H7X7 185 aa17.9■□□□□ 0.46
RPUSD3-216ENST00000484134 LYRM4Q9HD34 91 aa17.9■□□□□ 0.46
RPUSD3-216ENST00000484134 CDV3Q9UKY7 258 aaKnown RBP17.9■□□□□ 0.46
RPUSD3-216ENST00000484134 COLEC10Q9Y6Z7 277 aa17.9■□□□□ 0.46
RPUSD3-216ENST00000484134 LTBP2Q14767 1821 aa17.89■□□□□ 0.46
RPUSD3-216ENST00000484134 KCNAB3O43448 404 aa17.89■□□□□ 0.45
RPUSD3-216ENST00000484134 FOXS1O43638 330 aa17.89■□□□□ 0.45
RPUSD3-216ENST00000484134 SRPX2O60687 465 aaPredicted RBP17.89■□□□□ 0.45
RPUSD3-216ENST00000484134 ZNF735P0CB33 412 aa17.89■□□□□ 0.45
RPUSD3-216ENST00000484134 S1PR1P21453 382 aa17.89■□□□□ 0.45
RPUSD3-216ENST00000484134 ITGB8P26012 769 aa17.89■□□□□ 0.45
RPUSD3-216ENST00000484134 ATP1B3P54709 279 aa17.89■□□□□ 0.45
RPUSD3-216ENST00000484134 SNTB1Q13884 538 aaKnown RBP17.89■□□□□ 0.45
RPUSD3-216ENST00000484134 ZNF345Q14585 488 aa17.89■□□□□ 0.45
RPUSD3-216ENST00000484134 CST6Q15828 149 aa17.89■□□□□ 0.45
RPUSD3-216ENST00000484134 LRRC69Q6ZNQ3 347 aa17.89■□□□□ 0.45
RPUSD3-216ENST00000484134 NDUFAF7Q7L592 441 aa17.89■□□□□ 0.45
RPUSD3-216ENST00000484134 JAZF1Q86VZ6 243 aa17.89■□□□□ 0.45
RPUSD3-216ENST00000484134 MOGAT1Q96PD6 335 aa17.89■□□□□ 0.45
RPUSD3-216ENST00000484134 DEFB118Q96PH6 123 aa17.89■□□□□ 0.45
RPUSD3-216ENST00000484134 GPX7Q96SL4 187 aaPredicted RBP17.89■□□□□ 0.45
RPUSD3-216ENST00000484134 SCPEP1Q9HB40 452 aa17.89■□□□□ 0.45
RPUSD3-216ENST00000484134 OR2F2O95006 317 aa17.89■□□□□ 0.45
RPUSD3-216ENST00000484134 F13BP05160 661 aa17.89■□□□□ 0.45
RPUSD3-216ENST00000484134 IGFALSP35858 605 aa17.89■□□□□ 0.45
RPUSD3-216ENST00000484134 SLC25A1P53007 311 aa17.89■□□□□ 0.45
RPUSD3-216ENST00000484134 SRSF4Q08170 494 aaKnown RBP17.89■□□□□ 0.45
RPUSD3-216ENST00000484134 OR2F1Q13607 317 aa17.89■□□□□ 0.45
RPUSD3-216ENST00000484134 ZNF550Q7Z398 422 aa17.89■□□□□ 0.45
RPUSD3-216ENST00000484134 PPP1R14AQ96A00 147 aa17.89■□□□□ 0.45
RPUSD3-216ENST00000484134 C3orf49Q96BT1 292 aa17.89■□□□□ 0.45
RPUSD3-216ENST00000484134 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.89■□□□□ 0.45
RPUSD3-216ENST00000484134 LRIT1Q9P2V4 623 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms