RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 ZNF350Q9GZX5 532 aa10.05□□□□□ -0.8
RPGR-208ENST00000482855 CXXC1Q9P0U4 656 aaPredicted RBP10.05□□□□□ -0.8
RPGR-208ENST00000482855 RPH3AQ9Y2J0 694 aaPredicted RBP10.05□□□□□ -0.8
RPGR-208ENST00000482855 FAM96BQ9Y3D0 163 aa10.05□□□□□ -0.8
RPGR-208ENST00000482855 SCN5AQ14524 2016 aa10.05□□□□□ -0.8
RPGR-208ENST00000482855 PMS2P1A4D2B8 440 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 PRR32B1ATL7 298 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 TXNL1O43396 289 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 OR8G3PP0DMU2 310 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 PRF1P14222 555 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 CSRP1P21291 193 aaKnown RBP10.04□□□□□ -0.8
RPGR-208ENST00000482855 SDHAP31040 664 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 RPL4P36578 427 aaKnown RBP10.04□□□□□ -0.8
RPGR-208ENST00000482855 POU3F4P49335 361 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 PRDX1Q06830 199 aaKnown RBP10.04□□□□□ -0.8
RPGR-208ENST00000482855 ALKBH1Q13686 389 aaKnown RBP10.04□□□□□ -0.8
RPGR-208ENST00000482855 RAB33AQ14088 237 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 NR0B2Q15466 257 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 SLC35D3Q5M8T2 416 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 CNKSR3Q6P9H4 555 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 JAZF1Q86VZ6 243 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 RAB42Q8N4Z0 105 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 TMEM229BQ8NBD8 167 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 SLC30A7Q8NEW0 376 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 OR10R2Q8NGX6 335 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 ZNF417Q8TAU3 575 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 TMED6Q8WW62 240 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 CCDC74AQ96AQ1 378 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 ZC3H10Q96K80 434 aaKnown RBP10.04□□□□□ -0.8
RPGR-208ENST00000482855 NMNAT3Q96T66 252 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 PAPOLGQ9BWT3 736 aaKnown RBP10.04□□□□□ -0.8
RPGR-208ENST00000482855 ACKR4Q9NPB9 350 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 PDE4DIPQ5VU43 2346 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 TRBV5-5A0A0J9YX44 114 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 MCIDASD6RGH6 385 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 ZNF208O43345 1280 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 HOXA2O43364 376 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 NARSO43776 548 aaKnown RBP10.04□□□□□ -0.8
RPGR-208ENST00000482855 VEGFDO43915 354 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 CD74P04233 296 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 FBP1P09467 338 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 LIPCP11150 499 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 PGAM2P15259 253 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 ZNF44P15621 663 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 RPS4Y1P22090 263 aaKnown RBP10.04□□□□□ -0.8
RPGR-208ENST00000482855 PAX6P26367 422 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 FHL1Q13642 323 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 RAB30Q15771 203 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 SCGB2B2Q4G0G5 96 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 LRRC25Q8N386 305 aaPredicted RBP10.04□□□□□ -0.8
RPGR-208ENST00000482855 GALNT16Q8N428 558 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 ATG5Q9H1Y0 275 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 METTL1Q9UBP6 276 aaKnown RBP10.04□□□□□ -0.8
RPGR-208ENST00000482855 SLC23A2Q9UGH3 650 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 DPP7Q9UHL4 492 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 PCOLCE2Q9UKZ9 415 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 ADAM18Q9Y3Q7 739 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 SLC22A7Q9Y694 548 aa10.04□□□□□ -0.8
RPGR-208ENST00000482855 SNRNP200O75643 2136 aaKnown RBP10.04□□□□□ -0.8
RPGR-208ENST00000482855 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.03□□□□□ -0.8
RPGR-208ENST00000482855 F8VVB4 439 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 F8VWA3 439 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 DCNP07585 359 aaKnown RBP10.03□□□□□ -0.8
RPGR-208ENST00000482855 SSTP61278 116 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 AKIRIN2Q53H80 203 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 TMEM240Q5SV17 173 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 DCST2Q5T1A1 773 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 ARHGAP40Q5TG30 622 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 TMEM215Q68D42 235 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 ZNF561Q8N587 486 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 OR4K17Q8NGC6 315 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 TMEM106AQ96A25 262 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 RNF166Q96A37 237 aaPredicted RBP10.03□□□□□ -0.8
RPGR-208ENST00000482855 FOXRED1Q96CU9 486 aaPredicted RBP10.03□□□□□ -0.8
RPGR-208ENST00000482855 VWCEQ96DN2 955 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 FBXO17Q96EF6 278 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 EGLN1Q9GZT9 426 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 RHOFQ9HBH0 211 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 RXFP3Q9NSD7 469 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 KCNE5Q9UJ90 142 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 YBX2Q9Y2T7 364 aaKnown RBP10.03□□□□□ -0.8
RPGR-208ENST00000482855 A0A0B4J2E0 115 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 A0A1B0GX12 115 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 APEHP13798 732 aaKnown RBP10.03□□□□□ -0.8
RPGR-208ENST00000482855 MUC1P15941 1255 aaPredicted RBP10.03□□□□□ -0.8
RPGR-208ENST00000482855 ZNF14P17017 642 aaPredicted RBP10.03□□□□□ -0.8
RPGR-208ENST00000482855 ZNF684Q5T5D7 378 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 BPIFB2Q8N4F0 458 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 TMEM41AQ96HV5 264 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 SELENOIQ9C0D9 397 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 HRH4Q9H3N8 390 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 SEMA6CQ9H3T2 930 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 KCNK15Q9H427 330 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 FBXO34Q9NWN3 711 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 FRRS1LQ9P0K9 344 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 EML5Q05BV3 1969 aa10.03□□□□□ -0.8
RPGR-208ENST00000482855 A0A0B4J2A0 478 aa10.02□□□□□ -0.8
RPGR-208ENST00000482855 A0A1B0GWA3 101 aa10.02□□□□□ -0.8
RPGR-208ENST00000482855 CPED1A4D0V7 1026 aa10.02□□□□□ -0.8
RPGR-208ENST00000482855 FAM171A2A8MVW0 826 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms