RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, human

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-215	ENST00000482714	SMPD3	Q9NY59	655 aa	Predicted RBP	13.54	□□□□□ -0.24
CCM2-215	ENST00000482714	TAS2R16	Q9NYV7	291 aa		13.54	□□□□□ -0.24
CCM2-215	ENST00000482714	PRSS50	Q9UI38	385 aa		13.54	□□□□□ -0.24
CCM2-215	ENST00000482714	KLF2	Q9Y5W3	355 aa	Predicted RBP	13.54	□□□□□ -0.24
CCM2-215	ENST00000482714	FREM1	Q5H8C1	2179 aa		13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	SLC22A23	A1A5C7	686 aa		13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	EEF1E1-BLOC1S5	C9J1V9	151 aa		13.53	□□□□□ -0.24
CCM2-215	ENST00000482714		M0R3G1	203 aa		13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	EEF1E1	O43324	174 aa	Known RBP	13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	MITF	O75030	526 aa	Predicted RBP	13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	REN	P00797	406 aa		13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	IGFBP1	P08833	259 aa	Predicted RBP	13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	HIST1H1C	P16403	213 aa	Known RBP	13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	PEX2	P28328	305 aa		13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	CRABP1	P29762	137 aa		13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	CD79B	P40259	229 aa		13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	CENPA	P49450	140 aa		13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	RUNX1T1	Q06455	604 aa		13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	SRSF1	Q07955	248 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	FAP	Q12884	760 aa		13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	TOP3A	Q13472	1001 aa	Predicted RBP	13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	KRR1	Q13601	381 aa	Known RBP	13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	C10orf128	Q5T292	105 aa		13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	SFRP5	Q5T4F7	317 aa		13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	SLX4IP	Q5VYV7	408 aa		13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	ACSM5	Q6NUN0	579 aa		13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	LRFN4	Q6PJG9	635 aa		13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	LUZP2	Q86TE4	346 aa		13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	P2RY8	Q86VZ1	359 aa		13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	JAZF1	Q86VZ6	243 aa		13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	C1orf162	Q8NEQ5	155 aa	Predicted RBP	13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	NOXO1	Q8NFA2	376 aa		13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	OR52E2	Q8NGJ4	325 aa		13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	OR4Q3	Q8NH05	313 aa		13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	MCHR2	Q969V1	340 aa		13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	NMD3	Q96D46	503 aa	Known RBP	13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	HRASLS5	Q96KN8	279 aa		13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	MUS81	Q96NY9	551 aa		13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	RBM24	Q9BX46	236 aa	Known RBP	13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	ULBP2	Q9BZM5	246 aa		13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	COL12A1	Q99715	3063 aa		13.53	□□□□□ -0.24
CCM2-215	ENST00000482714	SPTBN1	Q01082	2364 aa	Known RBP	13.52	□□□□□ -0.24
CCM2-215	ENST00000482714	RIIAD1	A6NNX1	92 aa		13.52	□□□□□ -0.25
CCM2-215	ENST00000482714		E9PQ18	207 aa		13.52	□□□□□ -0.25
CCM2-215	ENST00000482714	SLC16A6	O15403	523 aa		13.52	□□□□□ -0.25
CCM2-215	ENST00000482714	DHH	O43323	396 aa		13.52	□□□□□ -0.25
CCM2-215	ENST00000482714	QDPR	P09417	244 aa		13.52	□□□□□ -0.25
CCM2-215	ENST00000482714	COX5A	P20674	150 aa		13.52	□□□□□ -0.25
CCM2-215	ENST00000482714	CDKN2A	P42771	156 aa	Known RBP	13.52	□□□□□ -0.25
CCM2-215	ENST00000482714	GUCA1A	P43080	201 aa	Predicted RBP	13.52	□□□□□ -0.25
CCM2-215	ENST00000482714	SORD	Q00796	357 aa		13.52	□□□□□ -0.25
CCM2-215	ENST00000482714	LRRC36	Q1X8D7	754 aa		13.52	□□□□□ -0.25
CCM2-215	ENST00000482714	MEST	Q5EB52	335 aa		13.52	□□□□□ -0.25
CCM2-215	ENST00000482714	DNM1P34	Q6PK57	102 aa		13.52	□□□□□ -0.25
CCM2-215	ENST00000482714	ZNF627	Q7L945	461 aa		13.52	□□□□□ -0.25
CCM2-215	ENST00000482714	CCDC36	Q8IYA8	594 aa		13.52	□□□□□ -0.25
CCM2-215	ENST00000482714	NPEPL1	Q8NDH3	523 aa		13.52	□□□□□ -0.25
CCM2-215	ENST00000482714	STEAP2	Q8NFT2	490 aa		13.52	□□□□□ -0.25
CCM2-215	ENST00000482714	OR4K13	Q8NH42	304 aa		13.52	□□□□□ -0.25
CCM2-215	ENST00000482714	FN3K	Q9H479	309 aa		13.52	□□□□□ -0.25
CCM2-215	ENST00000482714	CRLF2	Q9HC73	371 aa		13.52	□□□□□ -0.25
CCM2-215	ENST00000482714	GPR35	Q9HC97	309 aa		13.52	□□□□□ -0.25
CCM2-215	ENST00000482714	HECTD1	Q9ULT8	2610 aa		13.52	□□□□□ -0.25
CCM2-215	ENST00000482714	FKBP7	Q9Y680	259 aa		13.52	□□□□□ -0.25
CCM2-215	ENST00000482714	C16orf97	H3BN30	126 aa		13.51	□□□□□ -0.25
CCM2-215	ENST00000482714	PPP3CB	P16298	524 aa		13.51	□□□□□ -0.25
CCM2-215	ENST00000482714	ZNF3	P17036	446 aa		13.51	□□□□□ -0.25
CCM2-215	ENST00000482714	NPR2	P20594	1047 aa		13.51	□□□□□ -0.25
CCM2-215	ENST00000482714	PAICS	P22234	425 aa	Known RBP	13.51	□□□□□ -0.25
CCM2-215	ENST00000482714	EDNRA	P25101	427 aa		13.51	□□□□□ -0.25
CCM2-215	ENST00000482714	ZNF84	P51523	738 aa		13.51	□□□□□ -0.25
CCM2-215	ENST00000482714	EFNB1	P98172	346 aa		13.51	□□□□□ -0.25
CCM2-215	ENST00000482714	ROR2	Q01974	943 aa	Known RBP	13.51	□□□□□ -0.25
CCM2-215	ENST00000482714	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
CCM2-215	ENST00000482714	CD47	Q08722	323 aa		13.51	□□□□□ -0.25
CCM2-215	ENST00000482714	SLC35F1	Q5T1Q4	408 aa		13.51	□□□□□ -0.25
CCM2-215	ENST00000482714	TTC23	Q5W5X9	447 aa		13.51	□□□□□ -0.25
CCM2-215	ENST00000482714	CARD17	Q5XLA6	110 aa		13.51	□□□□□ -0.25
CCM2-215	ENST00000482714	SLC25A47	Q6Q0C1	308 aa		13.51	□□□□□ -0.25
CCM2-215	ENST00000482714	GALNT4	Q8N4A0	578 aa		13.51	□□□□□ -0.25
CCM2-215	ENST00000482714	SYT14	Q8NB59	555 aa		13.51	□□□□□ -0.25
CCM2-215	ENST00000482714	RASD2	Q96D21	266 aa		13.51	□□□□□ -0.25
CCM2-215	ENST00000482714	NMNAT3	Q96T66	252 aa		13.51	□□□□□ -0.25
CCM2-215	ENST00000482714	WAC	Q9BTA9	647 aa		13.51	□□□□□ -0.25
CCM2-215	ENST00000482714	SLC24A3	Q9HC58	644 aa		13.51	□□□□□ -0.25
CCM2-215	ENST00000482714	ZNF99	A8MXY4	864 aa	Predicted RBP	13.5	□□□□□ -0.25
CCM2-215	ENST00000482714	SURF4	O15260	269 aa		13.5	□□□□□ -0.25
CCM2-215	ENST00000482714	KHDRBS3	O75525	346 aa	Known RBP	13.5	□□□□□ -0.25
CCM2-215	ENST00000482714	IGHV3-9	P01782	118 aa		13.5	□□□□□ -0.25
CCM2-215	ENST00000482714	IGHV1-2	P23083	117 aa		13.5	□□□□□ -0.25
CCM2-215	ENST00000482714	POLR2I	P36954	125 aa	Known RBP	13.5	□□□□□ -0.25
CCM2-215	ENST00000482714	PTDSS1	P48651	473 aa	Known RBP	13.5	□□□□□ -0.25
CCM2-215	ENST00000482714	BLVRA	P53004	296 aa		13.5	□□□□□ -0.25
CCM2-215	ENST00000482714	SLC25A1	P53007	311 aa		13.5	□□□□□ -0.25
CCM2-215	ENST00000482714	CDC42	P60953	191 aa		13.5	□□□□□ -0.25
CCM2-215	ENST00000482714	TFF3	Q07654	80 aa		13.5	□□□□□ -0.25
CCM2-215	ENST00000482714	KEAP1	Q14145	624 aa		13.5	□□□□□ -0.25
CCM2-215	ENST00000482714	SNAPC1	Q16533	368 aa		13.5	□□□□□ -0.25
CCM2-215	ENST00000482714	C12orf73	Q69YU5	71 aa		13.5	□□□□□ -0.25
CCM2-215	ENST00000482714	LEG1	Q6P5S2	330 aa		13.5	□□□□□ -0.25

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