RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 TAAR8Q969N4 342 aa3.56□□□□□ -1.84
VPS41-212ENST00000482217 CXorf40BQ96DE9 158 aa3.56□□□□□ -1.84
VPS41-212ENST00000482217 EPYCQ99645 322 aa3.56□□□□□ -1.84
VPS41-212ENST00000482217 NKX3-1Q99801 234 aaPredicted RBP3.56□□□□□ -1.84
VPS41-212ENST00000482217 TMEM121Q9BTD3 319 aa3.56□□□□□ -1.84
VPS41-212ENST00000482217 VN1R1Q9GZP7 353 aa3.56□□□□□ -1.84
VPS41-212ENST00000482217 NMUR2Q9GZQ4 415 aa3.56□□□□□ -1.84
VPS41-212ENST00000482217 TMEM38AQ9H6F2 299 aa3.56□□□□□ -1.84
VPS41-212ENST00000482217 ALG9Q9H6U8 611 aa3.56□□□□□ -1.84
VPS41-212ENST00000482217 PATZ1Q9HBE1 687 aaKnown RBP3.56□□□□□ -1.84
VPS41-212ENST00000482217 FGF20Q9NP95 211 aaPredicted RBP3.56□□□□□ -1.84
VPS41-212ENST00000482217 MYOZ1Q9NP98 299 aaPredicted RBP3.56□□□□□ -1.84
VPS41-212ENST00000482217 ARMC1Q9NVT9 282 aa3.56□□□□□ -1.84
VPS41-212ENST00000482217 TMEM9Q9P0T7 183 aa3.56□□□□□ -1.84
VPS41-212ENST00000482217 PAK5Q9P286 719 aa3.56□□□□□ -1.84
VPS41-212ENST00000482217 ZDHHC2Q9UIJ5 367 aa3.56□□□□□ -1.84
VPS41-212ENST00000482217 RWDD2AQ9UIY3 292 aa3.56□□□□□ -1.84
VPS41-212ENST00000482217 KLHL21Q9UJP4 597 aa3.56□□□□□ -1.84
VPS41-212ENST00000482217 RCL1Q9Y2P8 373 aaKnown RBP3.56□□□□□ -1.84
VPS41-212ENST00000482217 HEY1Q9Y5J3 304 aa3.56□□□□□ -1.84
VPS41-212ENST00000482217 CHD5Q8TDI0 1954 aa3.56□□□□□ -1.84
VPS41-212ENST00000482217 WDR81Q562E7 1941 aa3.56□□□□□ -1.84
VPS41-212ENST00000482217 AQRO60306 1485 aaKnown RBP eCLIP3.55□□□□□ -1.84
VPS41-212ENST00000482217 PTPRGP23470 1445 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 CNTLNQ9NXG0 1405 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 TEX13DA0A0J9YY54 714 aaPredicted RBP3.55□□□□□ -1.84
VPS41-212ENST00000482217 A0A1B0GTI1 187 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 LILRA5A6NI73 299 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 HIDE1A8MVS5 230 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 C21orf140B9A014 251 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 DISC1C4P0D8 188 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 INAFM1C9JVW0 142 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 H3BNH8 94 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 J3KR12 359 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 M0R036 132 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 INPP4BO15327 924 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 SLC16A4O15374 487 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 SPINT2O43291 252 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 MPZL2O60487 215 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 RAD1O60671 282 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 SHOX2O60902 331 aaPredicted RBP3.55□□□□□ -1.84
VPS41-212ENST00000482217 RNASEH1O60930 286 aaKnown RBP3.55□□□□□ -1.84
VPS41-212ENST00000482217 KHDRBS3O75525 346 aaKnown RBP3.55□□□□□ -1.84
VPS41-212ENST00000482217 CCNKO75909 580 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 KRT33AO76009 404 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 TOXO94900 526 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 CNIH1O95406 144 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 SNAP29O95721 258 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 TIMP1P01033 207 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 JCHAINP01591 159 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 IGHG3P01860 377 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 SLC35G4P0C7Q5 338 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 IMPDH1P20839 514 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 GCAP28676 217 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 GNRHRP30968 328 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 RPL3P39023 403 aaKnown RBP3.55□□□□□ -1.84
VPS41-212ENST00000482217 BTDP43251 543 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 AMTP48728 403 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 DNASE1L1P49184 302 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 MLLT10P55197 1068 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 DLX5P56178 289 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 CLDN17P56750 224 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 ISL1P61371 349 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 RHOAP61586 193 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 SEMG2Q02383 582 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 ACVR1Q04771 509 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 GPR17Q13304 367 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 RAB31Q13636 194 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 MEF2DQ14814 521 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 LTB4RQ15722 352 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 DGUOKQ16854 277 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 TRIM16LQ309B1 348 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 MS4A18Q3C1V0 323 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 SNAI3Q3KNW1 292 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 DCAF12Q5T6F0 453 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 FAM45BPQ6NSW5 357 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 NIPAL1Q6NVV3 410 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 C8orf82Q6P1X6 216 aaPredicted RBP3.55□□□□□ -1.84
VPS41-212ENST00000482217 DHRS11Q6UWP2 260 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 C5orf46Q6UWT4 87 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 CASP12Q6UXS9 341 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 HACD2Q6Y1H2 254 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 LHFPL3Q86UP9 236 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 BBS7Q8IWZ6 715 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 ZNF444Q8N0Y2 327 aaPredicted RBP3.55□□□□□ -1.84
VPS41-212ENST00000482217 STPG2Q8N412 459 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 TMEM35BQ8NCS4 154 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 DMBX1Q8NFW5 382 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 OR5M9Q8NGP3 310 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 OR5R1Q8NH85 324 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 OLIG1Q8TAK6 271 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 GATAD1Q8WUU5 269 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 KCTD4Q8WVF5 259 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 RORBQ92753 470 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 ZNF488Q96MN9 340 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 STACQ99469 402 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 TSNAXQ99598 290 aaKnown RBP3.55□□□□□ -1.84
VPS41-212ENST00000482217 MAP3K3Q99759 626 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 NUDT9Q9BW91 350 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 FAIM2Q9BWQ8 316 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms