RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 TAAR1Q96RJ0 339 aa3.52□□□□□ -1.85
SF3B1-210ENST00000482158 ECSITQ9BQ95 431 aa3.52□□□□□ -1.85
SF3B1-210ENST00000482158 OSBPL10Q9BXB5 764 aa3.52□□□□□ -1.85
SF3B1-210ENST00000482158 PKIBQ9C010 78 aa3.52□□□□□ -1.85
SF3B1-210ENST00000482158 ZNF223Q9UK11 482 aaPredicted RBP3.52□□□□□ -1.85
SF3B1-210ENST00000482158 RAB26Q9ULW5 256 aa3.52□□□□□ -1.85
SF3B1-210ENST00000482158 STARD10Q9Y365 291 aa3.52□□□□□ -1.85
SF3B1-210ENST00000482158 PRSS37A4D1T9 235 aa3.51□□□□□ -1.85
SF3B1-210ENST00000482158 SNAI2O43623 268 aa3.51□□□□□ -1.85
SF3B1-210ENST00000482158 SOX15O60248 233 aa3.51□□□□□ -1.85
SF3B1-210ENST00000482158 C6orf47O95873 294 aa3.51□□□□□ -1.85
SF3B1-210ENST00000482158 FGGP02679 453 aa3.51□□□□□ -1.85
SF3B1-210ENST00000482158 SMIM10L1P0DMW3 83 aa3.51□□□□□ -1.85
SF3B1-210ENST00000482158 SUCLG1P53597 346 aaKnown RBP3.51□□□□□ -1.85
SF3B1-210ENST00000482158 MRPS22P82650 360 aaKnown RBP3.51□□□□□ -1.85
SF3B1-210ENST00000482158 HMGCS1Q01581 520 aa3.51□□□□□ -1.85
SF3B1-210ENST00000482158 SMARCB1Q12824 385 aa3.51□□□□□ -1.85
SF3B1-210ENST00000482158 TGFBIQ15582 683 aa3.51□□□□□ -1.85
SF3B1-210ENST00000482158 TTLL9Q3SXZ7 439 aa3.51□□□□□ -1.85
SF3B1-210ENST00000482158 COA6Q5JTJ3 125 aaKnown RBP3.51□□□□□ -1.85
SF3B1-210ENST00000482158 SASS6Q6UVJ0 657 aa3.51□□□□□ -1.85
SF3B1-210ENST00000482158 TMEM135Q86UB9 458 aa3.51□□□□□ -1.85
SF3B1-210ENST00000482158 C12orf56Q8IXR9 622 aa3.51□□□□□ -1.85
SF3B1-210ENST00000482158 Q8N976 141 aa3.51□□□□□ -1.85
SF3B1-210ENST00000482158 ZNF596Q8TC21 504 aa3.51□□□□□ -1.85
SF3B1-210ENST00000482158 CD300LFQ8TDQ1 290 aa3.51□□□□□ -1.85
SF3B1-210ENST00000482158 RNF139Q8WU17 664 aa3.51□□□□□ -1.85
SF3B1-210ENST00000482158 GEMIN6Q8WXD5 167 aaKnown RBP3.51□□□□□ -1.85
SF3B1-210ENST00000482158 SMIM10Q96HG1 83 aa3.51□□□□□ -1.85
SF3B1-210ENST00000482158 CEP170P1Q96L14 293 aa3.51□□□□□ -1.85
SF3B1-210ENST00000482158 TCHPQ9BT92 498 aa3.51□□□□□ -1.85
SF3B1-210ENST00000482158 GPR61Q9BZJ8 451 aa3.51□□□□□ -1.85
SF3B1-210ENST00000482158 PLA2G2FQ9BZM2 168 aa3.51□□□□□ -1.85
SF3B1-210ENST00000482158 TPK1Q9H3S4 243 aa3.51□□□□□ -1.85
SF3B1-210ENST00000482158 MYOZ2Q9NPC6 264 aa3.51□□□□□ -1.85
SF3B1-210ENST00000482158 RRP15Q9Y3B9 282 aaKnown RBP3.51□□□□□ -1.85
SF3B1-210ENST00000482158 XKRYO14609 159 aa3.5□□□□□ -1.85
SF3B1-210ENST00000482158 ICOSLGO75144 302 aa3.5□□□□□ -1.85
SF3B1-210ENST00000482158 UTS2O95399 124 aa3.5□□□□□ -1.85
SF3B1-210ENST00000482158 TSPAN13O95857 204 aa3.5□□□□□ -1.85
SF3B1-210ENST00000482158 ZDHHC11BP0C7U3 371 aa3.5□□□□□ -1.85
SF3B1-210ENST00000482158 OMGP23515 440 aa3.5□□□□□ -1.85
SF3B1-210ENST00000482158 B3GNT7Q8NFL0 401 aa3.5□□□□□ -1.85
SF3B1-210ENST00000482158 STMN2Q93045 179 aa3.5□□□□□ -1.85
SF3B1-210ENST00000482158 CNDP1Q96KN2 507 aa3.5□□□□□ -1.85
SF3B1-210ENST00000482158 SH3GL3Q99963 347 aa3.5□□□□□ -1.85
SF3B1-210ENST00000482158 SLC17A9Q9BYT1 436 aa3.5□□□□□ -1.85
SF3B1-210ENST00000482158 NEUROG2Q9H2A3 272 aa3.5□□□□□ -1.85
SF3B1-210ENST00000482158 PSMC3IPQ9P2W1 217 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-210ENST00000482158 NUP50Q9UKX7 468 aa3.5□□□□□ -1.85
SF3B1-210ENST00000482158 RABL2BQ9UNT1 228 aa3.5□□□□□ -1.85
SF3B1-210ENST00000482158 CNTNAP1P78357 1384 aa3.5□□□□□ -1.85
SF3B1-210ENST00000482158 IGLV11-55A0A075B6I3 123 aa3.49□□□□□ -1.85
SF3B1-210ENST00000482158 IGLV3-16A0A075B6K0 115 aa3.49□□□□□ -1.85
SF3B1-210ENST00000482158 GOLGA8OA6NCC3 632 aa3.49□□□□□ -1.85
SF3B1-210ENST00000482158 HIDE1A8MVS5 230 aa3.49□□□□□ -1.85
SF3B1-210ENST00000482158 SPECC1L-ADORA2AF8WAN1 911 aa3.49□□□□□ -1.85
SF3B1-210ENST00000482158 GOLGA8NF8WBI6 632 aa3.49□□□□□ -1.85
SF3B1-210ENST00000482158 RPS2P15880 293 aaKnown RBP3.49□□□□□ -1.85
SF3B1-210ENST00000482158 ZNF32P17041 273 aa3.49□□□□□ -1.85
SF3B1-210ENST00000482158 CHMLP26374 656 aa3.49□□□□□ -1.85
SF3B1-210ENST00000482158 SERPINB5P36952 375 aa3.49□□□□□ -1.85
SF3B1-210ENST00000482158 NSG1P42857 185 aa3.49□□□□□ -1.85
SF3B1-210ENST00000482158 LRRC74AQ0VAA2 488 aa3.49□□□□□ -1.85
SF3B1-210ENST00000482158 GGTLC2Q14390 218 aa3.49□□□□□ -1.85
SF3B1-210ENST00000482158 PON3Q15166 354 aa3.49□□□□□ -1.85
SF3B1-210ENST00000482158 CCDC183Q5T5S1 534 aa3.49□□□□□ -1.85
SF3B1-210ENST00000482158 SPECC1LQ69YQ0 1117 aa3.49□□□□□ -1.85
SF3B1-210ENST00000482158 ZFP2Q6ZN57 461 aa3.49□□□□□ -1.85
SF3B1-210ENST00000482158 H2AFVQ71UI9 128 aa3.49□□□□□ -1.85
SF3B1-210ENST00000482158 LINC01551Q86U37 167 aa3.49□□□□□ -1.85
SF3B1-210ENST00000482158 CEP112Q8N8E3 955 aa3.49□□□□□ -1.85
SF3B1-210ENST00000482158 RAB3IL1Q8TBN0 382 aa3.49□□□□□ -1.85
SF3B1-210ENST00000482158 RASD2Q96D21 266 aa3.49□□□□□ -1.85
SF3B1-210ENST00000482158 TSSK3Q96PN8 268 aa3.49□□□□□ -1.85
SF3B1-210ENST00000482158 TM9SF3Q9HD45 589 aa3.49□□□□□ -1.85
SF3B1-210ENST00000482158 LSM7Q9UK45 103 aaKnown RBP3.49□□□□□ -1.85
SF3B1-210ENST00000482158 TBX21Q9UL17 535 aa3.49□□□□□ -1.85
SF3B1-210ENST00000482158 KIAA1257Q9ULG3 409 aa3.49□□□□□ -1.85
SF3B1-210ENST00000482158 IGLV4-69A0A075B6H9 119 aa3.48□□□□□ -1.85
SF3B1-210ENST00000482158 IGKV6D-21A0A0A0MT36 114 aa3.48□□□□□ -1.85
SF3B1-210ENST00000482158 TRAV39A0A0B4J263 110 aa3.48□□□□□ -1.85
SF3B1-210ENST00000482158 FAM47DPA6NHR8 397 aa3.48□□□□□ -1.85
SF3B1-210ENST00000482158 PPP1R2P9O14990 202 aa3.48□□□□□ -1.85
SF3B1-210ENST00000482158 MRPS12O15235 138 aaKnown RBP3.48□□□□□ -1.85
SF3B1-210ENST00000482158 PLEKP08567 350 aaPredicted RBP3.48□□□□□ -1.85
SF3B1-210ENST00000482158 HRH1P35367 487 aa3.48□□□□□ -1.85
SF3B1-210ENST00000482158 CCNHP51946 323 aaPredicted RBP3.48□□□□□ -1.85
SF3B1-210ENST00000482158 SLC7A9P82251 487 aa3.48□□□□□ -1.85
SF3B1-210ENST00000482158 LRRC63Q05C16 580 aa3.48□□□□□ -1.85
SF3B1-210ENST00000482158 EBI3Q14213 229 aa3.48□□□□□ -1.85
SF3B1-210ENST00000482158 VPS26BQ4G0F5 336 aa3.48□□□□□ -1.85
SF3B1-210ENST00000482158 PCP2Q8IVA1 136 aa3.48□□□□□ -1.85
SF3B1-210ENST00000482158 MMAAQ8IVH4 418 aaKnown RBP3.48□□□□□ -1.85
SF3B1-210ENST00000482158 FBXL13Q8NEE6 735 aa3.48□□□□□ -1.85
SF3B1-210ENST00000482158 GPR151Q8TDV0 419 aa3.48□□□□□ -1.85
SF3B1-210ENST00000482158 ZFP90Q8TF47 636 aa3.48□□□□□ -1.85
SF3B1-210ENST00000482158 PIBF1Q8WXW3 757 aa3.48□□□□□ -1.85
SF3B1-210ENST00000482158 MRPL37Q9BZE1 423 aaKnown RBP3.48□□□□□ -1.85
SF3B1-210ENST00000482158 RACGAP1Q9H0H5 632 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms