RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 MFSD13AQ14CX5 517 aa10.36□□□□□ -0.75
HPS4-212ENST00000481910 C1orf94Q6P1W5 598 aa10.36□□□□□ -0.75
HPS4-212ENST00000481910 HIST3H2AQ7L7L0 130 aa10.36□□□□□ -0.75
HPS4-212ENST00000481910 CD163Q86VB7 1156 aa10.36□□□□□ -0.75
HPS4-212ENST00000481910 HIPK1Q86Z02 1210 aa10.36□□□□□ -0.75
HPS4-212ENST00000481910 SVOPLQ8N434 492 aa10.36□□□□□ -0.75
HPS4-212ENST00000481910 ZPLD1Q8TCW7 415 aa10.36□□□□□ -0.75
HPS4-212ENST00000481910 HIST1H2ACQ93077 130 aa10.36□□□□□ -0.75
HPS4-212ENST00000481910 CPNE4Q96A23 557 aaPredicted RBP10.36□□□□□ -0.75
HPS4-212ENST00000481910 FEVQ99581 238 aa10.36□□□□□ -0.75
HPS4-212ENST00000481910 SRXN1Q9BYN0 137 aa10.36□□□□□ -0.75
HPS4-212ENST00000481910 Q9H521 79 aa10.36□□□□□ -0.75
HPS4-212ENST00000481910 OAZ3Q9UMX2 235 aa10.36□□□□□ -0.75
HPS4-212ENST00000481910 PRRC2CQ9Y520 2896 aaKnown RBP10.36□□□□□ -0.75
HPS4-212ENST00000481910 A0A1W2PRG6 482 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 PQLC2LA1A4F0 135 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 CLCA1A8K7I4 914 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 EFCAB9A8MZ26 197 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 TXNL1O43396 289 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 EIF1BO60739 113 aaKnown RBP10.35□□□□□ -0.75
HPS4-212ENST00000481910 AKR7A3O95154 331 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 APOL3O95236 402 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 GABRA1P14867 456 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 PCSK6P29122 969 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 GRPRP30550 384 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 CDK10Q15131 360 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 PON3Q15166 354 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 EMC4Q5J8M3 183 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 OTUD3Q5T2D3 398 aaPredicted RBP10.35□□□□□ -0.75
HPS4-212ENST00000481910 ZNF770Q6IQ21 691 aaPredicted RBP10.35□□□□□ -0.75
HPS4-212ENST00000481910 RAB12Q6IQ22 244 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 PGBD2Q6P3X8 592 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 PLXDC2Q6UX71 529 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 TMPRSS11FQ6ZWK6 438 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 ZNF454Q8N9F8 522 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 AQP11Q8NBQ7 271 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 LRRC20Q8TCA0 184 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 ZHX1-C8orf76Q96EF9 292 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 TRIB1Q96RU8 372 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 ASPNQ9BXN1 380 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 PRRG4Q9BZD6 226 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 FKRPQ9H9S5 495 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 ZNF229Q9UJW7 825 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 RALYQ9UKM9 306 aaKnown RBP10.35□□□□□ -0.75
HPS4-212ENST00000481910 ZNF835Q9Y2P0 537 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 CORINQ9Y5Q5 1042 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 IGHV3-15A0A0B4J1V0 119 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 ARRDC5A6NEK1 342 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 FIGNL2A6NMB9 653 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 CDC42EP2O14613 210 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 WDR1O75083 606 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 NDUFS6O75380 124 aaKnown RBP10.35□□□□□ -0.75
HPS4-212ENST00000481910 C1QL1O75973 258 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 SYNGR4O95473 234 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 BMI1P35226 326 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 GSK3AP49840 483 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 TMEM225Q6GV28 225 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 PAQR6Q6TCH4 344 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 SLC46A3Q7Z3Q1 461 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 OAFQ86UD1 273 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 UBE2J2Q8N2K1 259 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 TMEM99Q8N816 258 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 ATG16L2Q8NAA4 619 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 GNPDA2Q8TDQ7 276 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 ROBO4Q8WZ75 1007 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 GTPBP3Q969Y2 492 aaKnown RBP10.35□□□□□ -0.75
HPS4-212ENST00000481910 SEC14L4Q9UDX3 406 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 MCTS1Q9ULC4 181 aaKnown RBP10.35□□□□□ -0.75
HPS4-212ENST00000481910 MGAT4BQ9UQ53 548 aa10.35□□□□□ -0.75
HPS4-212ENST00000481910 RP1L1Q8IWN7 2480 aaPredicted RBP10.35□□□□□ -0.75
HPS4-212ENST00000481910 KIAA1549Q9HCM3 1950 aa10.34□□□□□ -0.75
HPS4-212ENST00000481910 SLC22A20A6NK97 555 aa10.34□□□□□ -0.75
HPS4-212ENST00000481910 ZNF879B4DU55 563 aa10.34□□□□□ -0.75
HPS4-212ENST00000481910 BLOC1S5-TXNDC5H3BN57 136 aa10.34□□□□□ -0.75
HPS4-212ENST00000481910 M0R082 166 aa10.34□□□□□ -0.75
HPS4-212ENST00000481910 DENRO43583 198 aaKnown RBP10.34□□□□□ -0.75
HPS4-212ENST00000481910 DNPH1O43598 174 aa10.34□□□□□ -0.75
HPS4-212ENST00000481910 TNFAIP8O95379 198 aa10.34□□□□□ -0.75
HPS4-212ENST00000481910 ASAH2BP0C7U1 165 aa10.34□□□□□ -0.75
HPS4-212ENST00000481910 SMIM18P0DKX4 95 aa10.34□□□□□ -0.75
HPS4-212ENST00000481910 ACVR2AP27037 513 aa10.34□□□□□ -0.75
HPS4-212ENST00000481910 CAPZA2P47755 286 aa10.34□□□□□ -0.75
HPS4-212ENST00000481910 AGFG1P52594 562 aaKnown RBP10.34□□□□□ -0.75
HPS4-212ENST00000481910 H3F3AP84243 136 aa10.34□□□□□ -0.75
HPS4-212ENST00000481910 TOP3AQ13472 1001 aaPredicted RBP10.34□□□□□ -0.75
HPS4-212ENST00000481910 ZNF239Q16600 458 aaKnown RBP10.34□□□□□ -0.75
HPS4-212ENST00000481910 UGT2A3Q6UWM9 527 aa10.34□□□□□ -0.75
HPS4-212ENST00000481910 C3P1Q6ZMU1 363 aa10.34□□□□□ -0.75
HPS4-212ENST00000481910 Q6ZPB1 254 aaPredicted RBP10.34□□□□□ -0.75
HPS4-212ENST00000481910 SLC16A12Q6ZSM3 486 aa10.34□□□□□ -0.75
HPS4-212ENST00000481910 H1FNTQ75WM6 255 aaPredicted RBP10.34□□□□□ -0.75
HPS4-212ENST00000481910 DOLPP1Q86YN1 238 aa10.34□□□□□ -0.75
HPS4-212ENST00000481910 CCDC103Q8IW40 242 aa10.34□□□□□ -0.75
HPS4-212ENST00000481910 MARVELD2Q8N4S9 558 aa10.34□□□□□ -0.75
HPS4-212ENST00000481910 OR5J2Q8NH18 312 aa10.34□□□□□ -0.75
HPS4-212ENST00000481910 OR51A7Q8NH64 312 aa10.34□□□□□ -0.75
HPS4-212ENST00000481910 ZNF417Q8TAU3 575 aa10.34□□□□□ -0.75
HPS4-212ENST00000481910 FNDC9Q8TBE3 224 aa10.34□□□□□ -0.75
HPS4-212ENST00000481910 LIPHQ8WWY8 451 aa10.34□□□□□ -0.75
HPS4-212ENST00000481910 ZNF587Q96SQ5 575 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms