RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 SCAMP2O15127 329 aaKnown RBP4.09□□□□□ -1.75
COPA-203ENST00000481040 GALR3O60755 368 aaPredicted RBP4.09□□□□□ -1.75
COPA-203ENST00000481040 ETHE1O95571 254 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 RBMY1DP0C7P1 496 aaKnown RBP4.09□□□□□ -1.75
COPA-203ENST00000481040 RBMY1A1P0DJD3 496 aaKnown RBP4.09□□□□□ -1.75
COPA-203ENST00000481040 OR1E1P30953 314 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 RPL34P49207 117 aaKnown RBP4.09□□□□□ -1.75
COPA-203ENST00000481040 SLC26A2P50443 739 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 UGT2B15P54855 530 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 ATP5J2P56134 94 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 TSC22D1Q15714 1073 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 RPEL1Q2QD12 228 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 PAN3Q58A45 887 aaKnown RBP4.09□□□□□ -1.75
COPA-203ENST00000481040 ERICH5Q6P6B1 374 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 UNQ9370/PRO34162Q6UXP9 181 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 SNX20Q7Z614 316 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 RBM45Q8IUH3 476 aaKnown RBP4.09□□□□□ -1.75
COPA-203ENST00000481040 CCDC71LQ8N9Z2 235 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 HSD17B11Q8NBQ5 300 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 FAM131CQ96AQ9 280 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 LINC00479Q96M42 142 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 TSSK3Q96PN8 268 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 OR5B12Q96R08 314 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 PSMB7Q99436 277 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 CHID1Q9BWS9 393 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 RAB1BQ9H0U4 201 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 C20orf85Q9H1P6 137 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 ISG20L2Q9H9L3 353 aaKnown RBP4.09□□□□□ -1.75
COPA-203ENST00000481040 SIAEQ9HAT2 523 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 GNB4Q9HAV0 340 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 CSNK1G1Q9HCP0 422 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 ACP6Q9NPH0 428 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 ZNF302Q9NR11 478 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 ADA2Q9NZK5 511 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 DCDC2Q9UHG0 476 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 KIF25Q9UIL4 384 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 KLHL21Q9UJP4 597 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 PROCRQ9UNN8 238 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 GOLT1BQ9Y3E0 138 aa4.09□□□□□ -1.75
COPA-203ENST00000481040 IGHV3OR16-13A0A075B7E8 117 aa4.08□□□□□ -1.76
COPA-203ENST00000481040 IGHV7-81A0A0B4J1V7 117 aa4.08□□□□□ -1.76
COPA-203ENST00000481040 RAB19A4D1S5 217 aa4.08□□□□□ -1.76
COPA-203ENST00000481040 ERVV-1B6SEH8 477 aa4.08□□□□□ -1.76
COPA-203ENST00000481040 SLC9A3R1O14745 358 aaPredicted RBP4.08□□□□□ -1.76
COPA-203ENST00000481040 GMDSO60547 372 aa4.08□□□□□ -1.76
COPA-203ENST00000481040 EIF3GO75821 320 aaKnown RBP eCLIP4.08□□□□□ -1.76
COPA-203ENST00000481040 YEATS4O95619 227 aa4.08□□□□□ -1.76
COPA-203ENST00000481040 ZNF250P15622 560 aa4.08□□□□□ -1.76
COPA-203ENST00000481040 STXBP1P61764 594 aaKnown RBP4.08□□□□□ -1.76
COPA-203ENST00000481040 PSMC5P62195 406 aa4.08□□□□□ -1.76
COPA-203ENST00000481040 IRX1P78414 480 aaPredicted RBP4.08□□□□□ -1.76
COPA-203ENST00000481040 CXCL6P80162 114 aa4.08□□□□□ -1.76
COPA-203ENST00000481040 PRR4Q16378 134 aa4.08□□□□□ -1.76
COPA-203ENST00000481040 GABRA6Q16445 453 aa4.08□□□□□ -1.76
COPA-203ENST00000481040 TRMT5Q32P41 509 aaKnown RBP4.08□□□□□ -1.76
COPA-203ENST00000481040 RALGAPA1Q6GYQ0 2036 aa4.08□□□□□ -1.76
COPA-203ENST00000481040 TFAP2EQ6VUC0 442 aa4.08□□□□□ -1.76
COPA-203ENST00000481040 SLC25A42Q86VD7 318 aa4.08□□□□□ -1.76
COPA-203ENST00000481040 SPATA24Q86W54 205 aa4.08□□□□□ -1.76
COPA-203ENST00000481040 ADGRA3Q8IWK6 1321 aa4.08□□□□□ -1.76
COPA-203ENST00000481040 ZBED8Q8IZ13 594 aa4.08□□□□□ -1.76
COPA-203ENST00000481040 OR10G3Q8NGC4 313 aa4.08□□□□□ -1.76
COPA-203ENST00000481040 SPATA3Q8NHX4 192 aa4.08□□□□□ -1.76
COPA-203ENST00000481040 NUBPLQ8TB37 319 aa4.08□□□□□ -1.76
COPA-203ENST00000481040 MED8Q96G25 268 aa4.08□□□□□ -1.76
COPA-203ENST00000481040 DEFB129Q9H1M3 183 aa4.08□□□□□ -1.76
COPA-203ENST00000481040 DMAP1Q9NPF5 467 aaPredicted RBP4.08□□□□□ -1.76
COPA-203ENST00000481040 EXD2Q9NVH0 621 aa4.08□□□□□ -1.76
COPA-203ENST00000481040 CALYQ9NYX4 217 aa4.08□□□□□ -1.76
COPA-203ENST00000481040 CTSFQ9UBX1 484 aa4.08□□□□□ -1.76
COPA-203ENST00000481040 GNPTGQ9UJJ9 305 aa4.08□□□□□ -1.76
COPA-203ENST00000481040 ZNF256Q9Y2P7 627 aaPredicted RBP4.08□□□□□ -1.76
COPA-203ENST00000481040 AK9Q5TCS8 1911 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 IGHV3-35A0A0C4DH35 117 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 KIR2DL5BA0A0G2JN68 375 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 KIR2DL5BA0A0G2JPC4 375 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 A0A1B0GW55 424 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 CENPXA8MT69 81 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 IQCF5A8MTL0 148 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 H7C0C1 242 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 H7C423 109 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 SLC19A2O60779 497 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 TBL1XO60907 577 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 DUX4L2P0CJ85 424 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 DUX4L3P0CJ86 424 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 DUX4L4P0CJ87 422 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 DUX4L5P0CJ88 424 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 DUX4L6P0CJ89 424 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 DUX4L7P0CJ90 424 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 CMA1P23946 247 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 SPAM1P38567 509 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 GLP1RP43220 463 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 GPR6P46095 362 aaPredicted RBP4.07□□□□□ -1.76
COPA-203ENST00000481040 ATP12AP54707 1039 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 ATP6V0D1P61421 351 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 SELENOTP62341 195 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 ZNF92Q03936 586 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 ACVR1Q04771 509 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 GGTLC2Q14390 218 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 VAMP3Q15836 100 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms