RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ZNF229Q9UJW7 825 aa13.12□□□□□ -0.31
LIMS3-203ENST00000480744 FBXL3Q9UKT7 428 aa13.12□□□□□ -0.31
LIMS3-203ENST00000480744 BLOC1S5-TXNDC5H3BN57 136 aa13.11□□□□□ -0.31
LIMS3-203ENST00000480744 DHHO43323 396 aa13.11□□□□□ -0.31
LIMS3-203ENST00000480744 FARS2O95363 451 aaKnown RBP13.11□□□□□ -0.31
LIMS3-203ENST00000480744 BCL10O95999 233 aa13.11□□□□□ -0.31
LIMS3-203ENST00000480744 OR8G3PP0DMU2 310 aa13.11□□□□□ -0.31
LIMS3-203ENST00000480744 EVX1P49640 407 aa13.11□□□□□ -0.31
LIMS3-203ENST00000480744 CLRN1P58418 232 aa13.11□□□□□ -0.31
LIMS3-203ENST00000480744 ZP4Q12836 540 aa13.11□□□□□ -0.31
LIMS3-203ENST00000480744 RIN1Q13671 783 aa13.11□□□□□ -0.31
LIMS3-203ENST00000480744 VMACQ2NL98 169 aa13.11□□□□□ -0.31
LIMS3-203ENST00000480744 LINC01356Q8N9X3 169 aa13.11□□□□□ -0.31
LIMS3-203ENST00000480744 TSPEARQ8WU66 669 aa13.11□□□□□ -0.31
LIMS3-203ENST00000480744 HPS1Q92902 700 aa13.11□□□□□ -0.31
LIMS3-203ENST00000480744 SLC25A44Q96H78 314 aaPredicted RBP13.11□□□□□ -0.31
LIMS3-203ENST00000480744 C19orf24Q9BVV8 132 aa13.11□□□□□ -0.31
LIMS3-203ENST00000480744 OR51B6Q9H340 312 aa13.11□□□□□ -0.31
LIMS3-203ENST00000480744 NARFLQ9H6Q4 476 aa13.11□□□□□ -0.31
LIMS3-203ENST00000480744 TMEM38BQ9NVV0 291 aa13.11□□□□□ -0.31
LIMS3-203ENST00000480744 SLC7A8Q9UHI5 535 aa13.11□□□□□ -0.31
LIMS3-203ENST00000480744 MCIDASD6RGH6 385 aa13.1□□□□□ -0.31
LIMS3-203ENST00000480744 ENTPD5O75356 428 aa13.1□□□□□ -0.31
LIMS3-203ENST00000480744 IGHG1P01857 330 aa13.1□□□□□ -0.31
LIMS3-203ENST00000480744 HPXP02790 462 aa13.1□□□□□ -0.31
LIMS3-203ENST00000480744 SERPINA5P05154 406 aa13.1□□□□□ -0.31
LIMS3-203ENST00000480744 QDPRP09417 244 aa13.1□□□□□ -0.31
LIMS3-203ENST00000480744 FAM157BP0CG42 384 aa13.1□□□□□ -0.31
LIMS3-203ENST00000480744 PGA4P0DJD7 388 aa13.1□□□□□ -0.31
LIMS3-203ENST00000480744 PGA3P0DJD8 388 aa13.1□□□□□ -0.31
LIMS3-203ENST00000480744 TNFRSF1BP20333 461 aa13.1□□□□□ -0.31
LIMS3-203ENST00000480744 THBS2P35442 1172 aa13.1□□□□□ -0.31
LIMS3-203ENST00000480744 SRP14P37108 136 aaKnown RBP13.1□□□□□ -0.31
LIMS3-203ENST00000480744 MYBPC1Q00872 1141 aa13.1□□□□□ -0.31
LIMS3-203ENST00000480744 CYLC2Q14093 348 aaPredicted RBP13.1□□□□□ -0.31
LIMS3-203ENST00000480744 FXNQ16595 210 aa13.1□□□□□ -0.31
LIMS3-203ENST00000480744 ALKBH6Q3KRA9 238 aa13.1□□□□□ -0.31
LIMS3-203ENST00000480744 TMEM53Q6P2H8 277 aa13.1□□□□□ -0.31
LIMS3-203ENST00000480744 LRFN4Q6PJG9 635 aa13.1□□□□□ -0.31
LIMS3-203ENST00000480744 DEF8Q6ZN54 512 aa13.1□□□□□ -0.31
LIMS3-203ENST00000480744 CARM1Q86X55 608 aa13.1□□□□□ -0.31
LIMS3-203ENST00000480744 ZNF584Q8IVC4 421 aa13.1□□□□□ -0.31
LIMS3-203ENST00000480744 SLC30A7Q8NEW0 376 aa13.1□□□□□ -0.31
LIMS3-203ENST00000480744 OR4K5Q8NGD3 323 aa13.1□□□□□ -0.31
LIMS3-203ENST00000480744 RASSF5Q8WWW0 418 aa13.1□□□□□ -0.31
LIMS3-203ENST00000480744 SIKE1Q9BRV8 207 aa13.1□□□□□ -0.31
LIMS3-203ENST00000480744 SLC19A3Q9BZV2 496 aa13.1□□□□□ -0.31
LIMS3-203ENST00000480744 CDH20Q9HBT6 801 aa13.1□□□□□ -0.31
LIMS3-203ENST00000480744 TMEFF2Q9UIK5 374 aaPredicted RBP13.1□□□□□ -0.31
LIMS3-203ENST00000480744 SH3GLB1Q9Y371 365 aa13.1□□□□□ -0.31
LIMS3-203ENST00000480744 SVEP1Q4LDE5 3571 aa13.1□□□□□ -0.31
LIMS3-203ENST00000480744 A0A1W2PRG6 482 aa13.09□□□□□ -0.31
LIMS3-203ENST00000480744 FBP2O00757 339 aa13.09□□□□□ -0.31
LIMS3-203ENST00000480744 SHOX2O60902 331 aaPredicted RBP13.09□□□□□ -0.31
LIMS3-203ENST00000480744 F13BP05160 661 aa13.09□□□□□ -0.31
LIMS3-203ENST00000480744 ASAH2BP0C7U1 165 aa13.09□□□□□ -0.31
LIMS3-203ENST00000480744 TROVE2P10155 538 aaKnown RBP eCLIP13.09□□□□□ -0.31
LIMS3-203ENST00000480744 NAT2P11245 290 aa13.09□□□□□ -0.31
LIMS3-203ENST00000480744 CCL2P13500 99 aa13.09□□□□□ -0.31
LIMS3-203ENST00000480744 GPR6P46095 362 aaPredicted RBP13.09□□□□□ -0.31
LIMS3-203ENST00000480744 GZMMP51124 257 aa13.09□□□□□ -0.31
LIMS3-203ENST00000480744 CRYBA2P53672 197 aa13.09□□□□□ -0.31
LIMS3-203ENST00000480744 CDH15P55291 814 aa13.09□□□□□ -0.31
LIMS3-203ENST00000480744 TAS2R41P59536 307 aa13.09□□□□□ -0.31
LIMS3-203ENST00000480744 NKPD1Q17RQ9 610 aa13.09□□□□□ -0.31
LIMS3-203ENST00000480744 RABL3Q5HYI8 236 aa13.09□□□□□ -0.31
LIMS3-203ENST00000480744 ELFN2Q5R3F8 820 aa13.09□□□□□ -0.31
LIMS3-203ENST00000480744 RGS7BPQ6MZT1 257 aaPredicted RBP13.09□□□□□ -0.31
LIMS3-203ENST00000480744 NANOGP8Q6NSW7 305 aa13.09□□□□□ -0.31
LIMS3-203ENST00000480744 SLC16A14Q7RTX9 510 aa13.09□□□□□ -0.31
LIMS3-203ENST00000480744 SYT14Q8NB59 555 aa13.09□□□□□ -0.31
LIMS3-203ENST00000480744 ICA1LQ8NDH6 482 aa13.09□□□□□ -0.31
LIMS3-203ENST00000480744 PFN4Q8NHR9 129 aa13.09□□□□□ -0.31
LIMS3-203ENST00000480744 C10orf82Q8WW14 230 aa13.09□□□□□ -0.31
LIMS3-203ENST00000480744 ZNF347Q96SE7 839 aa13.09□□□□□ -0.31
LIMS3-203ENST00000480744 ECSITQ9BQ95 431 aa13.09□□□□□ -0.31
LIMS3-203ENST00000480744 PRSS27Q9BQR3 290 aa13.09□□□□□ -0.31
LIMS3-203ENST00000480744 ZNF426Q9BUY5 554 aa13.09□□□□□ -0.31
LIMS3-203ENST00000480744 PCDHAC1Q9H158 963 aa13.09□□□□□ -0.31
LIMS3-203ENST00000480744 NANOGQ9H9S0 305 aa13.09□□□□□ -0.31
LIMS3-203ENST00000480744 MEPEQ9NQ76 525 aaPredicted RBP13.09□□□□□ -0.31
LIMS3-203ENST00000480744 ZNF346Q9UL40 294 aaKnown RBP13.09□□□□□ -0.31
LIMS3-203ENST00000480744 LCKP06239 509 aa13.08□□□□□ -0.32
LIMS3-203ENST00000480744 FUT1P19526 365 aa13.08□□□□□ -0.32
LIMS3-203ENST00000480744 COL8A2P25067 703 aa13.08□□□□□ -0.32
LIMS3-203ENST00000480744 ZNF84P51523 738 aa13.08□□□□□ -0.32
LIMS3-203ENST00000480744 UGT2B15P54855 530 aa13.08□□□□□ -0.32
LIMS3-203ENST00000480744 RUNX1T1Q06455 604 aa13.08□□□□□ -0.32
LIMS3-203ENST00000480744 RPL18Q07020 188 aaKnown RBP13.08□□□□□ -0.32
LIMS3-203ENST00000480744 SLC36A2Q495M3 483 aa13.08□□□□□ -0.32
LIMS3-203ENST00000480744 MMEL1Q495T6 779 aa13.08□□□□□ -0.32
LIMS3-203ENST00000480744 REP15Q6BDI9 236 aa13.08□□□□□ -0.32
LIMS3-203ENST00000480744 RINLQ6ZS11 566 aa13.08□□□□□ -0.32
LIMS3-203ENST00000480744 CCDC80Q76M96 950 aa13.08□□□□□ -0.32
LIMS3-203ENST00000480744 NKAIN4Q8IVV8 208 aa13.08□□□□□ -0.32
LIMS3-203ENST00000480744 PAQR4Q8N4S7 273 aaPredicted RBP13.08□□□□□ -0.32
LIMS3-203ENST00000480744 NOXO1Q8NFA2 376 aa13.08□□□□□ -0.32
LIMS3-203ENST00000480744 TMEM255BQ8WV15 326 aa13.08□□□□□ -0.32
LIMS3-203ENST00000480744 RDH5Q92781 318 aa13.08□□□□□ -0.32
LIMS3-203ENST00000480744 MCHR2Q969V1 340 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms