RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 HIST3H3Q16695 136 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 CYBRD1Q53TN4 286 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 C10orf128Q5T292 105 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 HACD2Q6Y1H2 254 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 WDR88Q6ZMY6 472 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 TUBA1AQ71U36 451 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 SLC16A14Q7RTX9 510 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 OFCC1Q8IZS5 231 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 MRPL24Q96A35 216 aaKnown RBP9.91□□□□□ -0.82
CCM2-213ENST00000480658 SORCS2Q96PQ0 1159 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 SEPHS2Q99611 448 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 RSPO3Q9BXY4 272 aaPredicted RBP9.91□□□□□ -0.82
CCM2-213ENST00000480658 BCL2L14Q9BZR8 327 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 RIMS3Q9UJD0 308 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 KCNS2Q9ULS6 477 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 LOC100653049A0A140TA62 436 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 A6NIZ1 184 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 LRRN3E7EW58 273 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 GSTA4O15217 222 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 AHCYL1O43865 530 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 KRT34O76011 436 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 TSPAN19P0C672 248 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 FAM157CP0CG43 387 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 SAGP10523 405 aaPredicted RBP9.9□□□□□ -0.82
CCM2-213ENST00000480658 ZNF35P13682 527 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 APEHP13798 732 aaKnown RBP9.9□□□□□ -0.82
CCM2-213ENST00000480658 DAOP14920 347 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 FUT1P19526 365 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 PTNP21246 168 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 MDH1P40925 334 aaKnown RBP9.9□□□□□ -0.82
CCM2-213ENST00000480658 ZNF133P52736 654 aaPredicted RBP9.9□□□□□ -0.82
CCM2-213ENST00000480658 RAP1BP61224 184 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 PCBD1P61457 104 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 RAP1AP62834 184 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 GUCY1A3Q02108 690 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 RPL18Q07020 188 aaKnown RBP9.9□□□□□ -0.82
CCM2-213ENST00000480658 SCGB2A2Q13296 93 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 TRAM2Q15035 370 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 IQCCQ4KMZ1 466 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 ALG10Q5BKT4 473 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 THEM4Q5T1C6 240 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 FAM166AQ6J272 317 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 KRT80Q6KB66 452 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 NHLRC1Q6VVB1 395 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 RRM2BQ7LG56 351 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 RBM45Q8IUH3 476 aaKnown RBP9.9□□□□□ -0.82
CCM2-213ENST00000480658 TEX29Q8N6K0 151 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 MAPK1IP1LQ8NDC0 245 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 SLC30A7Q8NEW0 376 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 SNX33Q8WV41 574 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 ZNF837Q96EG3 531 aaPredicted RBP9.9□□□□□ -0.82
CCM2-213ENST00000480658 TXNDC15Q96J42 360 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 TPD52L3Q96J77 140 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 KCNK17Q96T54 332 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 PRSS27Q9BQR3 290 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 WFDC6Q9BQY6 131 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 ALG12Q9BV10 488 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 FNDC11Q9BVV2 318 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 BEX2Q9BXY8 128 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 RNF121Q9H920 327 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 SIAEQ9HAT2 523 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 MEPEQ9NQ76 525 aaPredicted RBP9.9□□□□□ -0.82
CCM2-213ENST00000480658 SLCO1C1Q9NYB5 712 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 CGGBP1Q9UFW8 167 aaPredicted RBP9.9□□□□□ -0.82
CCM2-213ENST00000480658 RPS6KA6Q9UK32 745 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 TMEM5Q9Y2B1 443 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 HIF3AQ9Y2N7 669 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 ROS1P08922 2347 aa9.9□□□□□ -0.82
CCM2-213ENST00000480658 A0A096LNT2 108 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 VWC2LB2RUY7 222 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 SEC14L2O76054 403 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 LYPD3O95274 346 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 IGHMP01871 453 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 THY1P04216 161 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 CELA3BP08861 270 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 QDPRP09417 244 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 ACADSP16219 412 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 ZNF23P17027 643 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 APLNRP35414 380 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 CRYBA2P53672 197 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 MRPS34P82930 218 aaKnown RBP9.89□□□□□ -0.83
CCM2-213ENST00000480658 TEKQ02763 1124 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 HGFACQ04756 655 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 PIGFQ07326 219 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 PIN1Q13526 163 aaPredicted RBP9.89□□□□□ -0.83
CCM2-213ENST00000480658 GGTLC2Q14390 218 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 CARTPTQ16568 116 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 PCGF3Q3KNV8 242 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 IFI44LQ53G44 452 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 ZMAT1Q5H9K5 638 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 PHYHD1Q5SRE7 291 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 RGS7BPQ6MZT1 257 aaPredicted RBP9.89□□□□□ -0.83
CCM2-213ENST00000480658 ARL9Q6T311 187 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 ALDH16A1Q8IZ83 802 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 ZNF786Q8N393 782 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 SVOPLQ8N434 492 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 FAM156AQ8NDB6 213 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 RBM15BQ8NDT2 890 aaKnown RBP9.89□□□□□ -0.83
CCM2-213ENST00000480658 CPEB3Q8NE35 698 aaKnown RBP9.89□□□□□ -0.83
CCM2-213ENST00000480658 OR4D11Q8NGI4 311 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms