RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 ZNF718Q3SXZ3 478 aa9.74□□□□□ -0.85
USP11-208ENST00000480104 FAM153CQ494X1 144 aa9.74□□□□□ -0.85
USP11-208ENST00000480104 METTL11BQ5VVY1 283 aa9.74□□□□□ -0.85
USP11-208ENST00000480104 CCDC91Q7Z6B0 441 aa9.74□□□□□ -0.85
USP11-208ENST00000480104 PTOV1Q86YD1 416 aa9.74□□□□□ -0.85
USP11-208ENST00000480104 SKA3Q8IX90 412 aa9.74□□□□□ -0.85
USP11-208ENST00000480104 FAM76AQ8TAV0 307 aa9.74□□□□□ -0.85
USP11-208ENST00000480104 WIPF2Q8TF74 440 aaPredicted RBP9.74□□□□□ -0.85
USP11-208ENST00000480104 CNOT9Q92600 299 aaKnown RBP9.74□□□□□ -0.85
USP11-208ENST00000480104 SAMD8Q96LT4 415 aa9.74□□□□□ -0.85
USP11-208ENST00000480104 KCNA7Q96RP8 456 aa9.74□□□□□ -0.85
USP11-208ENST00000480104 GPR61Q9BZJ8 451 aa9.74□□□□□ -0.85
USP11-208ENST00000480104 ZNF350Q9GZX5 532 aa9.74□□□□□ -0.85
USP11-208ENST00000480104 RANBP3Q9H6Z4 567 aaPredicted RBP9.74□□□□□ -0.85
USP11-208ENST00000480104 HMX2A2RU54 273 aa9.73□□□□□ -0.85
USP11-208ENST00000480104 RAD51CO43502 376 aa9.73□□□□□ -0.85
USP11-208ENST00000480104 TNFRSF1AP19438 455 aa9.73□□□□□ -0.85
USP11-208ENST00000480104 CXCR1P25024 350 aa9.73□□□□□ -0.85
USP11-208ENST00000480104 CCT3P49368 545 aaKnown RBP9.73□□□□□ -0.85
USP11-208ENST00000480104 ETF1P62495 437 aaKnown RBP9.73□□□□□ -0.85
USP11-208ENST00000480104 C1DQ13901 141 aaKnown RBP9.73□□□□□ -0.85
USP11-208ENST00000480104 ZMAT1Q5H9K5 638 aa9.73□□□□□ -0.85
USP11-208ENST00000480104 C1orf140Q5VVS0 124 aa9.73□□□□□ -0.85
USP11-208ENST00000480104 OR56A1Q8NGH5 318 aa9.73□□□□□ -0.85
USP11-208ENST00000480104 GATAD1Q8WUU5 269 aa9.73□□□□□ -0.85
USP11-208ENST00000480104 ITLN1Q8WWA0 313 aa9.73□□□□□ -0.85
USP11-208ENST00000480104 ZNF382Q96SR6 550 aa9.73□□□□□ -0.85
USP11-208ENST00000480104 REEP4Q9H6H4 257 aa9.73□□□□□ -0.85
USP11-208ENST00000480104 SERTAD4Q9NUC0 356 aa9.73□□□□□ -0.85
USP11-208ENST00000480104 KMT2AQ03164 3969 aa9.73□□□□□ -0.85
USP11-208ENST00000480104 H0YHG0 523 aa9.72□□□□□ -0.85
USP11-208ENST00000480104 TP73O15350 636 aa9.72□□□□□ -0.85
USP11-208ENST00000480104 TBX19O60806 448 aa9.72□□□□□ -0.85
USP11-208ENST00000480104 LIPAP38571 399 aa9.72□□□□□ -0.85
USP11-208ENST00000480104 HABP2Q14520 560 aaPredicted RBP9.72□□□□□ -0.85
USP11-208ENST00000480104 IMPG1Q17R60 797 aa9.72□□□□□ -0.85
USP11-208ENST00000480104 SPDYE7PQ495Y7 208 aa9.72□□□□□ -0.85
USP11-208ENST00000480104 MROH9Q5TGP6 573 aa9.72□□□□□ -0.85
USP11-208ENST00000480104 MBNL2Q5VZF2 373 aaKnown RBP9.72□□□□□ -0.85
USP11-208ENST00000480104 AP1ARQ63HQ0 302 aa9.72□□□□□ -0.85
USP11-208ENST00000480104 ZNF841Q6ZN19 808 aa9.72□□□□□ -0.85
USP11-208ENST00000480104 TMEM139Q8IV31 216 aa9.72□□□□□ -0.85
USP11-208ENST00000480104 ZNF101Q8IZC7 436 aa9.72□□□□□ -0.85
USP11-208ENST00000480104 SCAIQ8N9R8 606 aa9.72□□□□□ -0.85
USP11-208ENST00000480104 CLHC1Q8NHS4 586 aa9.72□□□□□ -0.85
USP11-208ENST00000480104 KLF14Q8TD94 323 aaPredicted RBP9.72□□□□□ -0.85
USP11-208ENST00000480104 NSMAFQ92636 917 aa9.72□□□□□ -0.85
USP11-208ENST00000480104 OXGR1Q96P68 337 aa9.72□□□□□ -0.85
USP11-208ENST00000480104 CITED4Q96RK1 184 aa9.72□□□□□ -0.85
USP11-208ENST00000480104 BAG1Q99933 345 aaPredicted RBP9.72□□□□□ -0.85
USP11-208ENST00000480104 MECRQ9BV79 373 aa9.72□□□□□ -0.85
USP11-208ENST00000480104 C1QTNF3Q9BXJ4 246 aa9.72□□□□□ -0.85
USP11-208ENST00000480104 ULBP2Q9BZM5 246 aa9.72□□□□□ -0.85
USP11-208ENST00000480104 SLC19A3Q9BZV2 496 aa9.72□□□□□ -0.85
USP11-208ENST00000480104 OR2J1Q9GZK6 312 aa9.72□□□□□ -0.85
USP11-208ENST00000480104 C1orf198Q9H425 327 aa9.72□□□□□ -0.85
USP11-208ENST00000480104 B3GAT2Q9NPZ5 323 aa9.72□□□□□ -0.85
USP11-208ENST00000480104 CGGBP1Q9UFW8 167 aaPredicted RBP9.72□□□□□ -0.85
USP11-208ENST00000480104 CAB39Q9Y376 341 aaPredicted RBP9.72□□□□□ -0.85
USP11-208ENST00000480104 A8MT66 165 aa9.71□□□□□ -0.86
USP11-208ENST00000480104 A8MVM7 634 aa9.71□□□□□ -0.86
USP11-208ENST00000480104 H3BUX3 64 aa9.71□□□□□ -0.86
USP11-208ENST00000480104 AKAP8O43823 692 aaKnown RBP9.71□□□□□ -0.86
USP11-208ENST00000480104 AK1P00568 194 aa9.71□□□□□ -0.86
USP11-208ENST00000480104 RBP1P09455 135 aa9.71□□□□□ -0.86
USP11-208ENST00000480104 TNFSF4P23510 183 aa9.71□□□□□ -0.86
USP11-208ENST00000480104 CRATP43155 626 aa9.71□□□□□ -0.86
USP11-208ENST00000480104 DGCR2P98153 550 aa9.71□□□□□ -0.86
USP11-208ENST00000480104 LY6EQ16553 131 aa9.71□□□□□ -0.86
USP11-208ENST00000480104 ZNF404Q494X3 552 aa9.71□□□□□ -0.86
USP11-208ENST00000480104 RUNDC3AQ59EK9 446 aa9.71□□□□□ -0.86
USP11-208ENST00000480104 LYPD2Q6UXB3 125 aa9.71□□□□□ -0.86
USP11-208ENST00000480104 COMTD1Q86VU5 262 aa9.71□□□□□ -0.86
USP11-208ENST00000480104 OR2Z1Q8NG97 314 aa9.71□□□□□ -0.86
USP11-208ENST00000480104 OR1J2Q8NGS2 313 aa9.71□□□□□ -0.86
USP11-208ENST00000480104 OR5AK3PQ8NH89 298 aa9.71□□□□□ -0.86
USP11-208ENST00000480104 VANGL1Q8TAA9 524 aaPredicted RBP9.71□□□□□ -0.86
USP11-208ENST00000480104 SLC25A40Q8TBP6 338 aa9.71□□□□□ -0.86
USP11-208ENST00000480104 PYROXD1Q8WU10 500 aa9.71□□□□□ -0.86
USP11-208ENST00000480104 TFAP2CQ92754 450 aa9.71□□□□□ -0.86
USP11-208ENST00000480104 TECTBQ96PL2 329 aa9.71□□□□□ -0.86
USP11-208ENST00000480104 TSSK3Q96PN8 268 aa9.71□□□□□ -0.86
USP11-208ENST00000480104 SH3GL3Q99963 347 aa9.71□□□□□ -0.86
USP11-208ENST00000480104 EMC6Q9BV81 110 aa9.71□□□□□ -0.86
USP11-208ENST00000480104 MAB21L2Q9Y586 359 aa9.71□□□□□ -0.86
USP11-208ENST00000480104 UBR4Q5T4S7 5183 aa9.7□□□□□ -0.86
USP11-208ENST00000480104 FTCDNL1E5RQL4 147 aa9.7□□□□□ -0.86
USP11-208ENST00000480104 CYB5R3P00387 301 aaPredicted RBP9.7□□□□□ -0.86
USP11-208ENST00000480104 PAHP00439 452 aa9.7□□□□□ -0.86
USP11-208ENST00000480104 LHBP01229 141 aa9.7□□□□□ -0.86
USP11-208ENST00000480104 LIPFP07098 398 aa9.7□□□□□ -0.86
USP11-208ENST00000480104 TFPTP0C1Z6 253 aa9.7□□□□□ -0.86
USP11-208ENST00000480104 WNT5AP41221 380 aa9.7□□□□□ -0.86
USP11-208ENST00000480104 GATA4P43694 442 aa9.7□□□□□ -0.86
USP11-208ENST00000480104 KCNJ10P78508 379 aa9.7□□□□□ -0.86
USP11-208ENST00000480104 SMU1Q2TAY7 513 aa9.7□□□□□ -0.86
USP11-208ENST00000480104 MTX3Q5HYI7 312 aa9.7□□□□□ -0.86
USP11-208ENST00000480104 FAM201AQ5SY85 155 aa9.7□□□□□ -0.86
USP11-208ENST00000480104 TYW3Q6IPR3 259 aaKnown RBP9.7□□□□□ -0.86
USP11-208ENST00000480104 RFPL4BQ6ZWI9 263 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms