RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 DNAJB11Q9UBS4 358 aa19.34■□□□□ 0.69
SDF4-206ENST00000478938 MARCH11A6NNE9 402 aa19.33■□□□□ 0.69
SDF4-206ENST00000478938 H3BSH0 61 aa19.33■□□□□ 0.69
SDF4-206ENST00000478938 EREGO14944 169 aa19.33■□□□□ 0.69
SDF4-206ENST00000478938 TSPAN6O43657 245 aa19.33■□□□□ 0.69
SDF4-206ENST00000478938 CTAG2O75638 210 aa19.33■□□□□ 0.69
SDF4-206ENST00000478938 HMGN2P05204 90 aaKnown RBP19.33■□□□□ 0.69
SDF4-206ENST00000478938 CTSHP09668 335 aa19.33■□□□□ 0.69
SDF4-206ENST00000478938 SLC26A5P58743 744 aa19.33■□□□□ 0.69
SDF4-206ENST00000478938 NANOS3P60323 173 aaKnown RBP19.33■□□□□ 0.69
SDF4-206ENST00000478938 ALG11Q2TAA5 492 aa19.33■□□□□ 0.69
SDF4-206ENST00000478938 KHDC3LQ587J8 217 aa19.33■□□□□ 0.69
SDF4-206ENST00000478938 ZNF385CQ66K41 422 aaPredicted RBP19.33■□□□□ 0.69
SDF4-206ENST00000478938 TMEM173Q86WV6 379 aaPredicted RBP19.33■□□□□ 0.69
SDF4-206ENST00000478938 WBP2Q969T9 261 aa19.33■□□□□ 0.69
SDF4-206ENST00000478938 SPACA1Q9HBV2 294 aa19.33■□□□□ 0.69
SDF4-206ENST00000478938 CXXC1Q9P0U4 656 aaPredicted RBP19.33■□□□□ 0.69
SDF4-206ENST00000478938 TRAV27A0A087WT01 109 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 TBC1D3DA0A087WVF3 549 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 TBC1D3IA0A087WXS9 549 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 TBC1D3EA0A087X179 549 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 TBC1D3KA0A087X1G2 549 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 C13orf42A0A1B0GVH6 325 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 TBC1D3FA6NER0 549 aaPredicted RBP19.33■□□□□ 0.68
SDF4-206ENST00000478938 TBC1D3LB9A6J9 549 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 BNIP3LO60238 219 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 ZFPL1O95159 310 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 MAS1P04201 325 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 C6P13671 934 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 ELNP15502 786 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 PBLDP30039 288 aaPredicted RBP19.33■□□□□ 0.68
SDF4-206ENST00000478938 PRSS3P35030 304 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 ZNF84P51523 738 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 CLDN2P57739 230 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 ACTA2P62736 377 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 ACTG2P63267 376 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 TNFRSF9Q07011 255 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 BIKQ13323 160 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 PPP1R1AQ13522 171 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 NKPD1Q17RQ9 610 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 TBC1D3CQ6IPX1 549 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 WDR88Q6ZMY6 472 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 TMPRSS11FQ6ZWK6 438 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 ANKRD33Q7Z3H0 272 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 TBC1D3Q8IZP1 549 aaPredicted RBP19.33■□□□□ 0.68
SDF4-206ENST00000478938 OR9A2Q8NGT5 310 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 CASTOR1Q8WTX7 329 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 POTEKPQ9BYX7 375 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 GPR62Q9BZJ7 368 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 METTL9Q9H1A3 318 aa19.33■□□□□ 0.68
SDF4-206ENST00000478938 FARSAQ9Y285 508 aaKnown RBP19.33■□□□□ 0.68
SDF4-206ENST00000478938 DENND4CQ5VZ89 1909 aa19.32■□□□□ 0.68
SDF4-206ENST00000478938 WNT11O96014 354 aa19.32■□□□□ 0.68
SDF4-206ENST00000478938 MAOAP21397 527 aa19.32■□□□□ 0.68
SDF4-206ENST00000478938 PSMB6P28072 239 aa19.32■□□□□ 0.68
SDF4-206ENST00000478938 FRKP42685 505 aaPredicted RBP19.32■□□□□ 0.68
SDF4-206ENST00000478938 PNLIPRP3Q17RR3 467 aa19.32■□□□□ 0.68
SDF4-206ENST00000478938 ODF4Q2M2E3 257 aa19.32■□□□□ 0.68
SDF4-206ENST00000478938 BTNL8Q6UX41 500 aa19.32■□□□□ 0.68
SDF4-206ENST00000478938 NRROSQ86YC3 692 aa19.32■□□□□ 0.68
SDF4-206ENST00000478938 C2orf73Q8N5S3 287 aaPredicted RBP19.32■□□□□ 0.68
SDF4-206ENST00000478938 FGF13Q92913 245 aa19.32■□□□□ 0.68
SDF4-206ENST00000478938 TMEM159Q96B96 161 aa19.32■□□□□ 0.68
SDF4-206ENST00000478938 MOAP1Q96BY2 351 aa19.32■□□□□ 0.68
SDF4-206ENST00000478938 MOGAT1Q96PD6 335 aa19.32■□□□□ 0.68
SDF4-206ENST00000478938 WIF1Q9Y5W5 379 aa19.32■□□□□ 0.68
SDF4-206ENST00000478938 SOD3P08294 240 aa19.32■□□□□ 0.68
SDF4-206ENST00000478938 NXPE4Q6UWF7 544 aa19.32■□□□□ 0.68
SDF4-206ENST00000478938 CHST9Q7L1S5 443 aa19.32■□□□□ 0.68
SDF4-206ENST00000478938 FAM219AQ8IW50 185 aa19.32■□□□□ 0.68
SDF4-206ENST00000478938 SYS1Q8N2H4 156 aa19.32■□□□□ 0.68
SDF4-206ENST00000478938 WFDC5Q8TCV5 224 aa19.32■□□□□ 0.68
SDF4-206ENST00000478938 ASB17Q8WXJ9 295 aa19.32■□□□□ 0.68
SDF4-206ENST00000478938 SCAMP4Q969E2 229 aa19.32■□□□□ 0.68
SDF4-206ENST00000478938 ZNF426Q9BUY5 554 aa19.32■□□□□ 0.68
SDF4-206ENST00000478938 PTGES2Q9H7Z7 377 aa19.32■□□□□ 0.68
SDF4-206ENST00000478938 ZNF281Q9Y2X9 895 aa19.32■□□□□ 0.68
SDF4-206ENST00000478938 A0A0G2JN53 185 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 C5orf51A6NDU8 294 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 GLCEO94923 617 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 TBX6O95947 436 aaPredicted RBP19.31■□□□□ 0.68
SDF4-206ENST00000478938 CRHP06850 196 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 SFTPBP07988 381 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 MELTFP08582 738 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 NHLH2Q02577 135 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 DUSP5Q16690 384 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 HEPN1Q6WQI6 88 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 SEMA6DQ8NFY4 1073 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 OR51D1Q8NGF3 324 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 OR51A7Q8NH64 312 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 SUSD6Q92537 303 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 GAL3ST3Q96A11 431 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 ZNF775Q96BV0 537 aaPredicted RBP19.31■□□□□ 0.68
SDF4-206ENST00000478938 WDR34Q96EX3 536 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 SLC25A21Q9BQT8 299 aaPredicted RBP19.31■□□□□ 0.68
SDF4-206ENST00000478938 DUSP22Q9NRW4 184 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 KCNE5Q9UJ90 142 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 VSIG4Q9Y279 399 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 MMP24Q9Y5R2 645 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 TSPAN11A1L157 253 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms