RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 ZNF584Q8IVC4 421 aa11.35□□□□□ -0.59
VCL-205ENST00000478896 C11orf65Q8NCR3 313 aa11.35□□□□□ -0.59
VCL-205ENST00000478896 VANGL1Q8TAA9 524 aaPredicted RBP11.35□□□□□ -0.59
VCL-205ENST00000478896 FGFBP3Q8TAT2 258 aa11.35□□□□□ -0.59
VCL-205ENST00000478896 LRRC8CQ8TDW0 803 aa11.35□□□□□ -0.59
VCL-205ENST00000478896 ZNF418Q8TF45 676 aaPredicted RBP11.35□□□□□ -0.59
VCL-205ENST00000478896 TMEM54Q969K7 222 aa11.35□□□□□ -0.59
VCL-205ENST00000478896 TLCD1Q96CP7 247 aa11.35□□□□□ -0.59
VCL-205ENST00000478896 FAHD2AQ96GK7 314 aa11.35□□□□□ -0.59
VCL-205ENST00000478896 SH3GL3Q99963 347 aa11.35□□□□□ -0.59
VCL-205ENST00000478896 TMBIM4Q9HC24 238 aa11.35□□□□□ -0.59
VCL-205ENST00000478896 TMEM38BQ9NVV0 291 aa11.35□□□□□ -0.59
VCL-205ENST00000478896 TRBV5-3A0A0A0MS03 114 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 MCIDASD6RGH6 385 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 DHHO43323 396 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 FMO6PO60774 539 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 PNPP00491 289 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 PTHP01270 115 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 HIST1H2ABP04908 130 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 ANPEPP15144 967 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 CFPP27918 469 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 IDH3AP50213 366 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 CLRN1P58418 232 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 CCL8P80075 99 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 MYBPC1Q00872 1141 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 RUNX1T1Q06455 604 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 SLC36A2Q495M3 483 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 NHLRC1Q6VVB1 395 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 WDR88Q6ZMY6 472 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 HIST3H2AQ7L7L0 130 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 SLC16A14Q7RTX9 510 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 NANOGNBQ7Z5D8 188 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 TEX29Q8N6K0 151 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 SEMA6DQ8NFY4 1073 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 OR6T1Q8NGN1 323 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 SYNPRQ8TBG9 265 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 SLC26A7Q8TE54 656 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 ADAMTS16Q8TE57 1224 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 ZFAND2BQ8WV99 257 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 HIST1H2ACQ93077 130 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 SLC25A44Q96H78 314 aaPredicted RBP11.34□□□□□ -0.59
VCL-205ENST00000478896 ARHGDIGQ99819 225 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 CPPED1Q9BRF8 314 aaPredicted RBP11.34□□□□□ -0.59
VCL-205ENST00000478896 CCDC28BQ9BUN5 200 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 RACGAP1Q9H0H5 632 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 LRMDAQ9H2I8 198 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 C1orf198Q9H425 327 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 SLCO1B3Q9NPD5 702 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 HINT3Q9NQE9 182 aaKnown RBP11.34□□□□□ -0.59
VCL-205ENST00000478896 SLC7A7Q9UM01 511 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 GMEB1Q9Y692 573 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 ANK2Q01484 3957 aa11.34□□□□□ -0.59
VCL-205ENST00000478896 TRAV20A0A0B4J274 112 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 IQCMA0A1B0GVH7 501 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 C17orf100A8MU93 164 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 ERLIN1O75477 346 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 RP2O75695 350 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 BCL10O95999 233 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 CLPTM1O96005 669 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 IGHG1P01857 330 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 MT-ND5P03915 603 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 QDPRP09417 244 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 DRD4P21917 467 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 ZNF84P51523 738 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 ERVS71-1P61550 626 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 TEKQ02763 1124 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 MVKQ03426 396 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 PLP2Q04941 152 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 ZP4Q12836 540 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 DUSP7Q16829 419 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 AVPI1Q5T686 147 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 DPPA2Q7Z7J5 298 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 DHDDSQ86SQ9 333 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 PAQR4Q8N4S7 273 aaPredicted RBP11.33□□□□□ -0.6
VCL-205ENST00000478896 RBM15BQ8NDT2 890 aaKnown RBP11.33□□□□□ -0.6
VCL-205ENST00000478896 OR4K5Q8NGD3 323 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 OR1J2Q8NGS2 313 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 C11orf40Q8WZ69 217 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 RAB39BQ96DA2 213 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 TSPAN32Q96QS1 320 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 BCL2L14Q9BZR8 327 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 ZNF665Q9H7R5 613 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 DECR2Q9NUI1 292 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 SLCO1C1Q9NYB5 712 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 TAS2R5Q9NYW4 299 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 LEF1Q9UJU2 399 aaPredicted RBP11.33□□□□□ -0.6
VCL-205ENST00000478896 ZNF229Q9UJW7 825 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 PCDHB10Q9UN67 800 aa11.33□□□□□ -0.6
VCL-205ENST00000478896 TRAPPC13A5PLN9 417 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 BLOC1S5-TXNDC5H3BN57 136 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 TRIM77I1YAP6 450 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 M0QX08 132 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 MPZL1O95297 269 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 PGA4P0DJD7 388 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 PGA3P0DJD8 388 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 CD247P20963 164 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 EPHA1P21709 976 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 CCNOP22674 350 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 APLNRP35414 380 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 RAD52P43351 418 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms