RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 CXCL12P48061 93 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 STARP49675 285 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 MEOX2P50222 304 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 MAP3K7CLP57077 242 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 DAOAP59103 153 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 RPL32P62910 135 aaKnown RBP2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 OTUD4Q01804 1114 aaKnown RBP2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 ASAH1Q13510 395 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 SERTAD2Q14140 314 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 GANABQ14697 944 aaKnown RBP2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 PDK3Q15120 406 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 GOLGA7BQ2TAP0 167 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 EOGTQ5NDL2 527 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 TMEM225Q6GV28 225 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 SYT10Q6XYQ8 523 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 Q6ZS52 159 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 ASCL5Q7RTU5 278 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 C16orf62Q7Z3J2 963 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 DHRSXQ8N5I4 330 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 STXBP6Q8NFX7 210 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 RHOXF1Q8NHV9 184 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 TRUB1Q8WWH5 349 aaKnown RBP2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 SHC3Q92529 594 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 SH3YL1Q96HL8 342 aaPredicted RBP2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 HSFY1Q96LI6 401 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 TGM7Q96PF1 710 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 XPO6Q96QU8 1125 aaKnown RBP2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 TUBGCP2Q9BSJ2 902 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 C19orf24Q9BVV8 132 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 IKZF5Q9H5V7 419 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 CAB39LQ9H9S4 337 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 PCSK1NQ9UHG2 260 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 PRO0461Q9UI25 63 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 ZNF107Q9UII5 783 aaPredicted RBP2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 RIMS3Q9UJD0 308 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 RPH3ALQ9UNE2 315 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 SLCO1B1Q9Y6L6 691 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 CFAP54Q96N23 3096 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 MYO15AQ9UKN7 3530 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 H3BMQ9 156 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 M0QYV0 167 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 ARPC3O15145 178 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 TAPBPO15533 448 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 MTX2O75431 263 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 UGT2B17O75795 530 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 CA1P00915 261 aaPredicted RBP2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 IGLV3-25P01717 112 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 IGLV3-27P01718 113 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 RETP07949 1114 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 STSP08842 583 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 ZNF44P15621 663 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 SERPINA2P20848 420 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 ZP3P21754 424 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 GDF1P27539 372 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 DHPSP49366 369 aaPredicted RBP2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 YWHAGP61981 247 aaKnown RBP eCLIP2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 MRPS11P82912 194 aaKnown RBP2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 KDSRQ06136 332 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 DMTNQ08495 405 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 ADIGQ0VDE8 80 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 DMC1Q14565 340 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 PRR4Q16378 134 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 EXOC3L4Q17RC7 722 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 C10orf120Q5SQS8 335 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 CCDC183Q5T5S1 534 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 OR5M10Q6IEU7 315 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 KDELC1Q6UW63 502 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 SCD5Q86SK9 330 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 ZNF677Q86XU0 584 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 BBS7Q8IWZ6 715 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 ZCCHC7Q8N3Z6 543 aaKnown RBP2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 C12orf29Q8N999 325 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 OR4D5Q8NGN0 318 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 OR13F1Q8NGS4 319 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 MRAPQ8TCY5 172 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 PIGCQ92535 297 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 PELI1Q96FA3 418 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 SLC41A3Q96GZ6 507 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 COQ2Q96H96 371 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 CELF6Q96J87 481 aaKnown RBP2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 SERPINB11Q96P15 392 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 MCHR1Q99705 422 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 TSSK1BQ9BXA7 367 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 ULBP1Q9BZM6 244 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 GLIPR2Q9H4G4 154 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 APMAPQ9HDC9 416 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 UFSP2Q9NUQ7 469 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 SIGLEC8Q9NYZ4 499 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 XPO7Q9UIA9 1087 aaKnown RBP2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 STOML2Q9UJZ1 356 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 ALG6Q9Y672 507 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 GPR179Q6PRD1 2367 aa2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 GOLGA4Q13439 2230 aaKnown RBP2.97□□□□□ -1.93
CDC42BPA-212ENST00000478573 FRYLO94915 3013 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 ZFHX2Q9C0A1 2572 aaPredicted RBP2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 UQCRHLA0A096LP55 91 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 G3V4G9 280 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 K7EQS6 105 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 RTL8CO15255 209 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 ATP8B1O43520 1251 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms