RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 MID1IP1Q9NPA3 183 aa0.36□□□□□ -2.35
NCKAP1-204ENST00000477988 GIN1Q9NXP7 522 aa0.36□□□□□ -2.35
NCKAP1-204ENST00000477988 HOOK1Q9UJC3 728 aaKnown RBP0.36□□□□□ -2.35
NCKAP1-204ENST00000477988 B9D1Q9UPM9 204 aa0.36□□□□□ -2.35
NCKAP1-204ENST00000477988 GSTK1Q9Y2Q3 226 aa0.36□□□□□ -2.35
NCKAP1-204ENST00000477988 FANCIQ9NVI1 1328 aa0.36□□□□□ -2.35
NCKAP1-204ENST00000477988 BPY2O14599 106 aa0.35□□□□□ -2.35
NCKAP1-204ENST00000477988 CCDC22O60826 627 aa0.35□□□□□ -2.35
NCKAP1-204ENST00000477988 OR4F21O95013 312 aa0.35□□□□□ -2.35
NCKAP1-204ENST00000477988 H2BFMP0C1H6 154 aa0.35□□□□□ -2.35
NCKAP1-204ENST00000477988 CT62P0C5K7 136 aa0.35□□□□□ -2.35
NCKAP1-204ENST00000477988 CCDC130P13994 396 aa0.35□□□□□ -2.35
NCKAP1-204ENST00000477988 DTYMKP23919 212 aa0.35□□□□□ -2.35
NCKAP1-204ENST00000477988 HMGB2P26583 209 aaKnown RBP0.35□□□□□ -2.35
NCKAP1-204ENST00000477988 GCAP28676 217 aa0.35□□□□□ -2.35
NCKAP1-204ENST00000477988 DEFB103AP81534 67 aa0.35□□□□□ -2.35
NCKAP1-204ENST00000477988 SCRN3Q0VDG4 424 aa0.35□□□□□ -2.35
NCKAP1-204ENST00000477988 GGTA1PQ4G0N0 100 aa0.35□□□□□ -2.35
NCKAP1-204ENST00000477988 PCOTHQ58A44 107 aa0.35□□□□□ -2.35
NCKAP1-204ENST00000477988 SLC10A5Q5PT55 438 aa0.35□□□□□ -2.35
NCKAP1-204ENST00000477988 NIPAL3Q6P499 406 aa0.35□□□□□ -2.35
NCKAP1-204ENST00000477988 ABHD13Q7L211 337 aa0.35□□□□□ -2.35
NCKAP1-204ENST00000477988 SGPP2Q8IWX5 399 aa0.35□□□□□ -2.35
NCKAP1-204ENST00000477988 CLEC4FQ8N1N0 589 aa0.35□□□□□ -2.35
NCKAP1-204ENST00000477988 OXGR1Q96P68 337 aa0.35□□□□□ -2.35
NCKAP1-204ENST00000477988 NIPSNAP3BQ9BS92 247 aa0.35□□□□□ -2.35
NCKAP1-204ENST00000477988 C2orf40Q9H1Z8 148 aa0.35□□□□□ -2.35
NCKAP1-204ENST00000477988 LAMP5Q9UJQ1 280 aa0.35□□□□□ -2.35
NCKAP1-204ENST00000477988 CBY1Q9Y3M2 126 aa0.35□□□□□ -2.35
NCKAP1-204ENST00000477988 TSSC4Q9Y5U2 329 aaPredicted RBP0.35□□□□□ -2.35
NCKAP1-204ENST00000477988 CENPVL3A0A0U1RRI6 287 aa0.34□□□□□ -2.36
NCKAP1-204ENST00000477988 TCRBV9S1A1TA0A576 114 aa0.34□□□□□ -2.36
NCKAP1-204ENST00000477988 OR6C70A6NIJ9 312 aa0.34□□□□□ -2.36
NCKAP1-204ENST00000477988 H0YJW9 148 aa0.34□□□□□ -2.36
NCKAP1-204ENST00000477988 MANBAO00462 879 aa0.34□□□□□ -2.36
NCKAP1-204ENST00000477988 SLC2A5P22732 501 aa0.34□□□□□ -2.36
NCKAP1-204ENST00000477988 TDO2P48775 406 aa0.34□□□□□ -2.36
NCKAP1-204ENST00000477988 CASP4P49662 377 aa0.34□□□□□ -2.36
NCKAP1-204ENST00000477988 SUB1P53999 127 aaKnown RBP eCLIP0.34□□□□□ -2.36
NCKAP1-204ENST00000477988 ACTN3Q08043 901 aaPredicted RBP0.34□□□□□ -2.36
NCKAP1-204ENST00000477988 TTC19Q6DKK2 380 aaPredicted RBP0.34□□□□□ -2.36
NCKAP1-204ENST00000477988 ARL9Q6T311 187 aa0.34□□□□□ -2.36
NCKAP1-204ENST00000477988 PLET1Q6UQ28 207 aa0.34□□□□□ -2.36
NCKAP1-204ENST00000477988 MISPQ8IVT2 679 aa0.34□□□□□ -2.36
NCKAP1-204ENST00000477988 SLC35F2Q8IXU6 374 aa0.34□□□□□ -2.36
NCKAP1-204ENST00000477988 ZNF607Q96SK3 696 aa0.34□□□□□ -2.36
NCKAP1-204ENST00000477988 OSBPL10Q9BXB5 764 aa0.34□□□□□ -2.36
NCKAP1-204ENST00000477988 FN3KRPQ9HA64 309 aa0.34□□□□□ -2.36
NCKAP1-204ENST00000477988 VAT1LQ9HCJ6 419 aa0.34□□□□□ -2.36
NCKAP1-204ENST00000477988 ZNF469Q96JG9 3925 aaPredicted RBP0.34□□□□□ -2.36
NCKAP1-204ENST00000477988 RP1L1Q8IWN7 2480 aaPredicted RBP0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 KMT2DO14686 5537 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 CEACAM18A8MTB9 384 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 VPS26AO75436 327 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 ATP5LO75964 103 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 NDUFB10O96000 172 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 MT-ATP6P00846 226 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 CCDC192P0DO97 292 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 CASP14P31944 242 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 ADRA1AP35348 466 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 GPR6P46095 362 aaPredicted RBP0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 ZNF83P51522 516 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 PPP1CBP62140 327 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 VGLL4Q14135 290 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 DUSP7Q16829 419 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 FAM71F2Q6NXP2 309 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 UTS2BQ765I0 119 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 PLA2G4DQ86XP0 818 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 TMEM256Q8N2U0 113 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 SPANXA2-OT1Q8N9U9 137 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 LRRC75AQ8NAA5 344 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 NOXO1Q8NFA2 376 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 OR52H1Q8NGJ2 320 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 OR52B4Q8NGK2 314 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 OR4S2Q8NH73 311 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 UFD1Q92890 307 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 CABS1Q96KC9 395 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 IP6K3Q96PC2 410 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 CSPG4P5Q96PW8 444 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 RIT2Q99578 217 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 TMEM117Q9H0C3 514 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 OR52D1Q9H346 318 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 CGNQ9P2M7 1197 aaKnown RBP0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 EPS15L1Q9UBC2 864 aa0.33□□□□□ -2.36
NCKAP1-204ENST00000477988 LRP5LA4QPB2 252 aa0.32□□□□□ -2.36
NCKAP1-204ENST00000477988 A8MXQ7 604 aa0.32□□□□□ -2.36
NCKAP1-204ENST00000477988 C4orf51C9J302 202 aa0.32□□□□□ -2.36
NCKAP1-204ENST00000477988 CTAGE5O15320 804 aa0.32□□□□□ -2.36
NCKAP1-204ENST00000477988 NEBLO76041 1014 aa0.32□□□□□ -2.36
NCKAP1-204ENST00000477988 CAPN1P07384 714 aa0.32□□□□□ -2.36
NCKAP1-204ENST00000477988 PFN1P07737 140 aaKnown RBP0.32□□□□□ -2.36
NCKAP1-204ENST00000477988 OR8U9P0C7N5 309 aa0.32□□□□□ -2.36
NCKAP1-204ENST00000477988 FUT1P19526 365 aa0.32□□□□□ -2.36
NCKAP1-204ENST00000477988 PSMA2P25787 234 aa0.32□□□□□ -2.36
NCKAP1-204ENST00000477988 MAS1LP35410 378 aa0.32□□□□□ -2.36
NCKAP1-204ENST00000477988 CDKN1BP46527 198 aa0.32□□□□□ -2.36
NCKAP1-204ENST00000477988 P2RY1P47900 373 aa0.32□□□□□ -2.36
NCKAP1-204ENST00000477988 RFX3P48380 749 aa0.32□□□□□ -2.36
NCKAP1-204ENST00000477988 PRMT2P55345 433 aa0.32□□□□□ -2.36
NCKAP1-204ENST00000477988 ERVK-25P63136 954 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms