RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 OVOL2Q9BRP0 275 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 KATNB1Q9BVA0 655 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 ACTR6Q9GZN1 396 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 PCBD2Q9H0N5 130 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 CDC42EP4Q9H3Q1 356 aaKnown RBP3.68□□□□□ -1.82
VPS50-214ENST00000477935 PROK2Q9HC23 129 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 XAB2Q9HCS7 855 aaKnown RBP3.68□□□□□ -1.82
VPS50-214ENST00000477935 PNO1Q9NRX1 252 aaKnown RBP3.68□□□□□ -1.82
VPS50-214ENST00000477935 FAM114A2Q9NRY5 505 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 COPS7AQ9UBW8 275 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 RSPH14Q9UHP6 348 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 C15orf41Q9Y2V0 281 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 HEY1Q9Y5J3 304 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 SELENOKQ9Y6D0 94 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 CHCHD2Q9Y6H1 151 aaPredicted RBP3.68□□□□□ -1.82
VPS50-214ENST00000477935 A0A1B0GUS0 222 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 SLC22A20A6NK97 555 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 HAT1O14929 419 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 TGM6O95932 706 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 AGTP01019 485 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 SERPING1P05155 500 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 PSMB1P20618 241 aaKnown RBP3.67□□□□□ -1.82
VPS50-214ENST00000477935 CETN2P41208 172 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 ZNF140P52738 457 aaPredicted RBP3.67□□□□□ -1.82
VPS50-214ENST00000477935 GEMP55040 296 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 KRTAP10-3P60369 221 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 SRYQ05066 204 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 CHRNB3Q05901 458 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 PAX8Q06710 450 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 ASPHQ12797 758 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 BIKQ13323 160 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 MSLNQ13421 630 aaPredicted RBP3.67□□□□□ -1.82
VPS50-214ENST00000477935 RCN2Q14257 317 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 ZNF273Q14593 569 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 TPD52L1Q16890 204 aaPredicted RBP3.67□□□□□ -1.82
VPS50-214ENST00000477935 DEFB134Q4QY38 66 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 EIPR1Q53HC9 387 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 LBHQ53QV2 105 aaPredicted RBP3.67□□□□□ -1.82
VPS50-214ENST00000477935 PRAMEF20Q5VT98 475 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 TIGD3Q6B0B8 471 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 PID1Q7Z2X4 250 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 VSIG1Q86XK7 387 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 LMNTD2Q8IXW0 634 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 RCOR2Q8IZ40 523 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 Q8N377 158 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 METTL4Q8N3J2 472 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 TBC1D19Q8N5T2 526 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 LRTM2Q8N967 370 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.67□□□□□ -1.82
VPS50-214ENST00000477935 EXT2Q93063 718 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 OLFM3Q96PB7 478 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 PPP1R2P1Q96PQ5 205 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 RNF157Q96PX1 679 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 PANX3Q96QZ0 392 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 CCT8L2Q96SF2 557 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 EGLN3Q9H6Z9 239 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 NLE1Q9NVX2 485 aaPredicted RBP3.67□□□□□ -1.82
VPS50-214ENST00000477935 TAC3Q9UHF0 121 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 ELF5Q9UKW6 265 aaPredicted RBP3.67□□□□□ -1.82
VPS50-214ENST00000477935 MRPS33Q9Y291 106 aaKnown RBP3.67□□□□□ -1.82
VPS50-214ENST00000477935 FKBP7Q9Y680 259 aa3.67□□□□□ -1.82
VPS50-214ENST00000477935 PCLOQ9Y6V0 5065 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 UQCRHLA0A096LP55 91 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 ZNF860A6NHJ4 632 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 CCT8L1PA6NM43 557 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 B4DSR2 109 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 GOLGA8MH3BSY2 632 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 CTNSO60931 367 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 CBR3O75828 277 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 IFNA16P05015 189 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 FERP16591 822 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 TNNI3P19429 210 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 PTAFRP25105 342 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 PSMA3P25788 255 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 HSD17B3P37058 310 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 SSR1P43307 286 aaKnown RBP3.66□□□□□ -1.82
VPS50-214ENST00000477935 NPY4RP50391 375 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 UBA52P62987 128 aaKnown RBP3.66□□□□□ -1.82
VPS50-214ENST00000477935 RGS1Q08116 209 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 WASHC5Q12768 1159 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 TSTA3Q13630 321 aaPredicted RBP3.66□□□□□ -1.82
VPS50-214ENST00000477935 SERTAD2Q14140 314 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 RPS6KA1Q15418 735 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 ZNF239Q16600 458 aaKnown RBP3.66□□□□□ -1.82
VPS50-214ENST00000477935 EXOC3L2Q2M3D2 409 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 CCSMST1Q4G0I0 132 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 ARMC3Q5W041 872 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 OR4C11Q6IEV9 310 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 C11orf71Q6IPW1 123 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 ZNF544Q6NX49 715 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 GDPGP1Q6ZNW5 385 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 ZER1Q7Z7L7 766 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 MUC15Q8N387 334 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 SVOPLQ8N434 492 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 ZDHHC22Q8N966 263 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 MFSD9Q8NBP5 474 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 ZNF740Q8NDX6 193 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 FAM83FQ8NEG4 500 aaPredicted RBP3.66□□□□□ -1.82
VPS50-214ENST00000477935 OR10G3Q8NGC4 313 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms