RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 CD8BP10966 210 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 NR2C1P13056 603 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 PCYT1AP49585 367 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 FMODQ06828 376 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 ITGADQ13349 1161 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 HIST3H3Q16695 136 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 PHYHD1Q5SRE7 291 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 C6orf52Q5T4I8 152 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 UBE2J2Q8N2K1 259 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 TCEANCQ8N8B7 351 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 NPEPL1Q8NDH3 523 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 FNDC8Q8TC99 324 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 TFAP2CQ92754 450 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 ALKBH3Q96Q83 286 aaPredicted RBP14.3□□□□□ -0.12
VHL-203ENST00000477538 RBP7Q96R05 134 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 ZNF184Q99676 751 aaPredicted RBP14.3□□□□□ -0.12
VHL-203ENST00000477538 APOL4Q9BPW4 351 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 LINC00470Q9BZP3 86 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 SYT4Q9H2B2 425 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 PIGMQ9H3S5 423 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 FN3KQ9H479 309 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 B3GAT2Q9NPZ5 323 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 COQ3Q9NZJ6 369 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 UPB1Q9UBR1 384 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 GPR52Q9Y2T5 361 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 OR6C68A6NDL8 312 aa14.29□□□□□ -0.12
VHL-203ENST00000477538 PYCARD-AS1I3L0S3 204 aa14.29□□□□□ -0.12
VHL-203ENST00000477538 PRKYO43930 277 aa14.29□□□□□ -0.12
VHL-203ENST00000477538 CLIC3O95833 236 aa14.29□□□□□ -0.12
VHL-203ENST00000477538 QDPRP09417 244 aa14.29□□□□□ -0.12
VHL-203ENST00000477538 PAICSP22234 425 aaKnown RBP14.29□□□□□ -0.12
VHL-203ENST00000477538 IL18R1Q13478 541 aa14.29□□□□□ -0.12
VHL-203ENST00000477538 THEM4Q5T1C6 240 aa14.29□□□□□ -0.12
VHL-203ENST00000477538 ZNF691Q5VV52 312 aa14.29□□□□□ -0.12
VHL-203ENST00000477538 FBXW9Q5XUX1 488 aa14.29□□□□□ -0.12
VHL-203ENST00000477538 LIX1LQ8IVB5 337 aa14.29□□□□□ -0.12
VHL-203ENST00000477538 DEPDC4Q8N2C3 294 aa14.29□□□□□ -0.12
VHL-203ENST00000477538 ZNF610Q8N9Z0 462 aa14.29□□□□□ -0.12
VHL-203ENST00000477538 RELL2Q8NC24 303 aaPredicted RBP14.29□□□□□ -0.12
VHL-203ENST00000477538 OTULINQ96BN8 352 aa14.29□□□□□ -0.12
VHL-203ENST00000477538 NMD3Q96D46 503 aaKnown RBP14.29□□□□□ -0.12
VHL-203ENST00000477538 IL4I1Q96RQ9 567 aa14.29□□□□□ -0.12
VHL-203ENST00000477538 DDOQ99489 341 aa14.29□□□□□ -0.12
VHL-203ENST00000477538 ULBP2Q9BZM5 246 aa14.29□□□□□ -0.12
VHL-203ENST00000477538 OPN3Q9H1Y3 402 aaPredicted RBP14.29□□□□□ -0.12
VHL-203ENST00000477538 HINT3Q9NQE9 182 aaKnown RBP14.29□□□□□ -0.12
VHL-203ENST00000477538 RPRD1BQ9NQG5 326 aaKnown RBP14.29□□□□□ -0.12
VHL-203ENST00000477538 ASB6Q9NWX5 421 aa14.29□□□□□ -0.12
VHL-203ENST00000477538 MALT1Q9UDY8 824 aa14.29□□□□□ -0.12
VHL-203ENST00000477538 ERRFI1Q9UJM3 462 aaPredicted RBP14.29□□□□□ -0.12
VHL-203ENST00000477538 SLC5A6Q9Y289 635 aa14.29□□□□□ -0.12
VHL-203ENST00000477538 FAM183AA6NL82 134 aa14.28□□□□□ -0.12
VHL-203ENST00000477538 EEF1E1-BLOC1S5C9J1V9 151 aa14.28□□□□□ -0.12
VHL-203ENST00000477538 ZNF587BE7ETH6 402 aa14.28□□□□□ -0.12
VHL-203ENST00000477538 PRR23D1E9PI22 279 aaPredicted RBP14.28□□□□□ -0.12
VHL-203ENST00000477538 MSTNO14793 375 aa14.28□□□□□ -0.12
VHL-203ENST00000477538 EEF1E1O43324 174 aaKnown RBP14.28□□□□□ -0.12
VHL-203ENST00000477538 TLX2O43763 284 aaPredicted RBP14.28□□□□□ -0.12
VHL-203ENST00000477538 CNOT4O95628 575 aaKnown RBP14.28□□□□□ -0.12
VHL-203ENST00000477538 GNAO1P09471 354 aa14.28□□□□□ -0.12
VHL-203ENST00000477538 PRR23D2P0DMB1 279 aaPredicted RBP14.28□□□□□ -0.12
VHL-203ENST00000477538 CHRNB4P30926 498 aa14.28□□□□□ -0.12
VHL-203ENST00000477538 EFNB1P98172 346 aa14.28□□□□□ -0.12
VHL-203ENST00000477538 FAPQ12884 760 aa14.28□□□□□ -0.12
VHL-203ENST00000477538 PLBD1Q6P4A8 553 aa14.28□□□□□ -0.12
VHL-203ENST00000477538 LRFN4Q6PJG9 635 aa14.28□□□□□ -0.12
VHL-203ENST00000477538 LINGO2Q7L985 606 aa14.28□□□□□ -0.12
VHL-203ENST00000477538 CXXC5Q7LFL8 322 aaKnown RBP14.28□□□□□ -0.12
VHL-203ENST00000477538 ABHD12BQ7Z5M8 362 aaPredicted RBP14.28□□□□□ -0.12
VHL-203ENST00000477538 MRGPRGQ86SM5 289 aa14.28□□□□□ -0.12
VHL-203ENST00000477538 CPOQ8IVL8 374 aa14.28□□□□□ -0.12
VHL-203ENST00000477538 SETD9Q8NE22 299 aa14.28□□□□□ -0.12
VHL-203ENST00000477538 OR8J1Q8NGP2 316 aa14.28□□□□□ -0.12
VHL-203ENST00000477538 OR9Q1Q8NGQ5 310 aa14.28□□□□□ -0.12
VHL-203ENST00000477538 TMEM163Q8TC26 289 aa14.28□□□□□ -0.12
VHL-203ENST00000477538 ASB5Q8WWX0 329 aa14.28□□□□□ -0.12
VHL-203ENST00000477538 MCHR2Q969V1 340 aa14.28□□□□□ -0.12
VHL-203ENST00000477538 NUAK2Q9H093 628 aa14.28□□□□□ -0.12
VHL-203ENST00000477538 RERGLQ9H628 205 aa14.28□□□□□ -0.12
VHL-203ENST00000477538 MED20Q9H944 212 aa14.28□□□□□ -0.12
VHL-203ENST00000477538 GPR35Q9HC97 309 aa14.28□□□□□ -0.12
VHL-203ENST00000477538 ZNF226Q9NYT6 803 aa14.28□□□□□ -0.12
VHL-203ENST00000477538 RAB26Q9ULW5 256 aa14.28□□□□□ -0.12
VHL-203ENST00000477538 DCTN6O00399 190 aa14.27□□□□□ -0.13
VHL-203ENST00000477538 SLC16A7O60669 478 aa14.27□□□□□ -0.13
VHL-203ENST00000477538 CTLA4P16410 223 aa14.27□□□□□ -0.13
VHL-203ENST00000477538 CRABP1P29762 137 aa14.27□□□□□ -0.13
VHL-203ENST00000477538 ZNF133P52736 654 aaPredicted RBP14.27□□□□□ -0.13
VHL-203ENST00000477538 SLC25A1P53007 311 aa14.27□□□□□ -0.13
VHL-203ENST00000477538 IL5RAQ01344 420 aa14.27□□□□□ -0.13
VHL-203ENST00000477538 ROR2Q01974 943 aaKnown RBP14.27□□□□□ -0.13
VHL-203ENST00000477538 DNM1P34Q6PK57 102 aa14.27□□□□□ -0.13
VHL-203ENST00000477538 SLC25A47Q6Q0C1 308 aa14.27□□□□□ -0.13
VHL-203ENST00000477538 Q6ZT83 130 aa14.27□□□□□ -0.13
VHL-203ENST00000477538 BEND4Q6ZU67 534 aa14.27□□□□□ -0.13
VHL-203ENST00000477538 USP51Q70EK9 711 aa14.27□□□□□ -0.13
VHL-203ENST00000477538 LUZP2Q86TE4 346 aa14.27□□□□□ -0.13
VHL-203ENST00000477538 ENTHD1Q8IYW4 607 aa14.27□□□□□ -0.13
VHL-203ENST00000477538 C8orf59Q8N0T1 100 aaPredicted RBP14.27□□□□□ -0.13
VHL-203ENST00000477538 TRUB1Q8WWH5 349 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms