RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 RGS7BPQ6MZT1 257 aaPredicted RBP9.74□□□□□ -0.85
HDLBP-236ENST00000477477 LRFN4Q6PJG9 635 aa9.74□□□□□ -0.85
HDLBP-236ENST00000477477 PATL1Q86TB9 770 aaKnown RBP9.74□□□□□ -0.85
HDLBP-236ENST00000477477 RETREG3Q86VR2 466 aa9.74□□□□□ -0.85
HDLBP-236ENST00000477477 TSPYL5Q86VY4 417 aaPredicted RBP9.74□□□□□ -0.85
HDLBP-236ENST00000477477 SLC30A8Q8IWU4 369 aa9.74□□□□□ -0.85
HDLBP-236ENST00000477477 LRRC17Q8N6Y2 441 aa9.74□□□□□ -0.85
HDLBP-236ENST00000477477 SLC30A7Q8NEW0 376 aa9.74□□□□□ -0.85
HDLBP-236ENST00000477477 VANGL1Q8TAA9 524 aaPredicted RBP9.74□□□□□ -0.85
HDLBP-236ENST00000477477 YIPF5Q969M3 257 aa9.74□□□□□ -0.85
HDLBP-236ENST00000477477 MPP4Q96JB8 637 aa9.74□□□□□ -0.85
HDLBP-236ENST00000477477 ATP6V1G3Q96LB4 118 aa9.74□□□□□ -0.85
HDLBP-236ENST00000477477 SH3GL3Q99963 347 aa9.74□□□□□ -0.85
HDLBP-236ENST00000477477 ZNF416Q9BWM5 594 aa9.74□□□□□ -0.85
HDLBP-236ENST00000477477 SLC19A3Q9BZV2 496 aa9.74□□□□□ -0.85
HDLBP-236ENST00000477477 PCDHAC1Q9H158 963 aa9.74□□□□□ -0.85
HDLBP-236ENST00000477477 ZNF385DQ9H6B1 395 aa9.74□□□□□ -0.85
HDLBP-236ENST00000477477 NARFLQ9H6Q4 476 aa9.74□□□□□ -0.85
HDLBP-236ENST00000477477 KAT8Q9H7Z6 458 aaKnown RBP9.74□□□□□ -0.85
HDLBP-236ENST00000477477 ZNF275Q9NSD4 429 aaPredicted RBP9.74□□□□□ -0.85
HDLBP-236ENST00000477477 DUSP13Q9UII6 198 aa9.74□□□□□ -0.85
HDLBP-236ENST00000477477 ZNF229Q9UJW7 825 aa9.74□□□□□ -0.85
HDLBP-236ENST00000477477 ZNF346Q9UL40 294 aaKnown RBP9.74□□□□□ -0.85
HDLBP-236ENST00000477477 NDUFAF1Q9Y375 327 aa9.74□□□□□ -0.85
HDLBP-236ENST00000477477 SLC22A23A1A5C7 686 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 FAM157AC9JC47 383 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 WNT9BO14905 357 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 ANGPT2O15123 496 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 RP2O75695 350 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 FARS2O95363 451 aaKnown RBP9.73□□□□□ -0.85
HDLBP-236ENST00000477477 BCL10O95999 233 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 IGHG1P01857 330 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 HIST1H2ABP04908 130 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 MSMBP08118 114 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 QDPRP09417 244 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 ASAH2BP0C7U1 165 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 FAM157BP0CG42 384 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 UMPSP11172 480 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 TMEM33P57088 247 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 NFYCQ13952 458 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 NKPD1Q17RQ9 610 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 ALKBH6Q3KRA9 238 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 NRN1LQ496H8 165 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 TTMPQ5BVD1 217 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 TMEM53Q6P2H8 277 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 DEF8Q6ZN54 512 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 HIST3H2AQ7L7L0 130 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 NANOGNBQ7Z5D8 188 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 DPPA2Q7Z7J5 298 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 MEX3DQ86XN8 651 aaKnown RBP9.73□□□□□ -0.85
HDLBP-236ENST00000477477 PAQR4Q8N4S7 273 aaPredicted RBP9.73□□□□□ -0.85
HDLBP-236ENST00000477477 OR4K5Q8NGD3 323 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 DYDC1Q8WWB3 177 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 HIST1H2ACQ93077 130 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 TMEM186Q96B77 213 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 TAMM41Q96BW9 452 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 C1orf198Q9H425 327 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 RNF121Q9H920 327 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 CDH20Q9HBT6 801 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 HIF1ANQ9NWT6 349 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 TRIM33Q9UPN9 1127 aa9.73□□□□□ -0.85
HDLBP-236ENST00000477477 IGLV3-9A0A075B6K5 115 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 PPIHO43447 177 aaKnown RBP9.72□□□□□ -0.85
HDLBP-236ENST00000477477 SNAP29O95721 258 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 VIMP08670 466 aaKnown RBP9.72□□□□□ -0.85
HDLBP-236ENST00000477477 GAAP10253 952 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 CCL2P13500 99 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 MAGEB1P43366 347 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 CRYBA2P53672 197 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 KLF3P57682 345 aaPredicted RBP9.72□□□□□ -0.85
HDLBP-236ENST00000477477 CLRN1P58418 232 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 SELENOVP59797 346 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 RUNX1T1Q06455 604 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 HIST3H3Q16695 136 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 TBC1D28Q2M2D7 210 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 SLC36A2Q495M3 483 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 INTS11Q5TA45 600 aaKnown RBP9.72□□□□□ -0.85
HDLBP-236ENST00000477477 SLC16A14Q7RTX9 510 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 NOXO1Q8NFA2 376 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 OR51F2Q8NH61 342 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 OR10A6Q8NH74 314 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 SLC26A7Q8TE54 656 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 TSPEARQ8WU66 669 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 MCHR2Q969V1 340 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 THOC1Q96FV9 657 aaKnown RBP9.72□□□□□ -0.85
HDLBP-236ENST00000477477 TSPAN32Q96QS1 320 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 ZNF347Q96SE7 839 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 SEPHS2Q99611 448 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 PRSS27Q9BQR3 290 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 OR51B6Q9H340 312 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 METTL17Q9H7H0 456 aaPredicted RBP9.72□□□□□ -0.85
HDLBP-236ENST00000477477 LPAR2Q9HBW0 351 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 MEPEQ9NQ76 525 aaPredicted RBP9.72□□□□□ -0.85
HDLBP-236ENST00000477477 HINT3Q9NQE9 182 aaKnown RBP9.72□□□□□ -0.85
HDLBP-236ENST00000477477 TREM2Q9NZC2 230 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 TAAR3PQ9P1P4 343 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 GPR160Q9UJ42 338 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 METRNQ9UJH8 293 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 GRIP1Q9Y3R0 1128 aa9.72□□□□□ -0.85
HDLBP-236ENST00000477477 A0A0A6YYJ9 748 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms