RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 TMEM27Q9HBJ8 222 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 ARFGEF3Q5TH69 2177 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 LOC102725191A0A1B0GVB3 256 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 ZNF99A8MXY4 864 aaPredicted RBP6.27□□□□□ -1.4
BRCA1-214ENST00000477152 M0R233 179 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 SYNGR3O43761 229 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 ZNF432O94892 652 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 UBL3O95164 117 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 OR6A2O95222 327 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 RAB36O95755 333 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 PTHP01270 115 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 TFP02787 698 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 MT-ND5P03915 603 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 TACSTD2P09758 323 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 GKN3PP0CG01 181 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 ETS2P15036 469 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 BGNP21810 368 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 ARRB2P32121 409 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 ACAA2P42765 397 aaKnown RBP6.27□□□□□ -1.4
BRCA1-214ENST00000477152 RPS5P46782 204 aaKnown RBP6.27□□□□□ -1.4
BRCA1-214ENST00000477152 SLC6A9P48067 706 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 CDH15P55291 814 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 ARF1P84077 181 aaKnown RBP6.27□□□□□ -1.4
BRCA1-214ENST00000477152 SLC25A3Q00325 362 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 NPRL3Q12980 569 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 FAM91A1Q658Y4 838 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 ULK3Q6PHR2 472 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 UNQ6126/PRO20091Q6UXV3 157 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 DPPA2Q7Z7J5 298 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 HMGN2P46Q86SG4 172 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 VRK2Q86Y07 508 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 PNPT1Q8TCS8 783 aaKnown RBP6.27□□□□□ -1.4
BRCA1-214ENST00000477152 ZNF418Q8TF45 676 aaPredicted RBP6.27□□□□□ -1.4
BRCA1-214ENST00000477152 AENQ8WTP8 325 aaKnown RBP6.27□□□□□ -1.4
BRCA1-214ENST00000477152 SLC47A1Q96FL8 570 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 ZNF607Q96SK3 696 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 ZNF416Q9BWM5 594 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 LRMDAQ9H2I8 198 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 CRLF2Q9HC73 371 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 BCL2L10Q9HD36 194 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 ING3Q9NXR8 418 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 NKIRAS1Q9NYS0 192 aa6.27□□□□□ -1.4
BRCA1-214ENST00000477152 DSPPQ9NZW4 1301 aa6.27□□□□□ -1.41
BRCA1-214ENST00000477152 ALPK2Q86TB3 2170 aa6.27□□□□□ -1.41
BRCA1-214ENST00000477152 ZANQ9Y493 2812 aa6.27□□□□□ -1.41
BRCA1-214ENST00000477152 TRAV36DV7A0A075B6V5 113 aa6.27□□□□□ -1.41
BRCA1-214ENST00000477152 IGHV4-61A0A0C4DH41 118 aa6.27□□□□□ -1.41
BRCA1-214ENST00000477152 MGRN1O60291 552 aa6.27□□□□□ -1.41
BRCA1-214ENST00000477152 BCAS1O75363 584 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-214ENST00000477152 SERPINB7O75635 380 aa6.27□□□□□ -1.41
BRCA1-214ENST00000477152 PRKAR1BP31321 381 aa6.27□□□□□ -1.41
BRCA1-214ENST00000477152 THBS4P35443 961 aa6.27□□□□□ -1.41
BRCA1-214ENST00000477152 POLR2JP52435 117 aaKnown RBP6.27□□□□□ -1.41
BRCA1-214ENST00000477152 VSNL1P62760 191 aa6.27□□□□□ -1.41
BRCA1-214ENST00000477152 BNIP2Q12982 314 aa6.27□□□□□ -1.41
BRCA1-214ENST00000477152 SNTB2Q13425 540 aaKnown RBP6.27□□□□□ -1.41
BRCA1-214ENST00000477152 GSG1Q2KHT4 349 aa6.27□□□□□ -1.41
BRCA1-214ENST00000477152 CEACAM16Q2WEN9 425 aa6.27□□□□□ -1.41
BRCA1-214ENST00000477152 RANBP3LQ86VV4 465 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-214ENST00000477152 EPHX4Q8IUS5 362 aa6.27□□□□□ -1.41
BRCA1-214ENST00000477152 SCAIQ8N9R8 606 aa6.27□□□□□ -1.41
BRCA1-214ENST00000477152 SLC38A5Q8WUX1 472 aa6.27□□□□□ -1.41
BRCA1-214ENST00000477152 TMEM19Q96HH6 336 aa6.27□□□□□ -1.41
BRCA1-214ENST00000477152 SORT1Q99523 831 aa6.27□□□□□ -1.41
BRCA1-214ENST00000477152 DOK1Q99704 481 aa6.27□□□□□ -1.41
BRCA1-214ENST00000477152 C1orf198Q9H425 327 aa6.27□□□□□ -1.41
BRCA1-214ENST00000477152 GPR35Q9HC97 309 aa6.27□□□□□ -1.41
BRCA1-214ENST00000477152 A4GALTQ9NPC4 353 aa6.27□□□□□ -1.41
BRCA1-214ENST00000477152 RLIMQ9NVW2 624 aa6.27□□□□□ -1.41
BRCA1-214ENST00000477152 ATRQ13535 2644 aa6.27□□□□□ -1.41
BRCA1-214ENST00000477152 EVPLLA8MZ36 301 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 SDHDO14521 159 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 UBDO15205 165 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 NPIPB7O75200 414 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 UPK3AO75631 287 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 LY6HO94772 140 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 FARS2O95363 451 aaKnown RBP6.26□□□□□ -1.41
BRCA1-214ENST00000477152 CD79AP11912 226 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 ETFAP13804 333 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 ACHEP22303 614 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 GLRXP35754 106 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 CDKN2CP42773 168 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 GPR6P46095 362 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-214ENST00000477152 TMEM33P57088 247 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 MRPS11P82912 194 aaKnown RBP6.26□□□□□ -1.41
BRCA1-214ENST00000477152 BST1Q10588 318 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 CAMK2DQ13557 499 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 ALG10BQ5I7T1 473 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 CEP85LQ5SZL2 805 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 C6orf89Q6UWU4 347 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 SVOPLQ8N434 492 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 C10orf53Q8N6V4 93 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 ARIH2OSQ8N7S6 290 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 LSMEM1Q8N8F7 131 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 OR1J2Q8NGS2 313 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 OR6N1Q8NGY5 312 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 SNX33Q8WV41 574 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 RDH5Q92781 318 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 ZNF385DQ9H6B1 395 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 PNPOQ9NVS9 261 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms