RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 A6NIZ1 184 aa12.88□□□□□ -0.35
COL4A6-206ENST00000477085 E9PI62 339 aa12.88□□□□□ -0.35
COL4A6-206ENST00000477085 CXCL13O43927 109 aa12.88□□□□□ -0.35
COL4A6-206ENST00000477085 EIF1BO60739 113 aaKnown RBP12.88□□□□□ -0.35
COL4A6-206ENST00000477085 MPZL1O95297 269 aa12.88□□□□□ -0.35
COL4A6-206ENST00000477085 OR2T7P0C7T2 308 aa12.88□□□□□ -0.35
COL4A6-206ENST00000477085 RPS27P42677 84 aaKnown RBP12.88□□□□□ -0.35
COL4A6-206ENST00000477085 CLDN18P56856 261 aa12.88□□□□□ -0.35
COL4A6-206ENST00000477085 OR12D2P58182 307 aa12.88□□□□□ -0.35
COL4A6-206ENST00000477085 RAP1BP61224 184 aa12.88□□□□□ -0.35
COL4A6-206ENST00000477085 VBP1P61758 197 aa12.88□□□□□ -0.35
COL4A6-206ENST00000477085 NCS1P62166 190 aa12.88□□□□□ -0.35
COL4A6-206ENST00000477085 RAP1AP62834 184 aa12.88□□□□□ -0.35
COL4A6-206ENST00000477085 CSNK2A1P68400 391 aaPredicted RBP12.88□□□□□ -0.35
COL4A6-206ENST00000477085 SLC17A1Q14916 467 aa12.88□□□□□ -0.35
COL4A6-206ENST00000477085 LIPKQ5VXJ0 399 aa12.88□□□□□ -0.35
COL4A6-206ENST00000477085 ASB18Q6ZVZ8 466 aa12.88□□□□□ -0.35
COL4A6-206ENST00000477085 CREB3L2Q70SY1 520 aa12.88□□□□□ -0.35
COL4A6-206ENST00000477085 SPACA3Q8IXA5 215 aa12.88□□□□□ -0.35
COL4A6-206ENST00000477085 ZIC4Q8N9L1 334 aa12.88□□□□□ -0.35
COL4A6-206ENST00000477085 OR2T27Q8NH04 317 aa12.88□□□□□ -0.35
COL4A6-206ENST00000477085 OR10D3Q8NH80 312 aa12.88□□□□□ -0.35
COL4A6-206ENST00000477085 OR2V1Q8NHB1 315 aa12.88□□□□□ -0.35
COL4A6-206ENST00000477085 ZNF845Q96IR2 970 aaPredicted RBP12.88□□□□□ -0.35
COL4A6-206ENST00000477085 RNF167Q9H6Y7 350 aa12.88□□□□□ -0.35
COL4A6-206ENST00000477085 MARCH7Q9H992 704 aa12.88□□□□□ -0.35
COL4A6-206ENST00000477085 INPP5EQ9NRR6 644 aa12.88□□□□□ -0.35
COL4A6-206ENST00000477085 MRPL22Q9NWU5 206 aaKnown RBP12.88□□□□□ -0.35
COL4A6-206ENST00000477085 RASD1Q9Y272 281 aa12.88□□□□□ -0.35
COL4A6-206ENST00000477085 CCRL2O00421 344 aa12.87□□□□□ -0.35
COL4A6-206ENST00000477085 PDGFAP04085 211 aa12.87□□□□□ -0.35
COL4A6-206ENST00000477085 PGA4P0DJD7 388 aa12.87□□□□□ -0.35
COL4A6-206ENST00000477085 PGA3P0DJD8 388 aa12.87□□□□□ -0.35
COL4A6-206ENST00000477085 CPEP16870 476 aa12.87□□□□□ -0.35
COL4A6-206ENST00000477085 NTF4P34130 210 aa12.87□□□□□ -0.35
COL4A6-206ENST00000477085 EIF2S3P41091 472 aaKnown RBP12.87□□□□□ -0.35
COL4A6-206ENST00000477085 CAMK2DQ13557 499 aa12.87□□□□□ -0.35
COL4A6-206ENST00000477085 C1DQ13901 141 aaKnown RBP12.87□□□□□ -0.35
COL4A6-206ENST00000477085 VASNQ6EMK4 673 aa12.87□□□□□ -0.35
COL4A6-206ENST00000477085 KLBQ86Z14 1044 aa12.87□□□□□ -0.35
COL4A6-206ENST00000477085 TMEM178AQ8NBL3 297 aa12.87□□□□□ -0.35
COL4A6-206ENST00000477085 ROBO4Q8WZ75 1007 aa12.87□□□□□ -0.35
COL4A6-206ENST00000477085 TRMT61AQ96FX7 289 aaKnown RBP12.87□□□□□ -0.35
COL4A6-206ENST00000477085 ZNF385AQ96PM9 386 aaKnown RBP12.87□□□□□ -0.35
COL4A6-206ENST00000477085 RACGAP1Q9H0H5 632 aa12.87□□□□□ -0.35
COL4A6-206ENST00000477085 DEFB127Q9H1M4 99 aa12.87□□□□□ -0.35
COL4A6-206ENST00000477085 ACKR4Q9NPB9 350 aa12.87□□□□□ -0.35
COL4A6-206ENST00000477085 ISYNA1Q9NPH2 558 aa12.87□□□□□ -0.35
COL4A6-206ENST00000477085 COA3Q9Y2R0 106 aaPredicted RBP12.87□□□□□ -0.35
COL4A6-206ENST00000477085 SF3B6Q9Y3B4 125 aaKnown RBP12.87□□□□□ -0.35
COL4A6-206ENST00000477085 PNMA8CA0A1B0GUJ8 204 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 K7EM74 188 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 GPX5O75715 221 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 ZNF43P17038 809 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 PTGS2P35354 604 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 CRYBB2P43320 205 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 EIF1AXP47813 144 aaKnown RBP12.86□□□□□ -0.35
COL4A6-206ENST00000477085 RPS3AP61247 264 aaKnown RBP12.86□□□□□ -0.35
COL4A6-206ENST00000477085 ACSM1Q08AH1 577 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 NFATC3Q12968 1075 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 TPBGQ13641 420 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 FAM205BPQ63HN1 556 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 PLXDC2Q6UX71 529 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 SLC16A9Q7RTY1 509 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 ERI1Q8IV48 349 aaKnown RBP12.86□□□□□ -0.35
COL4A6-206ENST00000477085 FAM109AQ8N4B1 249 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 OR6X1Q8NH79 312 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 NDNFQ8TB73 568 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 C4orf36Q96KX1 117 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 NAA11Q9BSU3 229 aaPredicted RBP12.86□□□□□ -0.35
COL4A6-206ENST00000477085 DCUN1D5Q9BTE7 237 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 CENPOQ9BU64 300 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 NDUFB11Q9NX14 153 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 BABAM2Q9NXR7 383 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 PTTG2Q9NZH5 202 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 ING1Q9UK53 422 aaPredicted RBP12.86□□□□□ -0.35
COL4A6-206ENST00000477085 LINC01387J3KSC0 135 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 DNPH1O43598 174 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 AHCYL1O43865 530 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 AIREO43918 545 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 ZNF708P17019 499 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 ZNF182P17025 639 aaPredicted RBP12.86□□□□□ -0.35
COL4A6-206ENST00000477085 CLDN17P56750 224 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 ACTC1P68032 377 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 ACTA1P68133 377 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 SLC10A1Q14973 349 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 POU4F3Q15319 338 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 HIST3H3Q16695 136 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 MEP1BQ16820 701 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 ZNF684Q5T5D7 378 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 CARD17Q5XLA6 110 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 SLC22A16Q86VW1 577 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 CDC20BQ86Y33 519 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 OR9K2Q8NGE7 335 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 RNF166Q96A37 237 aaPredicted RBP12.86□□□□□ -0.35
COL4A6-206ENST00000477085 ZNF775Q96BV0 537 aaPredicted RBP12.86□□□□□ -0.35
COL4A6-206ENST00000477085 SLC25A44Q96H78 314 aaPredicted RBP12.86□□□□□ -0.35
COL4A6-206ENST00000477085 ZDHHC11Q9H8X9 412 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 QPCTLQ9NXS2 382 aa12.86□□□□□ -0.35
COL4A6-206ENST00000477085 ZNF716A6NP11 495 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms