RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 BIRC5O15392 142 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 THY1P04216 161 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 ZCCHC18P0CG32 403 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 ADORA3P0DMS8 318 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 MDKP21741 143 aaPredicted RBP10.14□□□□□ -0.79
HDAC6-219ENST00000476625 SCGB2A2Q13296 93 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 KRT71Q3SY84 523 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 PDCD4Q53EL6 469 aaKnown RBP10.14□□□□□ -0.79
HDAC6-219ENST00000476625 REP15Q6BDI9 236 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 SHISA2Q6UWI4 295 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 ZNF101Q8IZC7 436 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 LRRC18Q8N456 261 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 LSMEM1Q8N8F7 131 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 ANKRD42Q8N9B4 389 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 CPEB3Q8NE35 698 aaKnown RBP10.14□□□□□ -0.79
HDAC6-219ENST00000476625 DEFB108BQ8NET1 73 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 OR1J1Q8NGS3 322 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 BBS10Q8TAM1 723 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 AENQ8WTP8 325 aaKnown RBP10.14□□□□□ -0.79
HDAC6-219ENST00000476625 SNX33Q8WV41 574 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 IPCEF1Q8WWN9 437 aaPredicted RBP10.14□□□□□ -0.79
HDAC6-219ENST00000476625 GTF2H4Q92759 462 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 RAB39BQ96DA2 213 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 LRR1Q96L50 414 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 DCLRE1CQ96SD1 692 aaKnown RBP10.14□□□□□ -0.79
HDAC6-219ENST00000476625 ZNF347Q96SE7 839 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 RNF121Q9H920 327 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 C12orf10Q9HB07 376 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 CDH20Q9HBT6 801 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 BCL2L10Q9HD36 194 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 NPHS2Q9NP85 383 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 MRPL39Q9NYK5 338 aaKnown RBP10.14□□□□□ -0.79
HDAC6-219ENST00000476625 TAS2R5Q9NYW4 299 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 GLTPQ9NZD2 209 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.14□□□□□ -0.79
HDAC6-219ENST00000476625 V9GYY5 206 aaPredicted RBP10.14□□□□□ -0.79
HDAC6-219ENST00000476625 WNK2Q9Y3S1 2297 aa10.13□□□□□ -0.79
HDAC6-219ENST00000476625 CLIC1O00299 241 aa10.13□□□□□ -0.79
HDAC6-219ENST00000476625 OPN1SWP03999 348 aa10.13□□□□□ -0.79
HDAC6-219ENST00000476625 IL6P05231 212 aa10.13□□□□□ -0.79
HDAC6-219ENST00000476625 CCNOP22674 350 aa10.13□□□□□ -0.79
HDAC6-219ENST00000476625 WNT5AP41221 380 aa10.13□□□□□ -0.79
HDAC6-219ENST00000476625 POLR2JP52435 117 aaKnown RBP10.13□□□□□ -0.79
HDAC6-219ENST00000476625 WDR4P57081 412 aaKnown RBP10.13□□□□□ -0.79
HDAC6-219ENST00000476625 RGS8P57771 180 aaPredicted RBP10.13□□□□□ -0.79
HDAC6-219ENST00000476625 NPTX1Q15818 432 aa10.13□□□□□ -0.79
HDAC6-219ENST00000476625 LEG1Q6P5S2 330 aa10.13□□□□□ -0.79
HDAC6-219ENST00000476625 ULK3Q6PHR2 472 aa10.13□□□□□ -0.79
HDAC6-219ENST00000476625 SLC35D2Q76EJ3 337 aa10.13□□□□□ -0.79
HDAC6-219ENST00000476625 RBM45Q8IUH3 476 aaKnown RBP10.13□□□□□ -0.79
HDAC6-219ENST00000476625 SCAIQ8N9R8 606 aa10.13□□□□□ -0.79
HDAC6-219ENST00000476625 OR4D11Q8NGI4 311 aa10.13□□□□□ -0.79
HDAC6-219ENST00000476625 OR5J2Q8NH18 312 aa10.13□□□□□ -0.79
HDAC6-219ENST00000476625 SLC47A1Q96FL8 570 aa10.13□□□□□ -0.79
HDAC6-219ENST00000476625 ITCHQ96J02 903 aa10.13□□□□□ -0.79
HDAC6-219ENST00000476625 ROPN1BQ9BZX4 212 aaPredicted RBP10.13□□□□□ -0.79
HDAC6-219ENST00000476625 CENPHQ9H3R5 247 aa10.13□□□□□ -0.79
HDAC6-219ENST00000476625 SAP30LQ9HAJ7 183 aa10.13□□□□□ -0.79
HDAC6-219ENST00000476625 ROPN1Q9HAT0 212 aaPredicted RBP10.13□□□□□ -0.79
HDAC6-219ENST00000476625 CACYBPQ9HB71 228 aaKnown RBP10.13□□□□□ -0.79
HDAC6-219ENST00000476625 KCNK9Q9NPC2 374 aa10.13□□□□□ -0.79
HDAC6-219ENST00000476625 DECR2Q9NUI1 292 aa10.13□□□□□ -0.79
HDAC6-219ENST00000476625 PRKDCP78527 4128 aaKnown RBP10.13□□□□□ -0.79
HDAC6-219ENST00000476625 IGKV1D-43A0A0B4J1Z2 117 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 CPSF4LA6NMK7 179 aaKnown RBP10.12□□□□□ -0.79
HDAC6-219ENST00000476625 C5orf58C9J3I9 102 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 J3QLI3 93 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 DHHO43323 396 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 UBOX5O94941 541 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 LYPD3O95274 346 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 GPANK1O95872 356 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 CH25HO95992 272 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 QDPRP09417 244 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 PGA4P0DJD7 388 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 PGA3P0DJD8 388 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 BMP2P12643 396 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 ANPEPP15144 967 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 PRKAR1BP31321 381 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 CDAP32320 146 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 LSP1P33241 339 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 ZNF81P51508 661 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 MMP15P51511 669 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 UCP2P55851 309 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 LRRC74AQ0VAA2 488 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 FOXL1Q12952 345 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 TUSC1Q2TAM9 212 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 HFEQ30201 348 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 CEP85LQ5SZL2 805 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 THEM4Q5T1C6 240 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 DHRS4L2Q6PKH6 230 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 RFPL4BQ6ZWI9 263 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 PIWIL3Q7Z3Z3 882 aaKnown RBP10.12□□□□□ -0.79
HDAC6-219ENST00000476625 NET1Q7Z628 596 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-219ENST00000476625 PXKQ7Z7A4 578 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 SMYD1Q8NB12 490 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 AKR7LQ8NHP1 331 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 ZNF519Q8TB69 540 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 TRIM44Q96DX7 344 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-219ENST00000476625 POFUT1Q9H488 388 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 ARMC7Q9H6L4 198 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms