RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 NAAAQ02083 359 aa14.06□□□□□ -0.16
COL1A1-205ENST00000476387 LOXL1Q08397 574 aaPredicted RBP14.06□□□□□ -0.16
COL1A1-205ENST00000476387 RRM2BQ7LG56 351 aa14.06□□□□□ -0.16
COL1A1-205ENST00000476387 MDP1Q86V88 176 aa14.06□□□□□ -0.16
COL1A1-205ENST00000476387 NRMQ8IXM6 262 aa14.06□□□□□ -0.16
COL1A1-205ENST00000476387 CDK20Q8IZL9 346 aa14.06□□□□□ -0.16
COL1A1-205ENST00000476387 FAM156AQ8NDB6 213 aa14.06□□□□□ -0.16
COL1A1-205ENST00000476387 RBM15BQ8NDT2 890 aaKnown RBP14.06□□□□□ -0.16
COL1A1-205ENST00000476387 NOXO1Q8NFA2 376 aa14.06□□□□□ -0.16
COL1A1-205ENST00000476387 ACOT11Q8WXI4 607 aaPredicted RBP14.06□□□□□ -0.16
COL1A1-205ENST00000476387 CCT8L2Q96SF2 557 aa14.06□□□□□ -0.16
COL1A1-205ENST00000476387 MDFIQ99750 246 aa14.06□□□□□ -0.16
COL1A1-205ENST00000476387 YAE1D1Q9NRH1 226 aa14.06□□□□□ -0.16
COL1A1-205ENST00000476387 MAN2C1Q9NTJ4 1040 aa14.06□□□□□ -0.16
COL1A1-205ENST00000476387 DCAF13Q9NV06 445 aaKnown RBP14.06□□□□□ -0.16
COL1A1-205ENST00000476387 FFAR1O14842 300 aa14.05□□□□□ -0.16
COL1A1-205ENST00000476387 FAM107AO95990 144 aa14.05□□□□□ -0.16
COL1A1-205ENST00000476387 HLA-HP01893 362 aa14.05□□□□□ -0.16
COL1A1-205ENST00000476387 HSD17B1P14061 328 aa14.05□□□□□ -0.16
COL1A1-205ENST00000476387 SWI5Q1ZZU3 235 aa14.05□□□□□ -0.16
COL1A1-205ENST00000476387 GSG1Q2KHT4 349 aa14.05□□□□□ -0.16
COL1A1-205ENST00000476387 ALG10Q5BKT4 473 aa14.05□□□□□ -0.16
COL1A1-205ENST00000476387 ZNF627Q7L945 461 aa14.05□□□□□ -0.16
COL1A1-205ENST00000476387 HIPK1Q86Z02 1210 aa14.05□□□□□ -0.16
COL1A1-205ENST00000476387 RNF113BQ8IZP6 322 aaKnown RBP14.05□□□□□ -0.16
COL1A1-205ENST00000476387 ZNF525Q8N782 197 aa14.05□□□□□ -0.16
COL1A1-205ENST00000476387 OR4F15Q8NGB8 312 aa14.05□□□□□ -0.16
COL1A1-205ENST00000476387 MOSPD2Q8NHP6 518 aa14.05□□□□□ -0.16
COL1A1-205ENST00000476387 ASB10Q8WXI3 467 aa14.05□□□□□ -0.16
COL1A1-205ENST00000476387 FAM168AQ92567 244 aa14.05□□□□□ -0.16
COL1A1-205ENST00000476387 TNFRSF13CQ96RJ3 184 aa14.05□□□□□ -0.16
COL1A1-205ENST00000476387 CDRT15Q96T59 188 aa14.05□□□□□ -0.16
COL1A1-205ENST00000476387 ANKRD19PQ9H560 264 aa14.05□□□□□ -0.16
COL1A1-205ENST00000476387 HIF3AQ9Y2N7 669 aa14.05□□□□□ -0.16
COL1A1-205ENST00000476387 V9GYQ6 96 aa14.05□□□□□ -0.16
COL1A1-205ENST00000476387 MXRA5Q9NR99 2828 aa14.05□□□□□ -0.16
COL1A1-205ENST00000476387 FBN1P35555 2871 aaKnown RBP14.05□□□□□ -0.16
COL1A1-205ENST00000476387 STAB1Q9NY15 2570 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 ZNF503-AS2A6NEH8 195 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 NPIPB13A6NJU9 1138 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 EFCAB9A8MZ26 197 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 CENPBD1B2RD01 187 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 NPIPB4C9JG80 1138 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 DHHO43323 396 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 PDE5AO76074 875 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 PRSS23O95084 383 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 UBL3O95164 117 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 FARS2O95363 451 aaKnown RBP14.04□□□□□ -0.16
COL1A1-205ENST00000476387 RAB36O95755 333 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 F12P00748 615 aaPredicted RBP14.04□□□□□ -0.16
COL1A1-205ENST00000476387 H1F0P07305 194 aaKnown RBP14.04□□□□□ -0.16
COL1A1-205ENST00000476387 CELA3BP08861 270 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 QDPRP09417 244 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 TSPAN19P0C672 248 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 NR2C1P13056 603 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 ACADSP16219 412 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 ZNF84P51523 738 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 VLDLRP98155 873 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 PRKCDQ05655 676 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 TOP3AQ13472 1001 aaPredicted RBP14.04□□□□□ -0.16
COL1A1-205ENST00000476387 KRT72Q14CN4 511 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 MST1LQ2TV78 715 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 TMEM249Q2WGJ8 235 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 FGD3Q5JSP0 725 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 MBOAT2Q6ZWT7 520 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 PIWIL3Q7Z3Z3 882 aaKnown RBP14.04□□□□□ -0.16
COL1A1-205ENST00000476387 OAFQ86UD1 273 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 DEFB107AQ8IZN7 70 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 SYT14Q8NB59 555 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 CCDC197Q8NCU1 140 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 IL17RDQ8NFM7 739 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 C10orf105Q8TEF2 133 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 HTRA1Q92743 480 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 NSMCE2Q96MF7 247 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 ZNF347Q96SE7 839 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 NDEL1Q9GZM8 345 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 GORASP2Q9H8Y8 452 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 SEC61A2Q9H9S3 476 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 NMNAT1Q9HAN9 279 aaPredicted RBP14.04□□□□□ -0.16
COL1A1-205ENST00000476387 TMEM5Q9Y2B1 443 aa14.04□□□□□ -0.16
COL1A1-205ENST00000476387 RTTNQ86VV8 2226 aa14.03□□□□□ -0.16
COL1A1-205ENST00000476387 ANK3Q12955 4377 aaKnown RBP14.03□□□□□ -0.16
COL1A1-205ENST00000476387 TRAV27A0A087WT01 109 aa14.03□□□□□ -0.16
COL1A1-205ENST00000476387 A0A087WUU8 490 aa14.03□□□□□ -0.16
COL1A1-205ENST00000476387 A8MV72 311 aaPredicted RBP14.03□□□□□ -0.16
COL1A1-205ENST00000476387 hCG_2039718K7EN88 272 aa14.03□□□□□ -0.16
COL1A1-205ENST00000476387 ARPC2O15144 300 aa14.03□□□□□ -0.16
COL1A1-205ENST00000476387 TRMUO75648 421 aaKnown RBP14.03□□□□□ -0.16
COL1A1-205ENST00000476387 OR8G3PP0DMU2 310 aa14.03□□□□□ -0.16
COL1A1-205ENST00000476387 RHCEP18577 417 aa14.03□□□□□ -0.16
COL1A1-205ENST00000476387 MAKP20794 623 aa14.03□□□□□ -0.16
COL1A1-205ENST00000476387 FUT4P22083 530 aa14.03□□□□□ -0.16
COL1A1-205ENST00000476387 CALCRP30988 508 aa14.03□□□□□ -0.16
COL1A1-205ENST00000476387 GPR4P46093 362 aa14.03□□□□□ -0.16
COL1A1-205ENST00000476387 PTDSS1P48651 473 aaKnown RBP14.03□□□□□ -0.16
COL1A1-205ENST00000476387 SLC9A3P48764 834 aa14.03□□□□□ -0.16
COL1A1-205ENST00000476387 SNRPD2P62316 118 aaKnown RBP14.03□□□□□ -0.16
COL1A1-205ENST00000476387 LSM11P83369 360 aaKnown RBP eCLIP14.03□□□□□ -0.16
COL1A1-205ENST00000476387 PIGFQ07326 219 aa14.03□□□□□ -0.16
COL1A1-205ENST00000476387 CD47Q08722 323 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms