RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 CA10Q9NS85 328 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 DZANK1Q9NVP4 752 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 DAPP1Q9UN19 280 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 SCML1Q9UN30 329 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 NPIPA1Q9UND3 350 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 PLCL2Q9UPR0 1127 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 LIPT1Q9Y234 373 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 HEATR5AQ86XA9 2040 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 IGHV3-15A0A0B4J1V0 119 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 A0A1W2PQF6 199 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 IRGMA1A4Y4 181 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 OR6C68A6NDL8 312 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 PYCARD-AS1I3L0S3 204 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 TO15178 435 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 SOX15O60248 233 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 RBMXL2O75526 392 aaKnown RBP4.55□□□□□ -1.68
CCDC39-204ENST00000476379 SCGNO76038 276 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 IGF2P01344 180 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 PMP2P02689 132 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 S100A6P06703 90 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 CISD3P0C7P0 127 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 GABRR1P24046 479 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 DDOSTP39656 456 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 NPY4RP50391 375 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 PCBP3P57721 371 aaKnown RBP4.55□□□□□ -1.68
CCDC39-204ENST00000476379 RPS15P62841 145 aaKnown RBP4.55□□□□□ -1.68
CCDC39-204ENST00000476379 PITPNAQ00169 270 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF169Q14929 603 aaPredicted RBP4.55□□□□□ -1.68
CCDC39-204ENST00000476379 C14orf28Q4W4Y0 310 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 PDZD11Q5EBL8 140 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 C3orf38Q5JPI3 329 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 SPIN3Q5JUX0 258 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 AGBL4Q5VU57 503 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 IKBIPQ70UQ0 350 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 LRRC28Q86X40 367 aaPredicted RBP4.55□□□□□ -1.68
CCDC39-204ENST00000476379 FAM26EQ8N5C1 309 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 GVQW1Q8N7I0 195 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF283Q8N7M2 679 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 ZNRF4Q8WWF5 429 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 BTBD2Q9BX70 525 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 CHST6Q9GZX3 395 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 PIGUQ9H490 435 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 ESRP2Q9H6T0 727 aaKnown RBP4.55□□□□□ -1.68
CCDC39-204ENST00000476379 MRPL22Q9NWU5 206 aaKnown RBP4.55□□□□□ -1.68
CCDC39-204ENST00000476379 SLC35A3Q9Y2D2 325 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 LSM5Q9Y4Y9 91 aaKnown RBP4.55□□□□□ -1.68
CCDC39-204ENST00000476379 TEX13DA0A0J9YY54 714 aaPredicted RBP4.55□□□□□ -1.68
CCDC39-204ENST00000476379 C2orf74A8MZ97 194 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 TMEM229AB2RXF0 380 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 DCTN6O00399 190 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 SLC19A2O60779 497 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF254O75437 659 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 ATG12O94817 140 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 SEMA4FO95754 770 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 GPR75O95800 540 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 OLFM2O95897 454 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 TNFP01375 233 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF20P17024 532 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 HTR1FP30939 366 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 CDAP32320 146 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 FAUP35544 74 aaKnown RBP4.55□□□□□ -1.68
CCDC39-204ENST00000476379 ADPRHP54922 357 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 TNFRSF17Q02223 184 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 TEKQ02763 1124 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 CLINT1Q14677 625 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 STK11Q15831 433 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 CLEC12BQ2HXU8 276 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 MYO7BQ6PIF6 2116 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 MSANTD1Q6ZTZ1 278 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 VN1R4Q7Z5H5 301 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 ABHD12BQ7Z5M8 362 aaPredicted RBP4.55□□□□□ -1.68
CCDC39-204ENST00000476379 MCATQ8IVS2 390 aaKnown RBP4.55□□□□□ -1.68
CCDC39-204ENST00000476379 TMEM151BQ8IW70 566 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 ETFBKMTQ8IXQ9 262 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF454Q8N9F8 522 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 OR6N1Q8NGY5 312 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 SLC39A7Q92504 469 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 PELI1Q96FA3 418 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 KLHDC7BQ96G42 594 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.55□□□□□ -1.68
CCDC39-204ENST00000476379 WWTR1Q9GZV5 400 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 EMC7Q9NPA0 242 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 A4GALTQ9NPC4 353 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 NCDNQ9UBB6 729 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 COPS7AQ9UBW8 275 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 DOCK4Q8N1I0 1966 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 IGLV3-16A0A075B6K0 115 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 H3BMH7 237 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 SPINT1O43278 529 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 CHP2O43745 196 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 TXNDC12O95881 172 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 H2BFMP0C1H6 154 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 PSMB1P20618 241 aaKnown RBP4.54□□□□□ -1.68
CCDC39-204ENST00000476379 SERPINA2P20848 420 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 MAP2K6P52564 334 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 EFNB2P52799 333 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 BCL2A1Q16548 175 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 AWAT2Q6E213 333 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 FBXO42Q6P3S6 717 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 HAGHLQ6PII5 290 aaPredicted RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms