RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 DUX4L7P0CJ90 424 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 NPR2P20594 1047 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 VDAC1P21796 283 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 PTGDSP41222 190 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 TNFSF9P41273 254 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 OR1D4P47884 311 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 ALDH3B2P48448 385 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 CSRP3P50461 194 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 PLK1P53350 603 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 ATP6V0D1P61421 351 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 TRMT5Q32P41 509 aaKnown RBP3.38□□□□□ -1.87
VPS13D-207ENST00000476169 MARCH8Q5T0T0 291 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 ADAMTSL4-AS1Q5T5F5 129 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 GPRC6AQ5T6X5 926 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 ADNP2Q6IQ32 1131 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 EMBQ6PCB8 327 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 DUX4L9Q6RFH8 374 aaPredicted RBP3.38□□□□□ -1.87
VPS13D-207ENST00000476169 REG3GQ6UW15 175 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 ZNF621Q6ZSS3 439 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 NELFCDQ8IXH7 590 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 SPAG16Q8N0X2 631 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 SVOPLQ8N434 492 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 OR5K2Q8NHB8 316 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 FAM76AQ8TAV0 307 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 SSC4DQ8WTU2 575 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 PAGE5Q96GU1 130 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 ITCHQ96J02 903 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 POM121L2Q96KW2 1035 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 NAT9Q9BTE0 207 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 HES7Q9BYE0 225 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 UPF3BQ9BZI7 483 aaKnown RBP3.38□□□□□ -1.87
VPS13D-207ENST00000476169 OCR1Q9BZK8 76 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 NAA50Q9GZZ1 169 aaKnown RBP3.38□□□□□ -1.87
VPS13D-207ENST00000476169 OR52A5Q9H2C5 316 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 RNF167Q9H6Y7 350 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 PRSS16Q9NQE7 514 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 MCUBQ9NWR8 336 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 B3GNT2Q9NY97 397 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 SPRR3Q9UBC9 169 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 DUX4Q9UBX2 424 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 PYGO1Q9Y3Y4 419 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 CFAP43Q8NDM7 1665 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 ABCA6Q8N139 1617 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 NCOA1Q15788 1441 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 A0A1B0GWB2 263 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 IFITM10A6NMD0 228 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 ZNF487B1APH4 448 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 PRSS44E7EML9 344 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 H7C0C1 242 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 SLC9A3R1O14745 358 aaPredicted RBP3.37□□□□□ -1.87
VPS13D-207ENST00000476169 XRCC2O43543 280 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 LCA5LO95447 670 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 AMBPP02760 352 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 FGF1P05230 155 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 HCKP08631 526 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 IGFBP5P24593 272 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 HTR2CP28335 458 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 SSR4P51571 173 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 HNRNPA3P51991 378 aaKnown RBP3.37□□□□□ -1.87
VPS13D-207ENST00000476169 ATP12AP54707 1039 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 ADARB1P78563 741 aaKnown RBP3.37□□□□□ -1.87
VPS13D-207ENST00000476169 CCDC173Q0VFZ6 552 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 PMS2P3Q13401 168 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 MAPRE2Q15555 327 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 CCL14Q16627 93 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 NSUN5P1Q3KNT7 163 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 PARP15Q460N3 678 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 RUSC1-AS1Q66K80 236 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 ACOT7LQ6ZUV0 252 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 SLC35D2Q76EJ3 337 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 ARCQ7LC44 396 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 ZNF571Q7Z3V5 609 aaPredicted RBP3.37□□□□□ -1.87
VPS13D-207ENST00000476169 CYP4Z1Q86W10 505 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 SLC22A18ASQ8N1D0 253 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 ACOT11Q8WXI4 607 aaPredicted RBP3.37□□□□□ -1.87
VPS13D-207ENST00000476169 TAF15Q92804 592 aaKnown RBP eCLIP3.37□□□□□ -1.87
VPS13D-207ENST00000476169 FBXO17Q96EF6 278 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 FOXN4Q96NZ1 517 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 SH3GL1Q99961 368 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 PELOQ9BRX2 385 aaKnown RBP3.37□□□□□ -1.87
VPS13D-207ENST00000476169 MED10Q9BTT4 135 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 ELOVL4Q9GZR5 314 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 UPF3AQ9H1J1 476 aaKnown RBP3.37□□□□□ -1.87
VPS13D-207ENST00000476169 OPN3Q9H1Y3 402 aaPredicted RBP3.37□□□□□ -1.87
VPS13D-207ENST00000476169 PARLQ9H300 379 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 NTN4Q9HB63 628 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 FOLH1BQ9HBA9 442 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 ACP6Q9NPH0 428 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 MS4A12Q9NXJ0 267 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 WWOXQ9NZC7 414 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 MTRF1LQ9UGC7 380 aaKnown RBP3.37□□□□□ -1.87
VPS13D-207ENST00000476169 DCDC2Q9UHG0 476 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 KIF25Q9UIL4 384 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 ZNF580Q9UK33 172 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 SPATA2Q9UM82 520 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 ING4Q9UNL4 249 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 POFUT2Q9Y2G5 429 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 GOLT1BQ9Y3E0 138 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 CDH10Q9Y6N8 788 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 V9GYY9 64 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms