RNA–Protein interactions for RNA: ENST00000476061.5

PTPN7-208, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-208ENST00000476061 SOX7Q9BT81 388 aa8.53□□□□□ -1.04
PTPN7-208ENST00000476061 POLR2J2Q9GZM3 115 aaKnown RBP8.53□□□□□ -1.04
PTPN7-208ENST00000476061 POLR2J3Q9H1A7 115 aaKnown RBP8.53□□□□□ -1.04
PTPN7-208ENST00000476061 C1orf198Q9H425 327 aa8.53□□□□□ -1.04
PTPN7-208ENST00000476061 REV1Q9UBZ9 1251 aa8.53□□□□□ -1.04
PTPN7-208ENST00000476061 ARL2BPQ9Y2Y0 163 aa8.53□□□□□ -1.04
PTPN7-208ENST00000476061 LRP5LA4QPB2 252 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 CPSF4LA6NMK7 179 aaKnown RBP8.52□□□□□ -1.05
PTPN7-208ENST00000476061 C11orf98E9PRG8 122 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 DHHO43323 396 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 FARS2O95363 451 aaKnown RBP8.52□□□□□ -1.05
PTPN7-208ENST00000476061 SNAP29O95721 258 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 FAM107AO95990 144 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 CH25HO95992 272 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 NPPAP01160 153 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 PTHP01270 115 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 OPN1SWP03999 348 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 PGA4P0DJD7 388 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 PGA3P0DJD8 388 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 PCMT1P22061 227 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 ACHEP22303 614 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 APEX1P27695 318 aaKnown RBP8.52□□□□□ -1.05
PTPN7-208ENST00000476061 RBM34P42696 430 aaKnown RBP8.52□□□□□ -1.05
PTPN7-208ENST00000476061 ZNF133P52736 654 aaPredicted RBP8.52□□□□□ -1.05
PTPN7-208ENST00000476061 DVL1P1P54792 670 aaPredicted RBP8.52□□□□□ -1.05
PTPN7-208ENST00000476061 CDH15P55291 814 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 NFYCQ13952 458 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 SELPLGQ14242 412 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 HIST3H3Q16695 136 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 MSMPQ1L6U9 139 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 VMACQ2NL98 169 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 CR1LQ2VPA4 569 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 MMEL1Q495T6 779 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 ELFN2Q5R3F8 820 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 GKAP1Q5VSY0 366 aaPredicted RBP8.52□□□□□ -1.05
PTPN7-208ENST00000476061 LIPNQ5VXI9 398 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 LRFN4Q6PJG9 635 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 ZNF584Q8IVC4 421 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 RFLNBQ8N5W9 214 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 OR4D11Q8NGI4 311 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 LIPHQ8WWY8 451 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 RDH5Q92781 318 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 TAMM41Q96BW9 452 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 SEPHS2Q99611 448 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 PRSS27Q9BQR3 290 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 MYLK2Q9H1R3 596 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 TMEM38BQ9NVV0 291 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 ARMCX1Q9P291 453 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 TMEFF2Q9UIK5 374 aaPredicted RBP8.52□□□□□ -1.05
PTPN7-208ENST00000476061 ZNF346Q9UL40 294 aaKnown RBP8.52□□□□□ -1.05
PTPN7-208ENST00000476061 SLC7A7Q9UM01 511 aa8.52□□□□□ -1.05
PTPN7-208ENST00000476061 IGLV3-9A0A075B6K5 115 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 LOC100653049A0A140TA62 436 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 HTR3EA5X5Y0 456 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 NPIPB13A6NJU9 1138 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 BBIP1A8MTZ0 92 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 B4DSR2 109 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 NPIPB4C9JG80 1138 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 FBP2O00757 339 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 RNF13O43567 381 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 SERPINI2O75830 405 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 KRT34O76011 436 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 BCL10O95999 233 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 IGHG1P01857 330 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 MT-ND1P03886 318 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 HIST1H2ABP04908 130 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 TSPAN19P0C672 248 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 THRBP10828 461 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 CRYBA2P53672 197 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 TMEM33P57088 247 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 CYLC2Q14093 348 aaPredicted RBP8.51□□□□□ -1.05
PTPN7-208ENST00000476061 RAB39AQ14964 217 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 SLC36A2Q495M3 483 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 COQ5Q5HYK3 327 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 NANOGP8Q6NSW7 305 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 HIST3H2AQ7L7L0 130 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 HDDC2Q7Z4H3 204 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 TSPYL5Q86VY4 417 aaPredicted RBP8.51□□□□□ -1.05
PTPN7-208ENST00000476061 RBM45Q8IUH3 476 aaKnown RBP8.51□□□□□ -1.05
PTPN7-208ENST00000476061 LRRC17Q8N6Y2 441 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 OR8J3Q8NGG0 315 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 OR1J2Q8NGS2 313 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 OR10A6Q8NH74 314 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 VANGL1Q8TAA9 524 aaPredicted RBP8.51□□□□□ -1.05
PTPN7-208ENST00000476061 HIST1H2ACQ93077 130 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 SNX18Q96RF0 628 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 MRPL13Q9BYD1 178 aaKnown RBP8.51□□□□□ -1.05
PTPN7-208ENST00000476061 RACGAP1Q9H0H5 632 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 TPK1Q9H3S4 243 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 NANOGQ9H9S0 305 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 MEPEQ9NQ76 525 aaPredicted RBP8.51□□□□□ -1.05
PTPN7-208ENST00000476061 STX18Q9P2W9 335 aaKnown RBP8.51□□□□□ -1.05
PTPN7-208ENST00000476061 GPR160Q9UJ42 338 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 BAG5Q9UL15 447 aa8.51□□□□□ -1.05
PTPN7-208ENST00000476061 MRASO14807 208 aa8.5□□□□□ -1.05
PTPN7-208ENST00000476061 DCTN3O75935 186 aa8.5□□□□□ -1.05
PTPN7-208ENST00000476061 IFNA14P01570 189 aa8.5□□□□□ -1.05
PTPN7-208ENST00000476061 TFP02787 698 aa8.5□□□□□ -1.05
PTPN7-208ENST00000476061 HPXP02790 462 aa8.5□□□□□ -1.05
PTPN7-208ENST00000476061 QDPRP09417 244 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms