RNA–Protein interactions for RNA: ENST00000475195.5

ATG4B-216, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-216ENST00000475195 SMPD2O60906 423 aa14.33□□□□□ -0.12
ATG4B-216ENST00000475195 UBOX5O94941 541 aa14.33□□□□□ -0.12
ATG4B-216ENST00000475195 GADD45GO95257 159 aa14.33□□□□□ -0.12
ATG4B-216ENST00000475195 CTXN1P60606 82 aa14.33□□□□□ -0.12
ATG4B-216ENST00000475195 RPL27P61353 136 aaKnown RBP14.33□□□□□ -0.12
ATG4B-216ENST00000475195 TUBA1BP68363 451 aa14.33□□□□□ -0.12
ATG4B-216ENST00000475195 TUBA4AP68366 448 aa14.33□□□□□ -0.12
ATG4B-216ENST00000475195 NKX6-1P78426 367 aaPredicted RBP14.33□□□□□ -0.12
ATG4B-216ENST00000475195 TRAP1Q12931 704 aaKnown RBP14.33□□□□□ -0.12
ATG4B-216ENST00000475195 C10orf128Q5T292 105 aa14.33□□□□□ -0.12
ATG4B-216ENST00000475195 SHEQ5VZ18 495 aa14.33□□□□□ -0.12
ATG4B-216ENST00000475195 PGM2L1Q6PCE3 622 aa14.33□□□□□ -0.12
ATG4B-216ENST00000475195 CYP2R1Q6VVX0 501 aa14.33□□□□□ -0.12
ATG4B-216ENST00000475195 TUBA1AQ71U36 451 aa14.33□□□□□ -0.12
ATG4B-216ENST00000475195 DHFR2Q86XF0 187 aa14.33□□□□□ -0.12
ATG4B-216ENST00000475195 MEX3DQ86XN8 651 aaKnown RBP14.33□□□□□ -0.12
ATG4B-216ENST00000475195 TGIF2LYQ8IUE0 185 aa14.33□□□□□ -0.12
ATG4B-216ENST00000475195 ZDHHC21Q8IVQ6 265 aa14.33□□□□□ -0.12
ATG4B-216ENST00000475195 OR4K5Q8NGD3 323 aa14.33□□□□□ -0.12
ATG4B-216ENST00000475195 TMEM171Q8WVE6 324 aa14.33□□□□□ -0.12
ATG4B-216ENST00000475195 HDAC2Q92769 488 aaKnown RBP14.33□□□□□ -0.12
ATG4B-216ENST00000475195 DHRS9Q9BPW9 319 aa14.33□□□□□ -0.12
ATG4B-216ENST00000475195 TRAF4Q9BUZ4 470 aaPredicted RBP14.33□□□□□ -0.12
ATG4B-216ENST00000475195 MAGIXQ9H6Y5 334 aa14.33□□□□□ -0.12
ATG4B-216ENST00000475195 LAMP3Q9UQV4 416 aa14.33□□□□□ -0.12
ATG4B-216ENST00000475195 V9GYQ6 96 aa14.33□□□□□ -0.12
ATG4B-216ENST00000475195 MCIDASD6RGH6 385 aa14.32□□□□□ -0.12
ATG4B-216ENST00000475195 KRT36O76013 467 aa14.32□□□□□ -0.12
ATG4B-216ENST00000475195 CECR9P0C854 216 aa14.32□□□□□ -0.12
ATG4B-216ENST00000475195 TTKP33981 857 aa14.32□□□□□ -0.12
ATG4B-216ENST00000475195 GPR4P46093 362 aa14.32□□□□□ -0.12
ATG4B-216ENST00000475195 CDH11P55287 796 aa14.32□□□□□ -0.12
ATG4B-216ENST00000475195 CLRN1P58418 232 aa14.32□□□□□ -0.12
ATG4B-216ENST00000475195 NAAAQ02083 359 aa14.32□□□□□ -0.12
ATG4B-216ENST00000475195 FGD3Q5JSP0 725 aa14.32□□□□□ -0.12
ATG4B-216ENST00000475195 ZNF544Q6NX49 715 aa14.32□□□□□ -0.12
ATG4B-216ENST00000475195 B3GLCTQ6Y288 498 aa14.32□□□□□ -0.12
ATG4B-216ENST00000475195 ZER1Q7Z7L7 766 aa14.32□□□□□ -0.12
ATG4B-216ENST00000475195 SKA3Q8IX90 412 aa14.32□□□□□ -0.12
ATG4B-216ENST00000475195 SLC22A24Q8N4F4 322 aa14.32□□□□□ -0.12
ATG4B-216ENST00000475195 ARIH2OSQ8N7S6 290 aa14.32□□□□□ -0.12
ATG4B-216ENST00000475195 NOXO1Q8NFA2 376 aa14.32□□□□□ -0.12
ATG4B-216ENST00000475195 IL17RDQ8NFM7 739 aa14.32□□□□□ -0.12
ATG4B-216ENST00000475195 OR13C2Q8NGS9 318 aa14.32□□□□□ -0.12
ATG4B-216ENST00000475195 OR52J3Q8NH60 311 aa14.32□□□□□ -0.12
ATG4B-216ENST00000475195 ZNF519Q8TB69 540 aa14.32□□□□□ -0.12
ATG4B-216ENST00000475195 FNDC8Q8TC99 324 aa14.32□□□□□ -0.12
ATG4B-216ENST00000475195 FAM46AQ96IP4 442 aaKnown RBP14.32□□□□□ -0.12
ATG4B-216ENST00000475195 GPA33Q99795 319 aa14.32□□□□□ -0.12
ATG4B-216ENST00000475195 TMUB1Q9BVT8 246 aa14.32□□□□□ -0.12
ATG4B-216ENST00000475195 CXorf56Q9H5V9 222 aa14.32□□□□□ -0.12
ATG4B-216ENST00000475195 FAIMQ9NVQ4 179 aa14.32□□□□□ -0.12
ATG4B-216ENST00000475195 TMEM38BQ9NVV0 291 aa14.32□□□□□ -0.12
ATG4B-216ENST00000475195 MOKQ9UQ07 419 aa14.32□□□□□ -0.12
ATG4B-216ENST00000475195 ENTPD5O75356 428 aa14.31□□□□□ -0.12
ATG4B-216ENST00000475195 SEC14L2O76054 403 aa14.31□□□□□ -0.12
ATG4B-216ENST00000475195 PDE5AO76074 875 aa14.31□□□□□ -0.12
ATG4B-216ENST00000475195 CD14P08571 375 aa14.31□□□□□ -0.12
ATG4B-216ENST00000475195 OR8G3PP0DMU2 310 aa14.31□□□□□ -0.12
ATG4B-216ENST00000475195 B4GALT1P15291 398 aa14.31□□□□□ -0.12
ATG4B-216ENST00000475195 ZNF14P17017 642 aaPredicted RBP14.31□□□□□ -0.12
ATG4B-216ENST00000475195 PTH2RP49190 550 aa14.31□□□□□ -0.12
ATG4B-216ENST00000475195 BNIP1Q12981 228 aa14.31□□□□□ -0.12
ATG4B-216ENST00000475195 THEM4Q5T1C6 240 aa14.31□□□□□ -0.12
ATG4B-216ENST00000475195 FAM205BPQ63HN1 556 aa14.31□□□□□ -0.12
ATG4B-216ENST00000475195 C1orf94Q6P1W5 598 aa14.31□□□□□ -0.12
ATG4B-216ENST00000475195 SLC25A47Q6Q0C1 308 aa14.31□□□□□ -0.12
ATG4B-216ENST00000475195 FAM122BQ7Z309 247 aa14.31□□□□□ -0.12
ATG4B-216ENST00000475195 MDP1Q86V88 176 aa14.31□□□□□ -0.12
ATG4B-216ENST00000475195 SYT14Q8NB59 555 aa14.31□□□□□ -0.12
ATG4B-216ENST00000475195 CLPTM1LQ96KA5 538 aa14.31□□□□□ -0.12
ATG4B-216ENST00000475195 TSPAN32Q96QS1 320 aa14.31□□□□□ -0.12
ATG4B-216ENST00000475195 GPX7Q96SL4 187 aaPredicted RBP14.31□□□□□ -0.12
ATG4B-216ENST00000475195 BTBD10Q9BSF8 475 aa14.31□□□□□ -0.12
ATG4B-216ENST00000475195 THTPAQ9BU02 230 aa14.31□□□□□ -0.12
ATG4B-216ENST00000475195 ALG12Q9BV10 488 aa14.31□□□□□ -0.12
ATG4B-216ENST00000475195 TRIM15Q9C019 465 aa14.31□□□□□ -0.12
ATG4B-216ENST00000475195 NRIP3Q9NQ35 241 aa14.31□□□□□ -0.12
ATG4B-216ENST00000475195 USF3Q68DE3 2245 aa14.3□□□□□ -0.12
ATG4B-216ENST00000475195 A6NIZ1 184 aa14.3□□□□□ -0.12
ATG4B-216ENST00000475195 ARHGEF9O43307 516 aa14.3□□□□□ -0.12
ATG4B-216ENST00000475195 AHCYL1O43865 530 aa14.3□□□□□ -0.12
ATG4B-216ENST00000475195 NDUFB2O95178 105 aa14.3□□□□□ -0.12
ATG4B-216ENST00000475195 HLA-HP01893 362 aa14.3□□□□□ -0.12
ATG4B-216ENST00000475195 CRYAAP02489 173 aa14.3□□□□□ -0.12
ATG4B-216ENST00000475195 NR2C1P13056 603 aa14.3□□□□□ -0.12
ATG4B-216ENST00000475195 RRM2P31350 389 aa14.3□□□□□ -0.12
ATG4B-216ENST00000475195 APOBEC3AP31941 199 aaPredicted RBP14.3□□□□□ -0.12
ATG4B-216ENST00000475195 ACVR1BP36896 505 aa14.3□□□□□ -0.12
ATG4B-216ENST00000475195 FXYD6P3P58550 94 aa14.3□□□□□ -0.12
ATG4B-216ENST00000475195 RAP1BP61224 184 aa14.3□□□□□ -0.12
ATG4B-216ENST00000475195 RAB1AP62820 205 aa14.3□□□□□ -0.12
ATG4B-216ENST00000475195 RAP1AP62834 184 aa14.3□□□□□ -0.12
ATG4B-216ENST00000475195 SPIBQ01892 262 aa14.3□□□□□ -0.12
ATG4B-216ENST00000475195 GSG1Q2KHT4 349 aa14.3□□□□□ -0.12
ATG4B-216ENST00000475195 DNAL1Q4LDG9 190 aa14.3□□□□□ -0.12
ATG4B-216ENST00000475195 AGAP6Q5VW22 663 aa14.3□□□□□ -0.12
ATG4B-216ENST00000475195 C11orf71Q6IPW1 123 aa14.3□□□□□ -0.12
ATG4B-216ENST00000475195 DPPA2Q7Z7J5 298 aa14.3□□□□□ -0.12
ATG4B-216ENST00000475195 MYPOPQ86VE0 399 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms