RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 PRR23D2P0DMB1 279 aaPredicted RBP8.43□□□□□ -1.06
DDX39B-217ENST00000474961 SELENOPP49908 381 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 LCN6P62502 163 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 CD47Q08722 323 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 CDK5R2Q13319 367 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 MED21Q13503 144 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 CAMK2DQ13557 499 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 MAD2L1BPQ15013 274 aaPredicted RBP8.43□□□□□ -1.06
DDX39B-217ENST00000474961 TMEM201Q5SNT2 666 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 CARD17Q5XLA6 110 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 NIPAL3Q6P499 406 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 B3GNT6Q6ZMB0 384 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 SEM1Q6ZVN7 128 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 CXXC5Q7LFL8 322 aaKnown RBP8.43□□□□□ -1.06
DDX39B-217ENST00000474961 NUFIP2Q7Z417 695 aaKnown RBP8.43□□□□□ -1.06
DDX39B-217ENST00000474961 HDDC2Q7Z4H3 204 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 ADCK1Q86TW2 530 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 CPOQ8IVL8 374 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 RPRMLQ8N4K4 120 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 MARVELD2Q8N4S9 558 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 FAM26EQ8N5C1 309 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 SYT14Q8NB59 555 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 MBD3L2Q8NHZ7 208 aaPredicted RBP8.43□□□□□ -1.06
DDX39B-217ENST00000474961 TMEM45BQ96B21 275 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 OTULINQ96BN8 352 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 SLC25A44Q96H78 314 aaPredicted RBP8.43□□□□□ -1.06
DDX39B-217ENST00000474961 GMPPAQ96IJ6 420 aaPredicted RBP8.43□□□□□ -1.06
DDX39B-217ENST00000474961 OR2M2Q96R28 347 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 SNX18Q96RF0 628 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 NMNAT3Q96T66 252 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 TM9SF2Q99805 663 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 MRPL13Q9BYD1 178 aaKnown RBP8.43□□□□□ -1.06
DDX39B-217ENST00000474961 FN3KQ9H479 309 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 MED20Q9H944 212 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 GP6Q9HCN6 339 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 DNAJC27Q9NZQ0 273 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 TINAGQ9UJW2 476 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 RALYQ9UKM9 306 aaKnown RBP8.43□□□□□ -1.06
DDX39B-217ENST00000474961 RCE1Q9Y256 329 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 NOSIPQ9Y314 301 aaKnown RBP8.43□□□□□ -1.06
DDX39B-217ENST00000474961 PCDHGB5Q9Y5G0 923 aa8.43□□□□□ -1.06
DDX39B-217ENST00000474961 ESPL1Q14674 2120 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 RP1L1Q8IWN7 2480 aaPredicted RBP8.42□□□□□ -1.06
DDX39B-217ENST00000474961 SLC22A23A1A5C7 686 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 EIF4E1BA6NMX2 242 aaKnown RBP8.42□□□□□ -1.06
DDX39B-217ENST00000474961 AHCYL1O43865 530 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 SS18L1O75177 396 aaPredicted RBP8.42□□□□□ -1.06
DDX39B-217ENST00000474961 SLC43A1O75387 559 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 MRPL33O75394 65 aaKnown RBP8.42□□□□□ -1.06
DDX39B-217ENST00000474961 TOXO94900 526 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 IGHG1P01857 330 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 PRB1P04280 392 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 PGA4P0DJD7 388 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 PGA3P0DJD8 388 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 GLI4P10075 376 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 PAICSP22234 425 aaKnown RBP8.42□□□□□ -1.06
DDX39B-217ENST00000474961 COL8A1P27658 744 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 AGTR1P30556 359 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 TIMP3P35625 211 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 CSNK1A1P48729 337 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 SLC25A1P53007 311 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 CLRN1P58418 232 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 DBPQ10586 325 aaPredicted RBP8.42□□□□□ -1.06
DDX39B-217ENST00000474961 GUSBP1Q15486 140 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 SLC25A30Q5SVS4 291 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 OR2A2Q6IF42 318 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 KRT80Q6KB66 452 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 PLBD1Q6P4A8 553 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.42□□□□□ -1.06
DDX39B-217ENST00000474961 BCDIN3DQ7Z5W3 292 aaKnown RBP8.42□□□□□ -1.06
DDX39B-217ENST00000474961 WFDC8Q8IUA0 241 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 C20orf196Q8IYI0 205 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 GCNT2Q8N0V5 402 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 TMEM123Q8N131 208 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 BBS1Q8NFJ9 593 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 OR9Q1Q8NGQ5 310 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 CNIH3Q8TBE1 160 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 FBLIM1Q8WUP2 373 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 APH1BQ8WW43 257 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 PTP4A1Q93096 173 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 TMEM54Q969K7 222 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 ZNF566Q969W8 418 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 INTS12Q96CB8 462 aaKnown RBP8.42□□□□□ -1.06
DDX39B-217ENST00000474961 LRR1Q96L50 414 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 TTYH2Q9BSA4 534 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 ALG12Q9BV10 488 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 HCAR1Q9BXC0 346 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 NMNAT2Q9BZQ4 307 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 PARPBPQ9NWS1 579 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 CLN6Q9NWW5 311 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 UBAP1Q9NZ09 502 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 VSX1Q9NZR4 365 aaPredicted RBP8.42□□□□□ -1.06
DDX39B-217ENST00000474961 SH3BGRL2Q9UJC5 107 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 POLEQ07864 2286 aa8.42□□□□□ -1.06
DDX39B-217ENST00000474961 FASNP49327 2511 aaKnown RBP8.42□□□□□ -1.06
DDX39B-217ENST00000474961 TRGV8A0A0C4DH27 118 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 CENPBD1B2RD01 187 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 DCTN6O00399 190 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 ENTPD6O75354 484 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 WBP4O75554 376 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms