RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 SELENOVP59797 346 aa11.96□□□□□ -0.49
CCDC78-209ENST00000474647 MRPS11P82912 194 aaKnown RBP11.96□□□□□ -0.49
CCDC78-209ENST00000474647 RBBP4Q09028 425 aa11.96□□□□□ -0.49
CCDC78-209ENST00000474647 FADDQ13158 208 aa11.96□□□□□ -0.49
CCDC78-209ENST00000474647 AWAT1Q58HT5 328 aa11.96□□□□□ -0.49
CCDC78-209ENST00000474647 FAM91A1Q658Y4 838 aa11.96□□□□□ -0.49
CCDC78-209ENST00000474647 ACSM5Q6NUN0 579 aa11.96□□□□□ -0.49
CCDC78-209ENST00000474647 SLC2A7Q6PXP3 512 aa11.96□□□□□ -0.49
CCDC78-209ENST00000474647 CPLX4Q7Z7G2 160 aa11.96□□□□□ -0.49
CCDC78-209ENST00000474647 ZNF584Q8IVC4 421 aa11.96□□□□□ -0.49
CCDC78-209ENST00000474647 SLC30A7Q8NEW0 376 aa11.96□□□□□ -0.49
CCDC78-209ENST00000474647 OR4M2Q8NGB6 313 aa11.96□□□□□ -0.49
CCDC78-209ENST00000474647 FGFBP3Q8TAT2 258 aa11.96□□□□□ -0.49
CCDC78-209ENST00000474647 C10orf82Q8WW14 230 aa11.96□□□□□ -0.49
CCDC78-209ENST00000474647 SLC41A3Q96GZ6 507 aa11.96□□□□□ -0.49
CCDC78-209ENST00000474647 FAM107BQ9H098 131 aa11.96□□□□□ -0.49
CCDC78-209ENST00000474647 DENND2DQ9H6A0 471 aaPredicted RBP11.96□□□□□ -0.49
CCDC78-209ENST00000474647 CDH20Q9HBT6 801 aa11.96□□□□□ -0.49
CCDC78-209ENST00000474647 SLC52A3Q9NQ40 469 aa11.96□□□□□ -0.49
CCDC78-209ENST00000474647 G6PC2Q9NQR9 355 aa11.96□□□□□ -0.49
CCDC78-209ENST00000474647 ZIM2Q9NZV7 527 aa11.96□□□□□ -0.49
CCDC78-209ENST00000474647 TESQ9UGI8 421 aaKnown RBP11.96□□□□□ -0.49
CCDC78-209ENST00000474647 GPR160Q9UJ42 338 aa11.96□□□□□ -0.49
CCDC78-209ENST00000474647 DOCK11Q5JSL3 2073 aa11.96□□□□□ -0.5
CCDC78-209ENST00000474647 C17orf100A8MU93 164 aa11.95□□□□□ -0.5
CCDC78-209ENST00000474647 PLPP2O43688 288 aa11.95□□□□□ -0.5
CCDC78-209ENST00000474647 SNX3O60493 162 aa11.95□□□□□ -0.5
CCDC78-209ENST00000474647 TPST1O60507 370 aa11.95□□□□□ -0.5
CCDC78-209ENST00000474647 FAM107AO95990 144 aa11.95□□□□□ -0.5
CCDC78-209ENST00000474647 BCL10O95999 233 aa11.95□□□□□ -0.5
CCDC78-209ENST00000474647 SERPINA5P05154 406 aa11.95□□□□□ -0.5
CCDC78-209ENST00000474647 ADORA3P0DMS8 318 aa11.95□□□□□ -0.5
CCDC78-209ENST00000474647 ETS2P15036 469 aa11.95□□□□□ -0.5
CCDC78-209ENST00000474647 RAD52P43351 418 aa11.95□□□□□ -0.5
CCDC78-209ENST00000474647 ARFIP2P53365 341 aa11.95□□□□□ -0.5
CCDC78-209ENST00000474647 ERVS71-1P61550 626 aa11.95□□□□□ -0.5
CCDC78-209ENST00000474647 GLO1Q04760 184 aa11.95□□□□□ -0.5
CCDC78-209ENST00000474647 OR1Q1Q15612 314 aa11.95□□□□□ -0.5
CCDC78-209ENST00000474647 GCNT6Q5T4J0 391 aa11.95□□□□□ -0.5
CCDC78-209ENST00000474647 DCAF12L2Q5VW00 463 aa11.95□□□□□ -0.5
CCDC78-209ENST00000474647 C1QL2Q7Z5L3 287 aa11.95□□□□□ -0.5
CCDC78-209ENST00000474647 KRT73Q86Y46 540 aa11.95□□□□□ -0.5
CCDC78-209ENST00000474647 PAQR4Q8N4S7 273 aaPredicted RBP11.95□□□□□ -0.5
CCDC78-209ENST00000474647 SYNPRQ8TBG9 265 aa11.95□□□□□ -0.5
CCDC78-209ENST00000474647 C22orf15Q8WYQ4 148 aa11.95□□□□□ -0.5
CCDC78-209ENST00000474647 SH3GL3Q99963 347 aa11.95□□□□□ -0.5
CCDC78-209ENST00000474647 ELAC2Q9BQ52 826 aaKnown RBP11.95□□□□□ -0.5
CCDC78-209ENST00000474647 SPATA5L1Q9BVQ7 753 aa11.95□□□□□ -0.5
CCDC78-209ENST00000474647 RSPO3Q9BXY4 272 aaPredicted RBP11.95□□□□□ -0.5
CCDC78-209ENST00000474647 TMPRSS13Q9BYE2 586 aa11.95□□□□□ -0.5
CCDC78-209ENST00000474647 PAIP1Q9H074 479 aaKnown RBP11.95□□□□□ -0.5
CCDC78-209ENST00000474647 RNF121Q9H920 327 aa11.95□□□□□ -0.5
CCDC78-209ENST00000474647 TMEM27Q9HBJ8 222 aa11.95□□□□□ -0.5
CCDC78-209ENST00000474647 HINT3Q9NQE9 182 aaKnown RBP11.95□□□□□ -0.5
CCDC78-209ENST00000474647 DECR2Q9NUI1 292 aa11.95□□□□□ -0.5
CCDC78-209ENST00000474647 MRPL39Q9NYK5 338 aaKnown RBP11.95□□□□□ -0.5
CCDC78-209ENST00000474647 SLC13A4Q9UKG4 626 aa11.95□□□□□ -0.5
CCDC78-209ENST00000474647 A0A0B4J2E0 115 aa11.94□□□□□ -0.5
CCDC78-209ENST00000474647 IGHV1-69-2A0A0G2JMI3 117 aa11.94□□□□□ -0.5
CCDC78-209ENST00000474647 A0A1B0GX12 115 aa11.94□□□□□ -0.5
CCDC78-209ENST00000474647 SLC22A23A1A5C7 686 aa11.94□□□□□ -0.5
CCDC78-209ENST00000474647 CLDN25C9JDP6 229 aa11.94□□□□□ -0.5
CCDC78-209ENST00000474647 PLPP3O14495 311 aa11.94□□□□□ -0.5
CCDC78-209ENST00000474647 UBDO15205 165 aa11.94□□□□□ -0.5
CCDC78-209ENST00000474647 OR6A2O95222 327 aa11.94□□□□□ -0.5
CCDC78-209ENST00000474647 ARAFP10398 606 aa11.94□□□□□ -0.5
CCDC78-209ENST00000474647 BMP2P12643 396 aa11.94□□□□□ -0.5
CCDC78-209ENST00000474647 AQP1P29972 269 aa11.94□□□□□ -0.5
CCDC78-209ENST00000474647 MELKQ14680 651 aa11.94□□□□□ -0.5
CCDC78-209ENST00000474647 TSTQ16762 297 aaKnown RBP11.94□□□□□ -0.5
CCDC78-209ENST00000474647 PCGF3Q3KNV8 242 aa11.94□□□□□ -0.5
CCDC78-209ENST00000474647 DHRS4L2Q6PKH6 230 aa11.94□□□□□ -0.5
CCDC78-209ENST00000474647 PIWIL3Q7Z3Z3 882 aaKnown RBP11.94□□□□□ -0.5
CCDC78-209ENST00000474647 PXKQ7Z7A4 578 aa11.94□□□□□ -0.5
CCDC78-209ENST00000474647 SLC22A24Q8N4F4 322 aa11.94□□□□□ -0.5
CCDC78-209ENST00000474647 OR6S1Q8NH40 331 aa11.94□□□□□ -0.5
CCDC78-209ENST00000474647 NANPQ8TBE9 248 aa11.94□□□□□ -0.5
CCDC78-209ENST00000474647 GTF3AQ92664 365 aaKnown RBP11.94□□□□□ -0.5
CCDC78-209ENST00000474647 GTF2H4Q92759 462 aa11.94□□□□□ -0.5
CCDC78-209ENST00000474647 CCT8L2Q96SF2 557 aa11.94□□□□□ -0.5
CCDC78-209ENST00000474647 RABEP2Q9H5N1 569 aa11.94□□□□□ -0.5
CCDC78-209ENST00000474647 ESM1Q9NQ30 184 aa11.94□□□□□ -0.5
CCDC78-209ENST00000474647 SDR39U1Q9NRG7 319 aaPredicted RBP11.94□□□□□ -0.5
CCDC78-209ENST00000474647 GLTPQ9NZD2 209 aa11.94□□□□□ -0.5
CCDC78-209ENST00000474647 PPIAL4AQ9Y536 164 aa11.94□□□□□ -0.5
CCDC78-209ENST00000474647 PCDHGB1Q9Y5G3 927 aa11.94□□□□□ -0.5
CCDC78-209ENST00000474647 FARS2O95363 451 aaKnown RBP11.93□□□□□ -0.5
CCDC78-209ENST00000474647 IGHV2-5P01817 119 aa11.93□□□□□ -0.5
CCDC78-209ENST00000474647 OR8G3PP0DMU2 310 aa11.93□□□□□ -0.5
CCDC78-209ENST00000474647 CDH12P55289 794 aa11.93□□□□□ -0.5
CCDC78-209ENST00000474647 CDK6Q00534 326 aa11.93□□□□□ -0.5
CCDC78-209ENST00000474647 TEKQ02763 1124 aa11.93□□□□□ -0.5
CCDC78-209ENST00000474647 SF3A3Q12874 501 aaKnown RBP eCLIP11.93□□□□□ -0.5
CCDC78-209ENST00000474647 TBC1D28Q2M2D7 210 aa11.93□□□□□ -0.5
CCDC78-209ENST00000474647 REEP3Q6NUK4 255 aa11.93□□□□□ -0.5
CCDC78-209ENST00000474647 TMEM53Q6P2H8 277 aa11.93□□□□□ -0.5
CCDC78-209ENST00000474647 WDR88Q6ZMY6 472 aa11.93□□□□□ -0.5
CCDC78-209ENST00000474647 USP51Q70EK9 711 aa11.93□□□□□ -0.5
CCDC78-209ENST00000474647 SLC35D2Q76EJ3 337 aa11.93□□□□□ -0.5
CCDC78-209ENST00000474647 PIGWQ7Z7B1 504 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms