RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 FNDC4Q9H6D8 234 aaPredicted RBP1.92□□□□□ -2.1
CALD1-216ENST00000473714 ADGRL4Q9HBW9 690 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 FGF22Q9HCT0 170 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 C6orf50Q9HD87 102 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 IL1RAPQ9NPH3 570 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 POLE4Q9NR33 117 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 NANSQ9NR45 359 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 ABCC13Q9NSE7 274 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 ETNK2Q9NVF9 386 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 UTP6Q9NYH9 597 aaKnown RBP1.92□□□□□ -2.1
CALD1-216ENST00000473714 MRPL39Q9NYK5 338 aaKnown RBP1.92□□□□□ -2.1
CALD1-216ENST00000473714 AIPL1Q9NZN9 384 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 THYN1Q9P016 225 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 GNG12Q9UBI6 72 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 PURGQ9UJV8 347 aaKnown RBP1.92□□□□□ -2.1
CALD1-216ENST00000473714 CDH9Q9ULB4 789 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 EIF3LQ9Y262 564 aaKnown RBP1.92□□□□□ -2.1
CALD1-216ENST00000473714 EXOGQ9Y2C4 368 aaKnown RBP1.92□□□□□ -2.1
CALD1-216ENST00000473714 MUC2Q02817 5179 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 FREM3P0C091 2139 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 KIAA1549Q9HCM3 1950 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 A0A0A6YYD4 124 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 TRAV17A0A0B4J275 112 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 A0A1B0GUV1 79 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 FAM240BA0A1B0GVZ2 78 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 FAM92AA1XBS5 289 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 OR6C65A6NJZ3 312 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 PP2D1A8MPX8 630 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 ZNF724A8MTY0 619 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 A8MXK9 166 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 E9PBE3 544 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 K7EQD1 137 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 FCN1O00602 326 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 UBFD1O14562 309 aaKnown RBP1.91□□□□□ -2.1
CALD1-216ENST00000473714 IMPA2O14732 288 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 SCAMP2O15127 329 aaKnown RBP1.91□□□□□ -2.1
CALD1-216ENST00000473714 ZSCAN12O43309 604 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 SNNO75324 88 aaPredicted RBP1.91□□□□□ -2.1
CALD1-216ENST00000473714 ALOX12BO75342 701 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 ERLIN1O75477 346 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 KHDRBS3O75525 346 aaKnown RBP1.91□□□□□ -2.1
CALD1-216ENST00000473714 ZNF821O75541 412 aaPredicted RBP1.91□□□□□ -2.1
CALD1-216ENST00000473714 SLITRK3O94933 977 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 DUS4LO95620 317 aaKnown RBP1.91□□□□□ -2.1
CALD1-216ENST00000473714 POP4O95707 220 aaKnown RBP1.91□□□□□ -2.1
CALD1-216ENST00000473714 CGAP01215 116 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 TNFP01375 233 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 IGLV1-44P01699 117 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 FGF1P05230 155 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 CTSLP07711 333 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 SP1P08047 785 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 HBQ1P09105 142 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 CCDC166P0CW27 439 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 TROVE2P10155 538 aaKnown RBP eCLIP1.91□□□□□ -2.1
CALD1-216ENST00000473714 PNMTP11086 282 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 RNH1P13489 461 aaKnown RBP1.91□□□□□ -2.1
CALD1-216ENST00000473714 ABOP16442 354 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 GNB3P16520 340 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 MFAP2P55001 183 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 UBE2HP62256 183 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 RPS21P63220 83 aaKnown RBP1.91□□□□□ -2.1
CALD1-216ENST00000473714 VLDLRP98155 873 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 PLOD1Q02809 727 aaPredicted RBP1.91□□□□□ -2.1
CALD1-216ENST00000473714 ATXN7L3Q14CW9 347 aaPredicted RBP1.91□□□□□ -2.1
CALD1-216ENST00000473714 FASTKD3Q14CZ7 662 aaKnown RBP1.91□□□□□ -2.1
CALD1-216ENST00000473714 NECTIN1Q15223 517 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 PPP1R7Q15435 360 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 SYPL1Q16563 259 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 TMEM249Q2WGJ8 235 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 CYBRD1Q53TN4 286 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 ACER2Q5QJU3 275 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 PHYHD1Q5SRE7 291 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 FAM120AOSQ5T036 256 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 TAF3Q5VWG9 929 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 MEDAGQ5VYS4 303 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 CYB5R2Q6BCY4 276 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 RHBDD2Q6NTF9 364 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 ARHGAP11AQ6P4F7 1023 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 ATRAIDQ6UW56 229 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 LRRTM1Q86UE6 522 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 VSTM4Q8IW00 320 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 TMEM123Q8N131 208 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 BBS5Q8N3I7 341 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 RPRMLQ8N4K4 120 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 NFAM1Q8NET5 270 aaPredicted RBP1.91□□□□□ -2.1
CALD1-216ENST00000473714 OR5AU1Q8NGC0 362 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 OR52K2Q8NGK3 314 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 OR1B1Q8NGR6 318 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 IL1F10Q8WWZ1 152 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 OR8D1Q8WZ84 308 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 OSTF1Q92882 214 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 RPL3LQ92901 407 aaKnown RBP1.91□□□□□ -2.1
CALD1-216ENST00000473714 DNAJA3Q96EY1 480 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 PDXPQ96GD0 296 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 SH3YL1Q96HL8 342 aaPredicted RBP1.91□□□□□ -2.1
CALD1-216ENST00000473714 CELF6Q96J87 481 aaKnown RBP1.91□□□□□ -2.1
CALD1-216ENST00000473714 C7orf34Q96L11 122 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 NSMCE3Q96MG7 304 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 TSNARE1Q96NA8 513 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 COL21A1Q96P44 957 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms