RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 URB1O60287 2271 aaKnown RBP5.57□□□□□ -1.52
HERC4-209ENST00000473533 A0A1B0GVT2 93 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 TMEM72A0PK05 275 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 HIDE1A8MVS5 230 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 ZNF736B4DX44 427 aaPredicted RBP5.57□□□□□ -1.52
HERC4-209ENST00000473533 NPIPB9F8W1W9 429 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 H0YGG7 62 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 OR6A2O95222 327 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 SNAPINO95295 136 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 MAS1P04201 325 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 TPT1P13693 172 aaKnown RBP5.57□□□□□ -1.52
HERC4-209ENST00000473533 IGFALSP35858 605 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 SOX2P48431 317 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 PRKXP51817 358 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 HCCSP53701 268 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 H2BFSP57053 126 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 ARF3P61204 181 aaPredicted RBP5.57□□□□□ -1.52
HERC4-209ENST00000473533 HTRA3P83110 453 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 NAAAQ02083 359 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 MGAT2Q10469 447 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 SNTB1Q13884 538 aaKnown RBP5.57□□□□□ -1.52
HERC4-209ENST00000473533 NFATC4Q14934 902 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 EXOSC7Q15024 291 aaKnown RBP5.57□□□□□ -1.52
HERC4-209ENST00000473533 PRAMEF17Q5VTA0 474 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 PSRC1Q6PGN9 363 aaPredicted RBP5.57□□□□□ -1.52
HERC4-209ENST00000473533 C5orf46Q6UWT4 87 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 DGLUCYQ7Z3D6 616 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 ADGRE4PQ86SQ3 457 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 ZNF584Q8IVC4 421 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 LINC00518Q8N0U6 118 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 AVL9Q8NBF6 648 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 CLEC1AQ8NC01 280 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 OR51L1Q8NGJ5 315 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 OR6N2Q8NGY6 317 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 BAHD1Q8TBE0 780 aaPredicted RBP5.57□□□□□ -1.52
HERC4-209ENST00000473533 FBXW5Q969U6 566 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 MCHR2Q969V1 340 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 C4orf45Q96LM5 186 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 DGAT2Q96PD7 388 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 TWSG1Q9GZX9 223 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 EPHA6Q9UF33 1036 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 MRM2Q9UI43 246 aaKnown RBP5.57□□□□□ -1.52
HERC4-209ENST00000473533 NOP16Q9Y3C1 178 aaKnown RBP5.57□□□□□ -1.52
HERC4-209ENST00000473533 A0A1W2PP55 124 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 OR5H14A6NHG9 310 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 OR2AT4A6NND4 320 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 ABHD16AO95870 558 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 CBX7O95931 251 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 AMY2AP04746 511 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 PET100P0DJ07 73 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 HOXB3P14651 431 aaPredicted RBP5.56□□□□□ -1.52
HERC4-209ENST00000473533 DLSTP36957 453 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 TNFRSF4P43489 277 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 GSK3AP49840 483 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 EMDP50402 254 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 CLDN12P56749 244 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 NANOS3P60323 173 aaKnown RBP5.56□□□□□ -1.52
HERC4-209ENST00000473533 RUNX3Q13761 415 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 ZNF74Q16587 644 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 ACTBL2Q562R1 376 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 SFRP5Q5T4F7 317 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 HAGHLQ6PII5 290 aaPredicted RBP5.56□□□□□ -1.52
HERC4-209ENST00000473533 DNM1P34Q6PK57 102 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 NHLRC1Q6VVB1 395 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 RFLNBQ8N5W9 214 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 RCBTB1Q8NDN9 531 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 OR14C36Q8NHC7 312 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 RGP1Q92546 391 aaPredicted RBP5.56□□□□□ -1.52
HERC4-209ENST00000473533 ZBTB8AQ96BR9 441 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 C3orf49Q96BT1 292 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 NARS2Q96I59 477 aaKnown RBP5.56□□□□□ -1.52
HERC4-209ENST00000473533 ASB16Q96NS5 453 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 NUDT16L1Q9BRJ7 211 aaKnown RBP5.56□□□□□ -1.52
HERC4-209ENST00000473533 ZNF471Q9BX82 626 aaPredicted RBP5.56□□□□□ -1.52
HERC4-209ENST00000473533 B3GNT4Q9C0J1 378 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 POFUT1Q9H488 388 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 TMEM185BQ9H7F4 350 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 UBQLN4Q9NRR5 601 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 FRRS1LQ9P0K9 344 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 CXXC1Q9P0U4 656 aaPredicted RBP5.56□□□□□ -1.52
HERC4-209ENST00000473533 FBXL2Q9UKC9 423 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 TNFSF18Q9UNG2 199 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 KLF2Q9Y5W3 355 aaPredicted RBP5.56□□□□□ -1.52
HERC4-209ENST00000473533 TCF20Q9UGU0 1960 aaKnown RBP5.56□□□□□ -1.52
HERC4-209ENST00000473533 TBC1D3DA0A087WVF3 549 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 A0A1B0GTI1 187 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 TBC1D3LB9A6J9 549 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 SCDO00767 359 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 MT-ATP6P00846 226 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 CD74P04233 296 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 GP1BAP07359 652 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 TBC1D3HP0C7X1 549 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 ALOX5APP20292 161 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 HTR2CP28335 458 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 ACTR1BP42025 376 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 RIDAP52758 137 aaKnown RBP5.56□□□□□ -1.52
HERC4-209ENST00000473533 ACTR1AP61163 376 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 GPR18Q14330 331 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 GAB4Q2WGN9 574 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 RNASE10Q5GAN6 216 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms