RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 C12orf10Q9HB07 376 aa10.67□□□□□ -0.7
TRAF4-209ENST00000473421 A4GALTQ9NPC4 353 aa10.67□□□□□ -0.7
TRAF4-209ENST00000473421 B3GAT2Q9NPZ5 323 aa10.67□□□□□ -0.7
TRAF4-209ENST00000473421 MRPL39Q9NYK5 338 aaKnown RBP10.67□□□□□ -0.7
TRAF4-209ENST00000473421 TAS2R5Q9NYW4 299 aa10.67□□□□□ -0.7
TRAF4-209ENST00000473421 SLC25A37Q9NYZ2 338 aa10.67□□□□□ -0.7
TRAF4-209ENST00000473421 GLTPQ9NZD2 209 aa10.67□□□□□ -0.7
TRAF4-209ENST00000473421 SLAMF8Q9P0V8 285 aa10.67□□□□□ -0.7
TRAF4-209ENST00000473421 A0A0B4J2E0 115 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 MDFIC2A0A1B0GVS7 189 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 A0A1B0GX12 115 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 BIRC5O15392 142 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 TPD52L2O43399 206 aaKnown RBP10.66□□□□□ -0.7
TRAF4-209ENST00000473421 SLC22A3O75751 556 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 ANP32DO95626 131 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 THY1P04216 161 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 BMP2P12643 396 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 FPR2P25090 351 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 WNT5AP41221 380 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 MMP15P51511 669 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 SLC9A3R2Q15599 337 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 OR1Q1Q15612 314 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 PCGF3Q3KNV8 242 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 ULK3Q6PHR2 472 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 SLC2A7Q6PXP3 512 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 PIWIL3Q7Z3Z3 882 aaKnown RBP10.66□□□□□ -0.7
TRAF4-209ENST00000473421 C10orf53Q8N6V4 93 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 SCAIQ8N9R8 606 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 NFKBIDQ8NI38 313 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 ZNF519Q8TB69 540 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 DNAJA4Q8WW22 397 aaPredicted RBP10.66□□□□□ -0.7
TRAF4-209ENST00000473421 GEMIN6Q8WXD5 167 aaKnown RBP10.66□□□□□ -0.7
TRAF4-209ENST00000473421 GTF2H4Q92759 462 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 SLC35B4Q969S0 331 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 ASPNQ9BXN1 380 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 DENND2DQ9H6A0 471 aaPredicted RBP10.66□□□□□ -0.7
TRAF4-209ENST00000473421 SAP30LQ9HAJ7 183 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 NTN4Q9HB63 628 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 CDH20Q9HBT6 801 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 TCF7L2Q9NQB0 619 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 DECR2Q9NUI1 292 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 PDP1Q9P0J1 537 aaPredicted RBP10.66□□□□□ -0.7
TRAF4-209ENST00000473421 TANC2Q9HCD6 1990 aa10.66□□□□□ -0.7
TRAF4-209ENST00000473421 A0A0G2JK05 382 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 ISPDA4D126 451 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 CLIC1O00299 241 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 DHHO43323 396 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 LYPD3O95274 346 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 IGHV3-13P01766 116 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 IL6P05231 212 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 MMP7P09237 267 aaPredicted RBP10.65□□□□□ -0.7
TRAF4-209ENST00000473421 ADORA3P0DMS8 318 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 KITP10721 976 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 PRKAR1BP31321 381 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 ZNF81P51508 661 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 VSNL1P62760 191 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 IFFO1Q0D2I5 559 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 BAMBIQ13145 260 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 STX3Q13277 289 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 HFEQ30201 348 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 PDCD4Q53EL6 469 aaKnown RBP10.65□□□□□ -0.7
TRAF4-209ENST00000473421 C6orf10Q5SRN2 563 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 THEM4Q5T1C6 240 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 DHRS4L2Q6PKH6 230 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 SLC35D2Q76EJ3 337 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 TEX29Q8N6K0 151 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 OR1J1Q8NGS3 322 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 OR6S1Q8NH40 331 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 BBS10Q8TAM1 723 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 IPCEF1Q8WWN9 437 aaPredicted RBP10.65□□□□□ -0.7
TRAF4-209ENST00000473421 C11orf40Q8WZ69 217 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 RAB1CQ92928 201 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 SLC47A1Q96FL8 570 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 ZNF347Q96SE7 839 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 ZBTB18Q99592 522 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 ROPN1BQ9BZX4 212 aaPredicted RBP10.65□□□□□ -0.7
TRAF4-209ENST00000473421 IKZF5Q9H5V7 419 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 ARMC7Q9H6L4 198 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 RNF121Q9H920 327 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 ROPN1Q9HAT0 212 aaPredicted RBP10.65□□□□□ -0.7
TRAF4-209ENST00000473421 SLCO1C1Q9NYB5 712 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 PURGQ9UJV8 347 aaKnown RBP10.65□□□□□ -0.7
TRAF4-209ENST00000473421 NUP50Q9UKX7 468 aa10.65□□□□□ -0.7
TRAF4-209ENST00000473421 LOC100509620A0A075B734 347 aa10.64□□□□□ -0.71
TRAF4-209ENST00000473421 TM9SF1O15321 606 aa10.64□□□□□ -0.71
TRAF4-209ENST00000473421 MFN2O95140 757 aa10.64□□□□□ -0.71
TRAF4-209ENST00000473421 SNAP29O95721 258 aa10.64□□□□□ -0.71
TRAF4-209ENST00000473421 RNASE1P07998 156 aaKnown RBP10.64□□□□□ -0.71
TRAF4-209ENST00000473421 QDPRP09417 244 aa10.64□□□□□ -0.71
TRAF4-209ENST00000473421 SBK2P0C263 348 aa10.64□□□□□ -0.71
TRAF4-209ENST00000473421 PGA4P0DJD7 388 aa10.64□□□□□ -0.71
TRAF4-209ENST00000473421 PGA3P0DJD8 388 aa10.64□□□□□ -0.71
TRAF4-209ENST00000473421 IGHV4-38-2P0DP08 117 aa10.64□□□□□ -0.71
TRAF4-209ENST00000473421 ETS2P15036 469 aa10.64□□□□□ -0.71
TRAF4-209ENST00000473421 AQP1P29972 269 aa10.64□□□□□ -0.71
TRAF4-209ENST00000473421 CDAP32320 146 aa10.64□□□□□ -0.71
TRAF4-209ENST00000473421 KRTAP10-3P60369 221 aa10.64□□□□□ -0.71
TRAF4-209ENST00000473421 LRRC74AQ0VAA2 488 aa10.64□□□□□ -0.71
TRAF4-209ENST00000473421 ZNF154Q13106 437 aa10.64□□□□□ -0.71
TRAF4-209ENST00000473421 C5orf46Q6UWT4 87 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms