RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 DUSP3P51452 185 aaPredicted RBP1.47□□□□□ -2.17
RBM39-228ENST00000471635 NCBP2P52298 156 aaKnown RBP eCLIP1.47□□□□□ -2.17
RBM39-228ENST00000471635 CDC20Q12834 499 aa1.47□□□□□ -2.17
RBM39-228ENST00000471635 ERCC8Q13216 396 aa1.47□□□□□ -2.17
RBM39-228ENST00000471635 OR5I1Q13606 314 aa1.47□□□□□ -2.17
RBM39-228ENST00000471635 HES5Q5TA89 166 aa1.47□□□□□ -2.17
RBM39-228ENST00000471635 LINC00173Q6ZV60 143 aa1.47□□□□□ -2.17
RBM39-228ENST00000471635 BHLHA15Q7RTS1 189 aaPredicted RBP1.47□□□□□ -2.17
RBM39-228ENST00000471635 ECHDC2Q86YB7 292 aa1.47□□□□□ -2.17
RBM39-228ENST00000471635 ACOT4Q8N9L9 421 aa1.47□□□□□ -2.17
RBM39-228ENST00000471635 GATSQ8NAP1 163 aa1.47□□□□□ -2.17
RBM39-228ENST00000471635 NECAP1Q8NC96 275 aa1.47□□□□□ -2.17
RBM39-228ENST00000471635 RLN3Q8WXF3 142 aa1.47□□□□□ -2.17
RBM39-228ENST00000471635 SYAP1Q96A49 352 aaPredicted RBP1.47□□□□□ -2.17
RBM39-228ENST00000471635 CLCC1Q96S66 551 aa1.47□□□□□ -2.17
RBM39-228ENST00000471635 SULT4A1Q9BR01 284 aa1.47□□□□□ -2.17
RBM39-228ENST00000471635 ERP44Q9BS26 406 aa1.47□□□□□ -2.17
RBM39-228ENST00000471635 GPATCH2LQ9NWQ4 482 aa1.47□□□□□ -2.17
RBM39-228ENST00000471635 GIN1Q9NXP7 522 aa1.47□□□□□ -2.17
RBM39-228ENST00000471635 CGNQ9P2M7 1197 aaKnown RBP1.47□□□□□ -2.17
RBM39-228ENST00000471635 PTBP2Q9UKA9 531 aaKnown RBP1.47□□□□□ -2.17
RBM39-228ENST00000471635 MMP17Q9ULZ9 603 aa1.47□□□□□ -2.17
RBM39-228ENST00000471635 TNS2Q63HR2 1409 aa1.47□□□□□ -2.17
RBM39-228ENST00000471635 FANCIQ9NVI1 1328 aa1.46□□□□□ -2.18
RBM39-228ENST00000471635 OR5B21A6NL26 309 aa1.46□□□□□ -2.18
RBM39-228ENST00000471635 C16orf90A8MZG2 172 aa1.46□□□□□ -2.18
RBM39-228ENST00000471635 POLR2DO15514 142 aaKnown RBP1.46□□□□□ -2.18
RBM39-228ENST00000471635 MED7O43513 233 aa1.46□□□□□ -2.18
RBM39-228ENST00000471635 NOL3O60936 208 aaKnown RBP1.46□□□□□ -2.18
RBM39-228ENST00000471635 HSMCR30P0CW71 290 aa1.46□□□□□ -2.18
RBM39-228ENST00000471635 SMIM10L1P0DMW3 83 aa1.46□□□□□ -2.18
RBM39-228ENST00000471635 RDXP35241 583 aaKnown RBP1.46□□□□□ -2.18
RBM39-228ENST00000471635 CX3CR1P49238 355 aa1.46□□□□□ -2.18
RBM39-228ENST00000471635 ZADH2Q8N4Q0 377 aa1.46□□□□□ -2.18
RBM39-228ENST00000471635 FNDC5Q8NAU1 212 aa1.46□□□□□ -2.18
RBM39-228ENST00000471635 VN1R2Q8NFZ6 395 aa1.46□□□□□ -2.18
RBM39-228ENST00000471635 FAM110BQ8TC76 370 aa1.46□□□□□ -2.18
RBM39-228ENST00000471635 MAGEE2Q8TD90 523 aaPredicted RBP1.46□□□□□ -2.18
RBM39-228ENST00000471635 CXorf40BQ96DE9 158 aa1.46□□□□□ -2.18
RBM39-228ENST00000471635 TBC1D31Q96DN5 1066 aa1.46□□□□□ -2.18
RBM39-228ENST00000471635 COQ2Q96H96 371 aa1.46□□□□□ -2.18
RBM39-228ENST00000471635 SMIM10Q96HG1 83 aa1.46□□□□□ -2.18
RBM39-228ENST00000471635 TSGA13Q96PP4 275 aa1.46□□□□□ -2.18
RBM39-228ENST00000471635 RNF5Q99942 180 aa1.46□□□□□ -2.18
RBM39-228ENST00000471635 ZSCAN5AQ9BUG6 496 aa1.46□□□□□ -2.18
RBM39-228ENST00000471635 FAIM2Q9BWQ8 316 aa1.46□□□□□ -2.18
RBM39-228ENST00000471635 PARD6BQ9BYG5 372 aa1.46□□□□□ -2.18
RBM39-228ENST00000471635 GBA3Q9H227 469 aa1.46□□□□□ -2.18
RBM39-228ENST00000471635 HMG20AQ9NP66 347 aa1.46□□□□□ -2.18
RBM39-228ENST00000471635 TMCO1Q9UM00 188 aa1.46□□□□□ -2.18
RBM39-228ENST00000471635 SNX6Q9UNH7 406 aa1.46□□□□□ -2.18
RBM39-228ENST00000471635 KCNIP3Q9Y2W7 256 aa1.46□□□□□ -2.18
RBM39-228ENST00000471635 WDR62O43379 1518 aa1.45□□□□□ -2.18
RBM39-228ENST00000471635 IGKV1D-13A0A0B4J2D9 117 aa1.45□□□□□ -2.18
RBM39-228ENST00000471635 VGLL3A8MV65 326 aa1.45□□□□□ -2.18
RBM39-228ENST00000471635 ZNF207O43670 478 aaKnown RBP1.45□□□□□ -2.18
RBM39-228ENST00000471635 SNNO75324 88 aaPredicted RBP1.45□□□□□ -2.18
RBM39-228ENST00000471635 SLC25A14O95258 325 aaPredicted RBP1.45□□□□□ -2.18
RBM39-228ENST00000471635 IGKV1-13P0DP09 117 aa1.45□□□□□ -2.18
RBM39-228ENST00000471635 GRIA1P42261 906 aa1.45□□□□□ -2.18
RBM39-228ENST00000471635 NPBWR2P48146 333 aa1.45□□□□□ -2.18
RBM39-228ENST00000471635 IRX3P78415 501 aaPredicted RBP1.45□□□□□ -2.18
RBM39-228ENST00000471635 CDK16Q00536 496 aa1.45□□□□□ -2.18
RBM39-228ENST00000471635 LOXL1Q08397 574 aaPredicted RBP1.45□□□□□ -2.18
RBM39-228ENST00000471635 KLHL38Q2WGJ6 581 aa1.45□□□□□ -2.18
RBM39-228ENST00000471635 CCDC152Q4G0S7 254 aa1.45□□□□□ -2.18
RBM39-228ENST00000471635 FILIP1LQ4L180 1135 aa1.45□□□□□ -2.18
RBM39-228ENST00000471635 PDZK1Q5T2W1 519 aa1.45□□□□□ -2.18
RBM39-228ENST00000471635 STRADAQ7RTN6 431 aa1.45□□□□□ -2.18
RBM39-228ENST00000471635 DHDDSQ86SQ9 333 aa1.45□□□□□ -2.18
RBM39-228ENST00000471635 MIR7-3HGQ8N6C7 128 aa1.45□□□□□ -2.18
RBM39-228ENST00000471635 GEMIN6Q8WXD5 167 aaKnown RBP1.45□□□□□ -2.18
RBM39-228ENST00000471635 MS4A4EQ96PG1 132 aa1.45□□□□□ -2.18
RBM39-228ENST00000471635 TSSK3Q96PN8 268 aa1.45□□□□□ -2.18
RBM39-228ENST00000471635 TEKT3Q9BXF9 490 aa1.45□□□□□ -2.18
RBM39-228ENST00000471635 GABARAPL3Q9BY60 117 aa1.45□□□□□ -2.18
RBM39-228ENST00000471635 LINC00597Q9H2U6 94 aa1.45□□□□□ -2.18
RBM39-228ENST00000471635 UGT1A7Q9HAW7 530 aa1.45□□□□□ -2.18
RBM39-228ENST00000471635 UGT1A10Q9HAW8 530 aa1.45□□□□□ -2.18
RBM39-228ENST00000471635 UGT1A8Q9HAW9 530 aa1.45□□□□□ -2.18
RBM39-228ENST00000471635 POLE4Q9NR33 117 aa1.45□□□□□ -2.18
RBM39-228ENST00000471635 SH3BGRL2Q9UJC5 107 aa1.45□□□□□ -2.18
RBM39-228ENST00000471635 ATP6V0A2Q9Y487 856 aa1.45□□□□□ -2.18
RBM39-228ENST00000471635 PRRC2BQ5JSZ5 2229 aaKnown RBP1.44□□□□□ -2.18
RBM39-228ENST00000471635 TRAV26-1A0A087WT03 109 aa1.44□□□□□ -2.18
RBM39-228ENST00000471635 MAGEB3O15480 346 aa1.44□□□□□ -2.18
RBM39-228ENST00000471635 SCGNO76038 276 aa1.44□□□□□ -2.18
RBM39-228ENST00000471635 DESP17661 470 aa1.44□□□□□ -2.18
RBM39-228ENST00000471635 NAMPTP43490 491 aa1.44□□□□□ -2.18
RBM39-228ENST00000471635 CCT3P49368 545 aaKnown RBP1.44□□□□□ -2.18
RBM39-228ENST00000471635 ATP1B3P54709 279 aa1.44□□□□□ -2.18
RBM39-228ENST00000471635 ERVK-25P63136 954 aa1.44□□□□□ -2.18
RBM39-228ENST00000471635 FAM78AQ5JUQ0 283 aa1.44□□□□□ -2.18
RBM39-228ENST00000471635 CNIH2Q6PI25 160 aa1.44□□□□□ -2.18
RBM39-228ENST00000471635 PLA2G4DQ86XP0 818 aa1.44□□□□□ -2.18
RBM39-228ENST00000471635 NUDCD3Q8IVD9 361 aa1.44□□□□□ -2.18
RBM39-228ENST00000471635 STPG2Q8N412 459 aa1.44□□□□□ -2.18
RBM39-228ENST00000471635 MREGQ8N565 214 aa1.44□□□□□ -2.18
RBM39-228ENST00000471635 GPATCH11Q8N954 259 aa1.44□□□□□ -2.18
RBM39-228ENST00000471635 STEAP2Q8NFT2 490 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms