RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 CXCL13O43927 109 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 HCN1O60741 890 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 OR7A10O76100 309 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 TOX4O94842 621 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 TNFAIP8O95379 198 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 AHSA1O95433 338 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 PMS2P2O95744 297 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 CLPTM1O96005 669 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 ACTL6AO96019 429 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 CRYABP02511 175 aaKnown RBP4.21□□□□□ -1.74
SF3B1-208ENST00000470268 TSPAN19P0C672 248 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 SAGP10523 405 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-208ENST00000470268 HLA-DOBP13765 273 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 ANXA8P13928 327 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 IGFBP5P24593 272 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 UQCRC1P31930 480 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 IDUAP35475 653 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 AQP2P41181 271 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 SLC6A9P48067 706 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 HSPA13P48723 471 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 H3F3AP84243 136 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 SRYQ05066 204 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 CD47Q08722 323 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 GALEQ14376 348 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 MS4A18Q3C1V0 323 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 TMEM236Q5W0B7 351 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 ZNF620Q6ZNG0 422 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 OVCH2Q7RTZ1 564 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 WDFY1Q8IWB7 410 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 LINC00471Q8N535 108 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 PACRGLQ8N7B6 248 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 TMEM99Q8N816 258 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 LRRC75AQ8NAA5 344 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 TSPAN14Q8NG11 270 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 OR10D3Q8NH80 312 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 MOSPD2Q8NHP6 518 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 MFSD8Q8NHS3 518 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 FAM81AQ8TBF8 368 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 GNPDA2Q8TDQ7 276 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 OSTF1Q92882 214 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 NMD3Q96D46 503 aaKnown RBP4.21□□□□□ -1.74
SF3B1-208ENST00000470268 WBP1Q96G27 269 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 RBM4BQ9BQ04 359 aaKnown RBP4.21□□□□□ -1.74
SF3B1-208ENST00000470268 RBM4Q9BWF3 364 aaKnown RBP4.21□□□□□ -1.74
SF3B1-208ENST00000470268 UCK2Q9BZX2 261 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 LDAHQ9H6V9 325 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 FKRPQ9H9S5 495 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 MSL2Q9HCI7 577 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 NANSQ9NR45 359 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 KRT84Q9NSB2 600 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 PAK1IP1Q9NWT1 392 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-208ENST00000470268 IL20Q9NYY1 176 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 B3GAT1Q9P2W7 334 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 HDGFL3Q9Y3E1 203 aa4.21□□□□□ -1.74
SF3B1-208ENST00000470268 UNC119BA6NIH7 251 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 MCIDASD6RGH6 385 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 BLOC1S5-TXNDC5H3BN57 136 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 SMAD9O15198 467 aaKnown RBP4.2□□□□□ -1.74
SF3B1-208ENST00000470268 OR2T1O43869 369 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 AQP8O94778 261 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 TPPPO94811 219 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 HPRP00739 348 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 MT-ATP6P00846 226 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 HTR1AP08908 422 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 SFTPCP11686 197 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 CPN1P15169 458 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 GYPEP15421 78 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 FKBP2P26885 142 aaKnown RBP4.2□□□□□ -1.74
SF3B1-208ENST00000470268 FMO3P31513 532 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 SLURP1P55000 103 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 OR2B6P58173 313 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 RAC3P60763 192 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 RPL18Q07020 188 aaKnown RBP4.2□□□□□ -1.74
SF3B1-208ENST00000470268 PTGES3Q15185 160 aaKnown RBP4.2□□□□□ -1.74
SF3B1-208ENST00000470268 BCL2A1Q16548 175 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 SGCBQ16585 318 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 CNPY1Q3B7I2 92 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 ZBED5Q49AG3 693 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 CLEC12AQ5QGZ9 265 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 HBMQ6B0K9 141 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 ARHGAP11AQ6P4F7 1023 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 C5orf46Q6UWT4 87 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 NHLRC1Q6VVB1 395 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 RASSF6Q6ZTQ3 369 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 ADGRE4PQ86SQ3 457 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 OAFQ86UD1 273 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 IGFN1Q86VF2 1251 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 CDK20Q8IZL9 346 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 PARP8Q8N3A8 854 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 RPRMLQ8N4K4 120 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 IQCF1Q8N6M8 205 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 C10orf53Q8N6V4 93 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 OR5M9Q8NGP3 310 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 OR4Q3Q8NH05 313 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 OR5J2Q8NH18 312 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 OR6S1Q8NH40 331 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 OR2V1Q8NHB1 315 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 ROBO4Q8WZ75 1007 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 SDCCAG3Q96C92 435 aa4.2□□□□□ -1.74
SF3B1-208ENST00000470268 SAMD8Q96LT4 415 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms