RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 UPB1Q9UBR1 384 aa13.02□□□□□ -0.33
COL9A3-209ENST00000469852 A1L4Q6 167 aa13.01□□□□□ -0.33
COL9A3-209ENST00000469852 LYZL6O75951 148 aa13.01□□□□□ -0.33
COL9A3-209ENST00000469852 SEC14L2O76054 403 aa13.01□□□□□ -0.33
COL9A3-209ENST00000469852 ATP6V1G2O95670 118 aa13.01□□□□□ -0.33
COL9A3-209ENST00000469852 COX5AP20674 150 aa13.01□□□□□ -0.33
COL9A3-209ENST00000469852 CD79BP40259 229 aa13.01□□□□□ -0.33
COL9A3-209ENST00000469852 GIPRP48546 466 aa13.01□□□□□ -0.33
COL9A3-209ENST00000469852 CLRN1P58418 232 aa13.01□□□□□ -0.33
COL9A3-209ENST00000469852 CDK5Q00535 292 aa13.01□□□□□ -0.33
COL9A3-209ENST00000469852 SLC34A1Q06495 639 aa13.01□□□□□ -0.33
COL9A3-209ENST00000469852 CEACAM16Q2WEN9 425 aa13.01□□□□□ -0.33
COL9A3-209ENST00000469852 ZIK1Q3SY52 487 aaPredicted RBP13.01□□□□□ -0.33
COL9A3-209ENST00000469852 OGFRL1Q5TC84 451 aaPredicted RBP13.01□□□□□ -0.33
COL9A3-209ENST00000469852 GPR139Q6DWJ6 353 aa13.01□□□□□ -0.33
COL9A3-209ENST00000469852 C22orf34Q6ZV56 151 aa13.01□□□□□ -0.33
COL9A3-209ENST00000469852 GPR137CQ8N3F9 429 aa13.01□□□□□ -0.33
COL9A3-209ENST00000469852 ZNF433Q8N7K0 673 aaPredicted RBP13.01□□□□□ -0.33
COL9A3-209ENST00000469852 POMGNT2Q8NAT1 580 aa13.01□□□□□ -0.33
COL9A3-209ENST00000469852 SDR9C7Q8NEX9 313 aa13.01□□□□□ -0.33
COL9A3-209ENST00000469852 OR2T33Q8NG76 320 aa13.01□□□□□ -0.33
COL9A3-209ENST00000469852 HTRA1Q92743 480 aa13.01□□□□□ -0.33
COL9A3-209ENST00000469852 RNASE6Q93091 150 aaKnown RBP13.01□□□□□ -0.33
COL9A3-209ENST00000469852 MBOAT4Q96T53 435 aa13.01□□□□□ -0.33
COL9A3-209ENST00000469852 NMNAT3Q96T66 252 aa13.01□□□□□ -0.33
COL9A3-209ENST00000469852 FN3KQ9H479 309 aa13.01□□□□□ -0.33
COL9A3-209ENST00000469852 RIBC2Q9H4K1 309 aa13.01□□□□□ -0.33
COL9A3-209ENST00000469852 CRLF2Q9HC73 371 aa13.01□□□□□ -0.33
COL9A3-209ENST00000469852 ASB6Q9NWX5 421 aa13.01□□□□□ -0.33
COL9A3-209ENST00000469852 ICE1Q9Y2F5 2266 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 SLC22A23A1A5C7 686 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 PRSS37A4D1T9 235 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 A6NIZ1 184 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 RPL36A-HNRNPH2H7BZ11 118 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 M0R129 80 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 DLGAP1O14490 977 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 KRT33AO76009 404 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 CNOT4O95628 575 aaKnown RBP13□□□□□ -0.33
COL9A3-209ENST00000469852 QDPRP09417 244 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 CDH2P19022 906 aaPredicted RBP13□□□□□ -0.33
COL9A3-209ENST00000469852 RAP1BP61224 184 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 ESRRGP62508 458 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 RAP1AP62834 184 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 CD47Q08722 323 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 NPRL3Q12980 569 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 RIPK1Q13546 671 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 PTGES3Q15185 160 aaKnown RBP13□□□□□ -0.33
COL9A3-209ENST00000469852 FAM205BPQ63HN1 556 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 SLC27A4Q6P1M0 643 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 LEG1Q6P5S2 330 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 GALNT4Q8N4A0 578 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 CYB561A3Q8NBI2 242 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 MCHR2Q969V1 340 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 TSSK2Q96PF2 358 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 DDOQ99489 341 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 ALG12Q9BV10 488 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 GABARAPL3Q9BY60 117 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 ULBP2Q9BZM5 246 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 SYT4Q9H2B2 425 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 NELFAQ9H3P2 528 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 SLC25A19Q9HC21 320 aa13□□□□□ -0.33
COL9A3-209ENST00000469852 PRR14LQ5THK1 2151 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 OR6C68A6NDL8 312 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 OR6C65A6NJZ3 312 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 ZAR1LA6NP61 321 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 CENPBD1B2RD01 187 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 ZNF587BE7ETH6 402 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 E9PQ18 207 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 DCTN6O00399 190 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 XKRYO14609 159 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 IDH3BO43837 385 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 RAD51DO75771 328 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 SNAP29O95721 258 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 MPGP29372 298 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 NOS3P29474 1203 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 GRK5P34947 590 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 UGT2B10P36537 528 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 ZNF133P52736 654 aaPredicted RBP12.99□□□□□ -0.33
COL9A3-209ENST00000469852 ARF1P84077 181 aaKnown RBP12.99□□□□□ -0.33
COL9A3-209ENST00000469852 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.99□□□□□ -0.33
COL9A3-209ENST00000469852 ITGADQ13349 1161 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 CRMP1Q14194 572 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 ETFDHQ16134 617 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 SFRP5Q5T4F7 317 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 SLC25A47Q6Q0C1 308 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 HDDC2Q7Z4H3 204 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 ADCK1Q86TW2 530 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 SLC37A3Q8NCC5 494 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 NPEPL1Q8NDH3 523 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 OR52E2Q8NGJ4 325 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 NSMAFQ92636 917 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 TOR3AQ9H497 397 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 ELOVL5Q9NYP7 299 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 TAS2R16Q9NYV7 291 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 VSX1Q9NZR4 365 aaPredicted RBP12.99□□□□□ -0.33
COL9A3-209ENST00000469852 UGT2A1Q9Y4X1 527 aa12.99□□□□□ -0.33
COL9A3-209ENST00000469852 UNC79Q9P2D8 2635 aa12.98□□□□□ -0.33
COL9A3-209ENST00000469852 DHHO43323 396 aa12.98□□□□□ -0.33
COL9A3-209ENST00000469852 CTLA4P16410 223 aa12.98□□□□□ -0.33
COL9A3-209ENST00000469852 PSMB1P20618 241 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms