RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 CXXC5Q7LFL8 322 aaKnown RBP11.28□□□□□ -0.6
USP11-206ENST00000469080 OR4C3Q8NH37 302 aa11.28□□□□□ -0.6
USP11-206ENST00000469080 SMPDL3BQ92485 455 aa11.28□□□□□ -0.6
USP11-206ENST00000469080 RFT1Q96AA3 541 aa11.28□□□□□ -0.6
USP11-206ENST00000469080 MSLNLQ96KJ4 702 aa11.28□□□□□ -0.6
USP11-206ENST00000469080 KCTD7Q96MP8 289 aa11.28□□□□□ -0.6
USP11-206ENST00000469080 PPP1R3EQ9H7J1 279 aa11.28□□□□□ -0.6
USP11-206ENST00000469080 TXNL4BQ9NX01 149 aaKnown RBP11.28□□□□□ -0.6
USP11-206ENST00000469080 MTCH2Q9Y6C9 303 aa11.28□□□□□ -0.6
USP11-206ENST00000469080 A0A1W2PPE3 182 aa11.27□□□□□ -0.61
USP11-206ENST00000469080 TVP23AA6NH52 213 aa11.27□□□□□ -0.61
USP11-206ENST00000469080 RNH1P13489 461 aaKnown RBP11.27□□□□□ -0.61
USP11-206ENST00000469080 BIKQ13323 160 aa11.27□□□□□ -0.61
USP11-206ENST00000469080 C16orf54Q6UWD8 224 aa11.27□□□□□ -0.61
USP11-206ENST00000469080 FAM122BQ7Z309 247 aa11.27□□□□□ -0.61
USP11-206ENST00000469080 SVIPQ8NHG7 77 aa11.27□□□□□ -0.61
USP11-206ENST00000469080 TMEM239Q8WW34 195 aa11.27□□□□□ -0.61
USP11-206ENST00000469080 SPRYD4Q8WW59 207 aaPredicted RBP11.27□□□□□ -0.61
USP11-206ENST00000469080 ACOT11Q8WXI4 607 aaPredicted RBP11.27□□□□□ -0.61
USP11-206ENST00000469080 OPA3Q9H6K4 179 aa11.27□□□□□ -0.61
USP11-206ENST00000469080 SEBOXQ9HB31 216 aaPredicted RBP11.27□□□□□ -0.61
USP11-206ENST00000469080 PDE7BQ9NP56 450 aa11.27□□□□□ -0.61
USP11-206ENST00000469080 CALML5Q9NZT1 146 aa11.27□□□□□ -0.61
USP11-206ENST00000469080 ING1Q9UK53 422 aaPredicted RBP11.27□□□□□ -0.61
USP11-206ENST00000469080 KIAA1671Q9BY89 1806 aa11.27□□□□□ -0.61
USP11-206ENST00000469080 C7orf66A4D0T2 115 aa11.27□□□□□ -0.61
USP11-206ENST00000469080 IGF2P01344 180 aa11.27□□□□□ -0.61
USP11-206ENST00000469080 ANXA7P20073 488 aaKnown RBP11.27□□□□□ -0.61
USP11-206ENST00000469080 BCKDHBP21953 392 aa11.27□□□□□ -0.61
USP11-206ENST00000469080 CRYBB2P43320 205 aa11.27□□□□□ -0.61
USP11-206ENST00000469080 EIF1AXP47813 144 aaKnown RBP11.27□□□□□ -0.61
USP11-206ENST00000469080 DOC2BQ14184 412 aa11.27□□□□□ -0.61
USP11-206ENST00000469080 ZNF658BQ4V348 819 aaPredicted RBP11.27□□□□□ -0.61
USP11-206ENST00000469080 UNQ6494/PRO21346Q6UXR6 183 aa11.27□□□□□ -0.61
USP11-206ENST00000469080 GSG1LQ6UXU4 331 aa11.27□□□□□ -0.61
USP11-206ENST00000469080 FRRS1Q6ZNA5 592 aa11.27□□□□□ -0.61
USP11-206ENST00000469080 FOXRED2Q8IWF2 684 aa11.27□□□□□ -0.61
USP11-206ENST00000469080 C19orf47Q8N9M1 422 aaKnown RBP11.27□□□□□ -0.61
USP11-206ENST00000469080 OR2T33Q8NG76 320 aa11.27□□□□□ -0.61
USP11-206ENST00000469080 OR4C15Q8NGM1 316 aa11.27□□□□□ -0.61
USP11-206ENST00000469080 OR13C5Q8NGS8 318 aa11.27□□□□□ -0.61
USP11-206ENST00000469080 OR51Q1Q8NH59 317 aa11.27□□□□□ -0.61
USP11-206ENST00000469080 BPIFA2Q96DR5 249 aa11.27□□□□□ -0.61
USP11-206ENST00000469080 ZNF582Q96NG8 517 aaPredicted RBP11.27□□□□□ -0.61
USP11-206ENST00000469080 THAP7Q9BT49 309 aaPredicted RBP11.27□□□□□ -0.61
USP11-206ENST00000469080 CHRDQ9H2X0 955 aa11.27□□□□□ -0.61
USP11-206ENST00000469080 AKAP7Q9P0M2 348 aaPredicted RBP11.27□□□□□ -0.61
USP11-206ENST00000469080 IER3IP1Q9Y5U9 82 aa11.27□□□□□ -0.61
USP11-206ENST00000469080 PTPRSQ13332 1948 aa11.27□□□□□ -0.61
USP11-206ENST00000469080 SPTY2D1-AS1A0A0U1RR47 76 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 FAM86C2PA6NEL3 165 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 ZAR1LA6NP61 321 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 C4orf47A7E2U8 309 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 UBE2CO00762 179 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 PRAMEF2O60811 474 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 KRT33AO76009 404 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 ZIC2O95409 532 aaPredicted RBP11.26□□□□□ -0.61
USP11-206ENST00000469080 NME1P15531 152 aaKnown RBP11.26□□□□□ -0.61
USP11-206ENST00000469080 TEAD1P28347 426 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 TDGQ13569 410 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 ELOCQ15369 112 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 CDPF1Q6NVV7 123 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 GABRG3Q99928 467 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 GINS4Q9BRT9 223 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 TOLLIPQ9H0E2 274 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 UBE2ZQ9H832 354 aaPredicted RBP11.26□□□□□ -0.61
USP11-206ENST00000469080 TRPV4Q9HBA0 871 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 Q9N2J8 555 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 HINT3Q9NQE9 182 aaKnown RBP11.26□□□□□ -0.61
USP11-206ENST00000469080 THSD1Q9NS62 852 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 MRPL15Q9P015 296 aaKnown RBP11.26□□□□□ -0.61
USP11-206ENST00000469080 RIIAD1A6NNX1 92 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 RRP8O43159 456 aaKnown RBP11.26□□□□□ -0.61
USP11-206ENST00000469080 F10P00742 488 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 TFPIP10646 304 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 ZNF35P13682 527 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 CRMP1Q14194 572 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 PLA1AQ53H76 456 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 ZNF628Q5EBL2 1059 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 DMRTC1Q5HYR2 192 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 PAPD4Q6PIY7 484 aaKnown RBP11.26□□□□□ -0.61
USP11-206ENST00000469080 TMUB2Q71RG4 321 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 OR52I1Q8NGK6 324 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 BSCL2Q96G97 398 aaPredicted RBP11.26□□□□□ -0.61
USP11-206ENST00000469080 JSRP1Q96MG2 331 aaPredicted RBP11.26□□□□□ -0.61
USP11-206ENST00000469080 PINK1Q9BXM7 581 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 ISG20L2Q9H9L3 353 aaKnown RBP11.26□□□□□ -0.61
USP11-206ENST00000469080 VDAC3Q9Y277 283 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 TNRC18O15417 2968 aaPredicted RBP11.26□□□□□ -0.61
USP11-206ENST00000469080 ELOA3DA6NLF2 546 aaPredicted RBP11.26□□□□□ -0.61
USP11-206ENST00000469080 RAB36O95755 333 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 HPXP02790 462 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 ZNF25P17030 456 aaPredicted RBP11.26□□□□□ -0.61
USP11-206ENST00000469080 ITGA3P26006 1051 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 OC90Q02509 493 aaPredicted RBP11.26□□□□□ -0.61
USP11-206ENST00000469080 FAM53BQ14153 422 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 ELOA3BQ3SY89 546 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 TMEM91Q6ZNR0 172 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 PGAP1Q75T13 922 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 TIPARPQ7Z3E1 657 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms