RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 LINC01590Q5TEZ4 76 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 C19orf48Q6RUI8 117 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 C5orf46Q6UWT4 87 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 LINC00696Q6ZRV3 163 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 CDH24Q86UP0 819 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 OR4K17Q8NGC6 315 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 SMAP2Q8WU79 429 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-208ENST00000468300 THAP4Q8WY91 577 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 AKAP1Q92667 903 aaKnown RBP eCLIP7.4□□□□□ -1.22
BRCA1-208ENST00000468300 PHF21AQ96BD5 680 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 ISOC1Q96CN7 298 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 C5orf34Q96MH7 638 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 ADGRL4Q9HBW9 690 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 MGAQ8IWI9 3026 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 OR2M5A3KFT3 312 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 RAMP1O60894 148 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 SLC25A12O75746 678 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 PSKH1P11801 424 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 CTXN1P60606 82 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 H3F3AP84243 136 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 OR1C1Q15619 314 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 ZNF239Q16600 458 aaKnown RBP7.4□□□□□ -1.22
BRCA1-208ENST00000468300 CTF1Q16619 201 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 C3orf33Q6P1S2 294 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 LYPD4Q6UWN0 246 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 IGFL2Q6UWQ7 119 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 GPR141Q7Z602 305 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 SULF2Q8IWU5 870 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 ELMOD2Q8IZ81 293 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 KDM8Q8N371 416 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 RFLNBQ8N5W9 214 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 CLEC1AQ8NC01 280 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 OR2M7Q8NG81 312 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 OR9Q1Q8NGQ5 310 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 DDIT4LQ96D03 193 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 SEC22CQ9BRL7 303 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 FUNDC2Q9BWH2 189 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 TMEM185BQ9H7F4 350 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 ASB6Q9NWX5 421 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 HAO2Q9NYQ3 351 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 MED12Q93074 2177 aa7.4□□□□□ -1.23
BRCA1-208ENST00000468300 A0A1W2PNR3 127 aa7.4□□□□□ -1.23
BRCA1-208ENST00000468300 GLSO94925 669 aaPredicted RBP7.4□□□□□ -1.23
BRCA1-208ENST00000468300 P04436 131 aa7.4□□□□□ -1.23
BRCA1-208ENST00000468300 ZNF17P17021 662 aa7.4□□□□□ -1.23
BRCA1-208ENST00000468300 M6PRP20645 277 aa7.4□□□□□ -1.23
BRCA1-208ENST00000468300 EIF1P41567 113 aaKnown RBP7.4□□□□□ -1.23
BRCA1-208ENST00000468300 GFRA1P56159 465 aa7.4□□□□□ -1.23
BRCA1-208ENST00000468300 CAMK2DQ13557 499 aa7.4□□□□□ -1.23
BRCA1-208ENST00000468300 GGTLC2Q14390 218 aa7.4□□□□□ -1.23
BRCA1-208ENST00000468300 OR7A5Q15622 319 aa7.4□□□□□ -1.23
BRCA1-208ENST00000468300 GPR107Q5VW38 600 aa7.4□□□□□ -1.23
BRCA1-208ENST00000468300 GGNQ86UU5 652 aa7.4□□□□□ -1.23
BRCA1-208ENST00000468300 STX19Q8N4C7 294 aa7.4□□□□□ -1.23
BRCA1-208ENST00000468300 FAM83FQ8NEG4 500 aaPredicted RBP7.4□□□□□ -1.23
BRCA1-208ENST00000468300 ATP6V1C2Q8NEY4 427 aa7.4□□□□□ -1.23
BRCA1-208ENST00000468300 TSSK2Q96PF2 358 aa7.4□□□□□ -1.23
BRCA1-208ENST00000468300 PRRG3Q9BZD7 231 aa7.4□□□□□ -1.23
BRCA1-208ENST00000468300 PTGES2Q9H7Z7 377 aa7.4□□□□□ -1.23
BRCA1-208ENST00000468300 TBCCD1Q9NVR7 557 aa7.4□□□□□ -1.23
BRCA1-208ENST00000468300 KLHL21Q9UJP4 597 aa7.4□□□□□ -1.23
BRCA1-208ENST00000468300 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.4□□□□□ -1.23
BRCA1-208ENST00000468300 MRPS7Q9Y2R9 242 aaKnown RBP7.4□□□□□ -1.23
BRCA1-208ENST00000468300 MRPS18CQ9Y3D5 142 aaKnown RBP7.4□□□□□ -1.23
BRCA1-208ENST00000468300 A0A1W2PNV4 684 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 A6NL46 340 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 A6NLC8 198 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 PRR23D1E9PI22 279 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-208ENST00000468300 H3BMQ9 156 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 LDLRAD4O15165 306 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 CEACAM4O75871 244 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 ATE1O95260 518 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 RAB36O95755 333 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 TFP02787 698 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 CELA3AP09093 270 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 PRR23D2P0DMB1 279 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-208ENST00000468300 RPL4P36578 427 aaKnown RBP7.39□□□□□ -1.23
BRCA1-208ENST00000468300 CDC20Q12834 499 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 SELENBP1Q13228 472 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 AQP6Q13520 282 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 SSX1Q16384 188 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 ABHD17BQ5VST6 288 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 ATCAYQ86WG3 371 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 TMEM99Q8N816 258 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 FDCSPQ8NFU4 85 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 TM9SF4Q92544 642 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 SCMH1Q96GD3 660 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 JSRP1Q96MG2 331 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-208ENST00000468300 OPALINQ96PE5 141 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 MARCH7Q9H992 704 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 NDUFA13Q9P0J0 144 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 SLC6A5Q9Y345 797 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 RIIAD1A6NNX1 92 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 PRSS44E7EML9 344 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 C11orf98E9PRG8 122 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 H7C1C5 153 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 OR2T1O43869 369 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 NME2P1O60361 137 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 AKR7A3O95154 331 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 AHSA1O95433 338 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms