RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 ECHDC2Q86YB7 292 aa2□□□□□ -2.09
ATG3-204ENST00000467275 TGIF2LXQ8IUE1 241 aa2□□□□□ -2.09
ATG3-204ENST00000467275 NUDCD3Q8IVD9 361 aa2□□□□□ -2.09
ATG3-204ENST00000467275 PIANPQ8IYJ0 282 aa2□□□□□ -2.09
ATG3-204ENST00000467275 FGF14Q92915 247 aa2□□□□□ -2.09
ATG3-204ENST00000467275 TBRG4Q969Z0 631 aaKnown RBP eCLIP2□□□□□ -2.09
ATG3-204ENST00000467275 C12orf42Q96LP6 360 aa2□□□□□ -2.09
ATG3-204ENST00000467275 FAIM2Q9BWQ8 316 aa2□□□□□ -2.09
ATG3-204ENST00000467275 DEFB127Q9H1M4 99 aa2□□□□□ -2.09
ATG3-204ENST00000467275 LY9Q9HBG7 655 aa2□□□□□ -2.09
ATG3-204ENST00000467275 GIN1Q9NXP7 522 aa2□□□□□ -2.09
ATG3-204ENST00000467275 QPCTLQ9NXS2 382 aa2□□□□□ -2.09
ATG3-204ENST00000467275 SUN2Q9UH99 717 aa2□□□□□ -2.09
ATG3-204ENST00000467275 HPCAL4Q9UM19 191 aa2□□□□□ -2.09
ATG3-204ENST00000467275 SLC25A15Q9Y619 301 aa2□□□□□ -2.09
ATG3-204ENST00000467275 NPTNQ9Y639 398 aa2□□□□□ -2.09
ATG3-204ENST00000467275 IKBKGQ9Y6K9 419 aa2□□□□□ -2.09
ATG3-204ENST00000467275 ITGB4P16144 1822 aa2□□□□□ -2.09
ATG3-204ENST00000467275 CARMIL3Q8ND23 1372 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 COL27A1Q8IZC6 1860 aaPredicted RBP1.99□□□□□ -2.09
ATG3-204ENST00000467275 NUP214P35658 2090 aaPredicted RBP1.99□□□□□ -2.09
ATG3-204ENST00000467275 CCDC182A6NF36 153 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 OR7A10O76100 309 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 SNX4O95219 450 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 TMEM50AO95807 157 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 KLK3P07288 261 aaPredicted RBP1.99□□□□□ -2.09
ATG3-204ENST00000467275 NCF2P19878 526 aaPredicted RBP1.99□□□□□ -2.09
ATG3-204ENST00000467275 MX1P20591 662 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 PBLDP30039 288 aaPredicted RBP1.99□□□□□ -2.09
ATG3-204ENST00000467275 RDXP35241 583 aaKnown RBP1.99□□□□□ -2.09
ATG3-204ENST00000467275 VHLP40337 213 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 GSSP48637 474 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 GPM6AP51674 278 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 BST1Q10588 318 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 PPIL2Q13356 520 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 GK3PQ14409 553 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 CYTH1Q15438 398 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 IMMTQ16891 758 aaKnown RBP1.99□□□□□ -2.09
ATG3-204ENST00000467275 C1orf94Q6P1W5 598 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 Q6ZN92 141 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 SLC25A48Q6ZT89 311 aaKnown RBP1.99□□□□□ -2.09
ATG3-204ENST00000467275 UTS2BQ765I0 119 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 PSTKQ8IV42 348 aaKnown RBP1.99□□□□□ -2.09
ATG3-204ENST00000467275 ACOT11Q8WXI4 607 aaPredicted RBP1.99□□□□□ -2.09
ATG3-204ENST00000467275 FBXO32Q969P5 355 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 PLEKHA8Q96JA3 519 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 TCEANC2Q96MN5 208 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 PANX2Q96RD6 677 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 CNN2Q99439 309 aaKnown RBP1.99□□□□□ -2.09
ATG3-204ENST00000467275 FMO2Q99518 471 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 TMEM246Q9BRR3 403 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 RIOK2Q9BVS4 552 aaKnown RBP1.99□□□□□ -2.09
ATG3-204ENST00000467275 ACTR6Q9GZN1 396 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 PPA2Q9H2U2 334 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 SRMSQ9H3Y6 488 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 RANBP3Q9H6Z4 567 aaPredicted RBP1.99□□□□□ -2.09
ATG3-204ENST00000467275 METTL7AQ9H8H3 244 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 CLCF1Q9UBD9 225 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 ZNF229Q9UJW7 825 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 ZNF222Q9UK12 451 aa1.99□□□□□ -2.09
ATG3-204ENST00000467275 FANCIQ9NVI1 1328 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 XKRY2A2RUG3 117 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 RBMY1BA6NDE4 496 aaKnown RBP1.98□□□□□ -2.09
ATG3-204ENST00000467275 RBMY1EA6NEQ0 496 aaKnown RBP1.98□□□□□ -2.09
ATG3-204ENST00000467275 ZNF705GA8MUZ8 300 aaPredicted RBP1.98□□□□□ -2.09
ATG3-204ENST00000467275 C12orf77C9JDV5 145 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 TOM1O60784 492 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 VAMP5O95183 116 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 C1orf105O95561 183 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 IGLV2-23P01705 113 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 FGF1P05230 155 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 RBMY1DP0C7P1 496 aaKnown RBP1.98□□□□□ -2.09
ATG3-204ENST00000467275 RBMY1A1P0DJD3 496 aaKnown RBP1.98□□□□□ -2.09
ATG3-204ENST00000467275 SLC2A3P11169 496 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 FDFT1P37268 417 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 CRYBB2P43320 205 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 GYG1P46976 350 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 ACVR1Q04771 509 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 LRRC74AQ0VAA2 488 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 MRPL28Q13084 256 aaKnown RBP1.98□□□□□ -2.09
ATG3-204ENST00000467275 RABL6Q3YEC7 729 aaPredicted RBP1.98□□□□□ -2.09
ATG3-204ENST00000467275 PRAMEF5Q5TYX0 476 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 PRAMEF6Q5VXH4 476 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 CDR2LQ86X02 465 aaPredicted RBP1.98□□□□□ -2.09
ATG3-204ENST00000467275 NBPF5PQ86XG9 351 aaPredicted RBP1.98□□□□□ -2.09
ATG3-204ENST00000467275 ACOT4Q8N9L9 421 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 FNDC5Q8NAU1 212 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 SDR9C7Q8NEX9 313 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 OR4F15Q8NGB8 312 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 OR1L6Q8NGR2 347 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 PYROXD1Q8WU10 500 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 TUBGCP3Q96CW5 907 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 KRTAP4-1Q9BYQ7 146 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 GBA3Q9H227 469 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 NT5MQ9NPB1 228 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 IL26Q9NPH9 171 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 ZNF586Q9NXT0 402 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 KCNIP1Q9NZI2 227 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 MMP17Q9ULZ9 603 aa1.98□□□□□ -2.09
ATG3-204ENST00000467275 UBIAD1Q9Y5Z9 338 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms