RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 TFAP2CQ92754 450 aa11.73□□□□□ -0.53
PDCD11-202ENST00000466959 TMEM54Q969K7 222 aa11.73□□□□□ -0.53
PDCD11-202ENST00000466959 LRR1Q96L50 414 aa11.73□□□□□ -0.53
PDCD11-202ENST00000466959 ZNF184Q99676 751 aaPredicted RBP11.73□□□□□ -0.53
PDCD11-202ENST00000466959 LINC00470Q9BZP3 86 aa11.73□□□□□ -0.53
PDCD11-202ENST00000466959 C12orf49Q9H741 205 aa11.73□□□□□ -0.53
PDCD11-202ENST00000466959 IMPAD1Q9NX62 359 aa11.73□□□□□ -0.53
PDCD11-202ENST00000466959 VSX1Q9NZR4 365 aaPredicted RBP11.73□□□□□ -0.53
PDCD11-202ENST00000466959 FOXD3Q9UJU5 478 aaPredicted RBP11.73□□□□□ -0.53
PDCD11-202ENST00000466959 ICE1Q9Y2F5 2266 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 NCOA6Q14686 2063 aaPredicted RBP11.72□□□□□ -0.53
PDCD11-202ENST00000466959 SLC22A23A1A5C7 686 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 A1L4Q6 167 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 H7C1C5 153 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 M0R129 80 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 PRKYO43930 277 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 NR2C1P13056 603 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 EDNRAP25101 427 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 LCN6P62502 163 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 EFNB1P98172 346 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 CD47Q08722 323 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 ITGADQ13349 1161 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 IL18R1Q13478 541 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 CRMP1Q14194 572 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 HIST3H3Q16695 136 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 ZNF691Q5VV52 312 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 MTFR2Q6P444 385 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 TFAP2EQ6VUC0 442 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.72□□□□□ -0.53
PDCD11-202ENST00000466959 BTLAQ7Z6A9 289 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 CCDC71Q8IV32 467 aaPredicted RBP11.72□□□□□ -0.53
PDCD11-202ENST00000466959 DEPDC4Q8N2C3 294 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 GPR137CQ8N3F9 429 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 POMGNT2Q8NAT1 580 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 SYT14Q8NB59 555 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 SETD9Q8NE22 299 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 OR6N1Q8NGY5 312 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 TMEM163Q8TC26 289 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 NMD3Q96D46 503 aaKnown RBP11.72□□□□□ -0.53
PDCD11-202ENST00000466959 STARD4Q96DR4 205 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 NMNAT3Q96T66 252 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 DDOQ99489 341 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 APOL4Q9BPW4 351 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 PIGMQ9H3S5 423 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 FN3KQ9H479 309 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 B3GAT2Q9NPZ5 323 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 PLSCR4Q9NRQ2 329 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 GLTPQ9NZD2 209 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 ZNF629Q9UEG4 869 aaPredicted RBP11.72□□□□□ -0.53
PDCD11-202ENST00000466959 RAB26Q9ULW5 256 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 PROCRQ9UNN8 238 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 ALPK2Q86TB3 2170 aa11.72□□□□□ -0.53
PDCD11-202ENST00000466959 FREM1Q5H8C1 2179 aa11.71□□□□□ -0.53
PDCD11-202ENST00000466959 MYO7BQ6PIF6 2116 aa11.71□□□□□ -0.53
PDCD11-202ENST00000466959 OR6C68A6NDL8 312 aa11.71□□□□□ -0.53
PDCD11-202ENST00000466959 PRR23D1E9PI22 279 aaPredicted RBP11.71□□□□□ -0.53
PDCD11-202ENST00000466959 DVL2O14641 736 aa11.71□□□□□ -0.53
PDCD11-202ENST00000466959 LRRTM2O43300 516 aa11.71□□□□□ -0.53
PDCD11-202ENST00000466959 UPK3AO75631 287 aa11.71□□□□□ -0.53
PDCD11-202ENST00000466959 CGAP01215 116 aa11.71□□□□□ -0.53
PDCD11-202ENST00000466959 PRR23D2P0DMB1 279 aaPredicted RBP11.71□□□□□ -0.53
PDCD11-202ENST00000466959 CD8BP10966 210 aa11.71□□□□□ -0.53
PDCD11-202ENST00000466959 PAICSP22234 425 aaKnown RBP11.71□□□□□ -0.53
PDCD11-202ENST00000466959 ZNF133P52736 654 aaPredicted RBP11.71□□□□□ -0.53
PDCD11-202ENST00000466959 ADORA2A-AS1P86434 159 aa11.71□□□□□ -0.53
PDCD11-202ENST00000466959 LGALS3BPQ08380 585 aa11.71□□□□□ -0.53
PDCD11-202ENST00000466959 THEM4Q5T1C6 240 aa11.71□□□□□ -0.53
PDCD11-202ENST00000466959 TSPO2Q5TGU0 170 aa11.71□□□□□ -0.53
PDCD11-202ENST00000466959 USP51Q70EK9 711 aa11.71□□□□□ -0.53
PDCD11-202ENST00000466959 TCEANCQ8N8B7 351 aa11.71□□□□□ -0.53
PDCD11-202ENST00000466959 CYB561A3Q8NBI2 242 aa11.71□□□□□ -0.53
PDCD11-202ENST00000466959 OR8J1Q8NGP2 316 aa11.71□□□□□ -0.53
PDCD11-202ENST00000466959 TRUB1Q8WWH5 349 aaKnown RBP11.71□□□□□ -0.53
PDCD11-202ENST00000466959 CCDC120Q96HB5 630 aa11.71□□□□□ -0.53
PDCD11-202ENST00000466959 RBP7Q96R05 134 aa11.71□□□□□ -0.53
PDCD11-202ENST00000466959 ULBP2Q9BZM5 246 aa11.71□□□□□ -0.53
PDCD11-202ENST00000466959 NMNAT2Q9BZQ4 307 aa11.71□□□□□ -0.53
PDCD11-202ENST00000466959 SYT4Q9H2B2 425 aa11.71□□□□□ -0.53
PDCD11-202ENST00000466959 SLC7A10Q9NS82 523 aa11.71□□□□□ -0.53
PDCD11-202ENST00000466959 ASB6Q9NWX5 421 aa11.71□□□□□ -0.53
PDCD11-202ENST00000466959 ZNF226Q9NYT6 803 aa11.71□□□□□ -0.53
PDCD11-202ENST00000466959 PRSS50Q9UI38 385 aa11.71□□□□□ -0.53
PDCD11-202ENST00000466959 RNF6Q9Y252 685 aa11.71□□□□□ -0.53
PDCD11-202ENST00000466959 M0R3G1 203 aa11.7□□□□□ -0.54
PDCD11-202ENST00000466959 TLX2O43763 284 aaPredicted RBP11.7□□□□□ -0.54
PDCD11-202ENST00000466959 MPZL2O60487 215 aa11.7□□□□□ -0.54
PDCD11-202ENST00000466959 KRT33AO76009 404 aa11.7□□□□□ -0.54
PDCD11-202ENST00000466959 CNOT4O95628 575 aaKnown RBP11.7□□□□□ -0.54
PDCD11-202ENST00000466959 CLIC3O95833 236 aa11.7□□□□□ -0.54
PDCD11-202ENST00000466959 GNAO1P09471 354 aa11.7□□□□□ -0.54
PDCD11-202ENST00000466959 SLC25A1P53007 311 aa11.7□□□□□ -0.54
PDCD11-202ENST00000466959 SNRPGP62308 76 aaKnown RBP11.7□□□□□ -0.54
PDCD11-202ENST00000466959 FMODQ06828 376 aa11.7□□□□□ -0.54
PDCD11-202ENST00000466959 PHYHD1Q5SRE7 291 aa11.7□□□□□ -0.54
PDCD11-202ENST00000466959 C10orf128Q5T292 105 aa11.7□□□□□ -0.54
PDCD11-202ENST00000466959 FBXW9Q5XUX1 488 aa11.7□□□□□ -0.54
PDCD11-202ENST00000466959 LRFN4Q6PJG9 635 aa11.7□□□□□ -0.54
PDCD11-202ENST00000466959 SLC25A47Q6Q0C1 308 aa11.7□□□□□ -0.54
PDCD11-202ENST00000466959 CXXC5Q7LFL8 322 aaKnown RBP11.7□□□□□ -0.54
PDCD11-202ENST00000466959 ABHD12BQ7Z5M8 362 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms