RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 RAB10P61026 200 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 MRPS22P82650 360 aaKnown RBP1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 SPAG1Q07617 926 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 TMED1Q13445 227 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 MADCAM1Q13477 382 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 DOC2AQ14183 400 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 MRPL23Q16540 153 aaKnown RBP1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 PIP5KL1Q5T9C9 394 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 C9orf135Q5VTT2 229 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 TWF2Q6IBS0 349 aaKnown RBP1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 TMEM220Q6QAJ8 160 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 RNF165Q6ZSG1 346 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 SLC25A48Q6ZT89 311 aaKnown RBP1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 SSX9Q7RTT3 188 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 ASCL5Q7RTU5 278 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 SLC16A14Q7RTX9 510 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 SCD5Q86SK9 330 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 ZNF546Q86UE3 836 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 SLC26A11Q86WA9 606 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 PLA2G4DQ86XP0 818 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 MFSD6LQ8IWD5 586 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 RDH10Q8IZV5 341 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 GABRG1Q8N1C3 465 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 MS4A15Q8N5U1 240 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 FNDC5Q8NAU1 212 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 OR52K1Q8NGK4 314 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 OR52I1Q8NGK6 324 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 OR4A4PQ8NGN8 299 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 GPR151Q8TDV0 419 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 ACMSDQ8TDX5 336 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 NRGNQ92686 78 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 CMTM7Q96FZ5 175 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 PAGE5Q96GU1 130 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 PGLYRP4Q96LB8 373 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 HSFY1Q96LI6 401 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 GSDMAQ96QA5 445 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 OR8B4Q96RC9 309 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 KCNA7Q96RP8 456 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 NAT9Q9BTE0 207 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 RNF126Q9BV68 326 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 TEKT3Q9BXF9 490 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 KRTAP4-1Q9BYQ7 146 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 SELENOIQ9C0D9 397 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 ACTR6Q9GZN1 396 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 CLSTN2Q9H4D0 955 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 ZDHHC11Q9H8X9 412 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 CYP3A43Q9HB55 503 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 FOLH1BQ9HBA9 442 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 C20orf96Q9NUD7 363 aaPredicted RBP1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 LYARQ9NX58 379 aaKnown RBP1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 GIN1Q9NXP7 522 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 TREM2Q9NZC2 230 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 CRCT1Q9UGL9 99 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 DCDC2Q9UHG0 476 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 ZNF225Q9UK10 706 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 TBC1D24Q9ULP9 559 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 MMP17Q9ULZ9 603 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 V9GY05 133 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 INSRP06213 1382 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 TNIKQ9UKE5 1360 aa1.43□□□□□ -2.18
GTF3C3-209ENST00000466862 IGKV1D-17A0A075B6S4 117 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 IGHV3OR16-13A0A075B7E8 117 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 IGKV1D-8A0A087WSZ0 117 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 NSG1A0A0A6YYJ2 146 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 RBMY1BA6NDE4 496 aaKnown RBP1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 A6NDX4 124 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 RBMY1EA6NEQ0 496 aaKnown RBP1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 LRRIQ3A6PVS8 624 aaPredicted RBP1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 K7N7A8 449 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 AIM2O14862 343 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 PPP1R2P9O14990 202 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 CHST1O43916 411 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 FGF1P05230 155 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 C2P06681 752 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 RBMY1DP0C7P1 496 aaKnown RBP1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 RBMY1A1P0DJD3 496 aaKnown RBP1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 CCNB1P14635 433 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 TCN1P20061 433 aaPredicted RBP1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 SLC2A5P22732 501 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 TUBG1P23258 451 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 STOMP27105 288 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 DCKP27707 260 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 AQP1P29972 269 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 HMOX2P30519 316 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 NAA10P41227 235 aaPredicted RBP1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 NSG1P42857 185 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 CDKN1BP46527 198 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 UQCRFS1P47985 274 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 RFX3P48380 749 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 SLC11A1P49279 550 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 TMED10P49755 219 aaKnown RBP1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 KLK7P49862 253 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 CCNHP51946 323 aaPredicted RBP1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 CARD18P57730 90 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 FBXW4P57775 412 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 SELENOTP62341 195 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 LIPEQ05469 1076 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 DNAJC3Q13217 504 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 SELENBP1Q13228 472 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 MAB21L1Q13394 359 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms