RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 HPXP02790 462 aa16.45■□□□□ 0.22
COL9A3-206ENST00000466532 ASAH2BP0C7U1 165 aa16.45■□□□□ 0.22
COL9A3-206ENST00000466532 PGA4P0DJD7 388 aa16.45■□□□□ 0.22
COL9A3-206ENST00000466532 PGA3P0DJD8 388 aa16.45■□□□□ 0.22
COL9A3-206ENST00000466532 INTS11Q5TA45 600 aaKnown RBP16.45■□□□□ 0.22
COL9A3-206ENST00000466532 REP15Q6BDI9 236 aa16.45■□□□□ 0.22
COL9A3-206ENST00000466532 LRFN4Q6PJG9 635 aa16.45■□□□□ 0.22
COL9A3-206ENST00000466532 NANOGNBQ7Z5D8 188 aa16.45■□□□□ 0.22
COL9A3-206ENST00000466532 ZNF426Q9BUY5 554 aa16.45■□□□□ 0.22
COL9A3-206ENST00000466532 PCDHAC1Q9H158 963 aa16.45■□□□□ 0.22
COL9A3-206ENST00000466532 RNF121Q9H920 327 aa16.45■□□□□ 0.22
COL9A3-206ENST00000466532 NPHS2Q9NP85 383 aa16.45■□□□□ 0.22
COL9A3-206ENST00000466532 A0A1W2PPW3 197 aa16.44■□□□□ 0.22
COL9A3-206ENST00000466532 HMGB1P1B2RPK0 211 aaPredicted RBP16.44■□□□□ 0.22
COL9A3-206ENST00000466532 BCL10O95999 233 aa16.44■□□□□ 0.22
COL9A3-206ENST00000466532 VIMP08670 466 aaKnown RBP16.44■□□□□ 0.22
COL9A3-206ENST00000466532 QDPRP09417 244 aa16.44■□□□□ 0.22
COL9A3-206ENST00000466532 COL8A2P25067 703 aa16.44■□□□□ 0.22
COL9A3-206ENST00000466532 SRP14P37108 136 aaKnown RBP16.44■□□□□ 0.22
COL9A3-206ENST00000466532 GPR6P46095 362 aaPredicted RBP16.44■□□□□ 0.22
COL9A3-206ENST00000466532 VMACQ2NL98 169 aa16.44■□□□□ 0.22
COL9A3-206ENST00000466532 SLC30A7Q8NEW0 376 aa16.44■□□□□ 0.22
COL9A3-206ENST00000466532 RASSF5Q8WWW0 418 aa16.44■□□□□ 0.22
COL9A3-206ENST00000466532 RDH5Q92781 318 aa16.44■□□□□ 0.22
COL9A3-206ENST00000466532 C1orf159Q96HA4 380 aa16.44■□□□□ 0.22
COL9A3-206ENST00000466532 PRSS27Q9BQR3 290 aa16.44■□□□□ 0.22
COL9A3-206ENST00000466532 ANK2Q01484 3957 aa16.43■□□□□ 0.22
COL9A3-206ENST00000466532 A0A0G2JND7 137 aa16.43■□□□□ 0.22
COL9A3-206ENST00000466532 BLOC1S5-TXNDC5H3BN57 136 aa16.43■□□□□ 0.22
COL9A3-206ENST00000466532 IGHG1P01857 330 aa16.43■□□□□ 0.22
COL9A3-206ENST00000466532 FAM157BP0CG42 384 aa16.43■□□□□ 0.22
COL9A3-206ENST00000466532 NAT2P11245 290 aa16.43■□□□□ 0.22
COL9A3-206ENST00000466532 ACHEP22303 614 aa16.43■□□□□ 0.22
COL9A3-206ENST00000466532 GZMMP51124 257 aa16.43■□□□□ 0.22
COL9A3-206ENST00000466532 CRYBA2P53672 197 aa16.43■□□□□ 0.22
COL9A3-206ENST00000466532 DVL1P1P54792 670 aaPredicted RBP16.43■□□□□ 0.22
COL9A3-206ENST00000466532 CLRN1P58418 232 aa16.43■□□□□ 0.22
COL9A3-206ENST00000466532 LIPNQ5VXI9 398 aa16.43■□□□□ 0.22
COL9A3-206ENST00000466532 RGS7BPQ6MZT1 257 aaPredicted RBP16.43■□□□□ 0.22
COL9A3-206ENST00000466532 TMEM53Q6P2H8 277 aa16.43■□□□□ 0.22
COL9A3-206ENST00000466532 CCDC80Q76M96 950 aa16.43■□□□□ 0.22
COL9A3-206ENST00000466532 SLC16A14Q7RTX9 510 aa16.43■□□□□ 0.22
COL9A3-206ENST00000466532 CARM1Q86X55 608 aa16.43■□□□□ 0.22
COL9A3-206ENST00000466532 OR4K5Q8NGD3 323 aa16.43■□□□□ 0.22
COL9A3-206ENST00000466532 NARFLQ9H6Q4 476 aa16.43■□□□□ 0.22
COL9A3-206ENST00000466532 CDH20Q9HBT6 801 aa16.43■□□□□ 0.22
COL9A3-206ENST00000466532 MEPEQ9NQ76 525 aaPredicted RBP16.43■□□□□ 0.22
COL9A3-206ENST00000466532 ZNF346Q9UL40 294 aaKnown RBP16.43■□□□□ 0.22
COL9A3-206ENST00000466532 SLC22A23A1A5C7 686 aa16.42■□□□□ 0.22
COL9A3-206ENST00000466532 EDF1O60869 148 aaKnown RBP16.42■□□□□ 0.22
COL9A3-206ENST00000466532 CCL2P13500 99 aa16.42■□□□□ 0.22
COL9A3-206ENST00000466532 ZNF84P51523 738 aa16.42■□□□□ 0.22
COL9A3-206ENST00000466532 MYBPC1Q00872 1141 aa16.42■□□□□ 0.22
COL9A3-206ENST00000466532 NKPD1Q17RQ9 610 aa16.42■□□□□ 0.22
COL9A3-206ENST00000466532 ALKBH6Q3KRA9 238 aa16.42■□□□□ 0.22
COL9A3-206ENST00000466532 SLC36A2Q495M3 483 aa16.42■□□□□ 0.22
COL9A3-206ENST00000466532 RINLQ6ZS11 566 aa16.42■□□□□ 0.22
COL9A3-206ENST00000466532 DPPA2Q7Z7J5 298 aa16.42■□□□□ 0.22
COL9A3-206ENST00000466532 PAQR4Q8N4S7 273 aaPredicted RBP16.42■□□□□ 0.22
COL9A3-206ENST00000466532 RFLNBQ8N5W9 214 aa16.42■□□□□ 0.22
COL9A3-206ENST00000466532 CLDND2Q8NHS1 167 aa16.42■□□□□ 0.22
COL9A3-206ENST00000466532 YIPF5Q969M3 257 aa16.42■□□□□ 0.22
COL9A3-206ENST00000466532 MCHR2Q969V1 340 aa16.42■□□□□ 0.22
COL9A3-206ENST00000466532 ZNF347Q96SE7 839 aa16.42■□□□□ 0.22
COL9A3-206ENST00000466532 SIKE1Q9BRV8 207 aa16.42■□□□□ 0.22
COL9A3-206ENST00000466532 OR51B6Q9H340 312 aa16.42■□□□□ 0.22
COL9A3-206ENST00000466532 SH3GLB1Q9Y371 365 aa16.42■□□□□ 0.22
COL9A3-206ENST00000466532 A0A1W2PRG6 482 aa16.41■□□□□ 0.22
COL9A3-206ENST00000466532 B4DSR2 109 aa16.41■□□□□ 0.22
COL9A3-206ENST00000466532 MCIDASD6RGH6 385 aa16.41■□□□□ 0.22
COL9A3-206ENST00000466532 FBP2O00757 339 aa16.41■□□□□ 0.22
COL9A3-206ENST00000466532 TCF21O43680 179 aa16.41■□□□□ 0.22
COL9A3-206ENST00000466532 NCR1O76036 304 aa16.41■□□□□ 0.22
COL9A3-206ENST00000466532 CLPTM1O96005 669 aa16.41■□□□□ 0.22
COL9A3-206ENST00000466532 MT-ND1P03886 318 aa16.41■□□□□ 0.22
COL9A3-206ENST00000466532 F13BP05160 661 aa16.41■□□□□ 0.22
COL9A3-206ENST00000466532 SAGP10523 405 aaPredicted RBP16.41■□□□□ 0.22
COL9A3-206ENST00000466532 PCMT1P22061 227 aa16.41■□□□□ 0.22
COL9A3-206ENST00000466532 TAS2R41P59536 307 aa16.41■□□□□ 0.22
COL9A3-206ENST00000466532 RUNX1T1Q06455 604 aa16.41■□□□□ 0.22
COL9A3-206ENST00000466532 RPL18Q07020 188 aaKnown RBP16.41■□□□□ 0.22
COL9A3-206ENST00000466532 CYLC2Q14093 348 aaPredicted RBP16.41■□□□□ 0.22
COL9A3-206ENST00000466532 HIST3H3Q16695 136 aa16.41■□□□□ 0.22
COL9A3-206ENST00000466532 TBC1D28Q2M2D7 210 aa16.41■□□□□ 0.22
COL9A3-206ENST00000466532 NANOGP8Q6NSW7 305 aa16.41■□□□□ 0.22
COL9A3-206ENST00000466532 GLCCI1Q86VQ1 547 aa16.41■□□□□ 0.22
COL9A3-206ENST00000466532 NOXO1Q8NFA2 376 aa16.41■□□□□ 0.22
COL9A3-206ENST00000466532 PFN4Q8NHR9 129 aa16.41■□□□□ 0.22
COL9A3-206ENST00000466532 C1orf198Q9H425 327 aa16.41■□□□□ 0.22
COL9A3-206ENST00000466532 NANOGQ9H9S0 305 aa16.41■□□□□ 0.22
COL9A3-206ENST00000466532 ZNF275Q9NSD4 429 aaPredicted RBP16.41■□□□□ 0.22
COL9A3-206ENST00000466532 TAAR3PQ9P1P4 343 aa16.41■□□□□ 0.22
COL9A3-206ENST00000466532 OR7A10O76100 309 aa16.4■□□□□ 0.22
COL9A3-206ENST00000466532 PTHP01270 115 aa16.4■□□□□ 0.22
COL9A3-206ENST00000466532 LCKP06239 509 aa16.4■□□□□ 0.22
COL9A3-206ENST00000466532 FUT1P19526 365 aa16.4■□□□□ 0.22
COL9A3-206ENST00000466532 TNFRSF1BP20333 461 aa16.4■□□□□ 0.22
COL9A3-206ENST00000466532 MAGEB1P43366 347 aa16.4■□□□□ 0.22
COL9A3-206ENST00000466532 UGT2B15P54855 530 aa16.4■□□□□ 0.22
COL9A3-206ENST00000466532 KLF3P57682 345 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms