RNA–Protein interactions for RNA: ENST00000466048.6

USP54-210, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 4,674 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-210ENST00000466048 PHYHO14832 338 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 ARPC1BO15143 372 aaKnown RBP7.01□□□□□ -1.29
USP54-210ENST00000466048 EIF4E2O60573 245 aaKnown RBP7.01□□□□□ -1.29
USP54-210ENST00000466048 AKAIN1P0CW23 69 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 PIPP12273 146 aaPredicted RBP7.01□□□□□ -1.29
USP54-210ENST00000466048 PSMB1P20618 241 aaKnown RBP7.01□□□□□ -1.29
USP54-210ENST00000466048 ETV5P41161 510 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 LSSP48449 732 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 FXYD6P3P58550 94 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 SLC26A5P58743 744 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 SLC35A2P78381 396 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 MAP4K2Q12851 820 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 SELENBP1Q13228 472 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 ALG10Q5BKT4 473 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 CLLU1Q5K131 121 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 DCST2Q5T1A1 773 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 MED25Q71SY5 747 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 DPPA2Q7Z7J5 298 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 FOXRED2Q8IWF2 684 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 SLC43A2Q8N370 569 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 JAGN1Q8N5M9 183 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 DOK4Q8TEW6 326 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 CDS1Q92903 461 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 C16orf58Q96GQ5 468 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 LIN37Q96GY3 246 aaPredicted RBP7.01□□□□□ -1.29
USP54-210ENST00000466048 DCLRE1CQ96SD1 692 aaKnown RBP7.01□□□□□ -1.29
USP54-210ENST00000466048 APMAPQ9HDC9 416 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 KPTNQ9Y664 436 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 MYO10Q9HD67 2058 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 DSPPQ9NZW4 1301 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 RPS10-NUDT3A0A1W2PQS6 291 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 ZAR1LA6NP61 321 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 TPST2O60704 377 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 HTR3BO95264 441 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 DDAH2O95865 285 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 SCGB1D2O95969 90 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 ZGLP1P0C6A0 271 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 OR8U9P0C7N5 309 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 POU3F2P20265 443 aaPredicted RBP7.01□□□□□ -1.29
USP54-210ENST00000466048 RPS10P46783 165 aaKnown RBP7.01□□□□□ -1.29
USP54-210ENST00000466048 KLBQ86Z14 1044 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 RNF113BQ8IZP6 322 aaKnown RBP7.01□□□□□ -1.29
USP54-210ENST00000466048 ZNF687Q8N1G0 1237 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 GPR137CQ8N3F9 429 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 ZBTB44Q8NCP5 570 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 B3GNT7Q8NFL0 401 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 OR9Q2Q8NGE9 314 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 APOBEC4Q8WW27 367 aaKnown RBP7.01□□□□□ -1.29
USP54-210ENST00000466048 SLC35A4Q96G79 324 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 DOK1Q99704 481 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 PIGQQ9BRB3 760 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 NUDT22Q9BRQ3 303 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 ATG5Q9H1Y0 275 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 SLC25A32Q9H2D1 315 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 RXFP3Q9NSD7 469 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 TESQ9UGI8 421 aaKnown RBP7.01□□□□□ -1.29
USP54-210ENST00000466048 PSORS1C1Q9UIG5 152 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 GPR160Q9UJ42 338 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 A6NIZ1 184 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 M0R129 80 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 CYR61O00622 381 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 SEC14L5O43304 696 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 C1QCP02747 245 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 RAP1BP61224 184 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 RAP1AP62834 184 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 TOR2AQ5JU69 321 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 LPCAT3Q6P1A2 487 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 KCTD18Q6PI47 426 aaPredicted RBP7.01□□□□□ -1.29
USP54-210ENST00000466048 LINC00696Q6ZRV3 163 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 ZNF101Q8IZC7 436 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 ZNF709Q8N972 641 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 GATSQ8NAP1 163 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 SUMF2Q8NBJ7 301 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 OR4K5Q8NGD3 323 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 GRHL3Q8TE85 626 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 RAB39BQ96DA2 213 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 PRRT1Q99946 306 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 URM1Q9BTM9 101 aaKnown RBP7.01□□□□□ -1.29
USP54-210ENST00000466048 SAP130Q9H0E3 1048 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 METTL17Q9H7H0 456 aaPredicted RBP7.01□□□□□ -1.29
USP54-210ENST00000466048 WDR54Q9H977 334 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 TUBG2Q9NRH3 451 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 ADAM18Q9Y3Q7 739 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 TRBV4-1A0A0J9YWV2 114 aa7□□□□□ -1.29
USP54-210ENST00000466048 FAM230AA0A1W2PPH8 454 aa7□□□□□ -1.29
USP54-210ENST00000466048 ARGFXA6NJG6 315 aa7□□□□□ -1.29
USP54-210ENST00000466048 CD8B2A6NJW9 211 aa7□□□□□ -1.29
USP54-210ENST00000466048 J3KTA2 159 aa7□□□□□ -1.29
USP54-210ENST00000466048 M0R3H8 397 aa7□□□□□ -1.29
USP54-210ENST00000466048 B4GAT1O43505 415 aa7□□□□□ -1.29
USP54-210ENST00000466048 HCRTR1O43613 425 aa7□□□□□ -1.29
USP54-210ENST00000466048 CD8BP10966 210 aa7□□□□□ -1.29
USP54-210ENST00000466048 SPI1P17947 270 aa7□□□□□ -1.29
USP54-210ENST00000466048 GIFP27352 417 aa7□□□□□ -1.29
USP54-210ENST00000466048 MAP2K6P52564 334 aa7□□□□□ -1.29
USP54-210ENST00000466048 ERV3-1Q14264 604 aa7□□□□□ -1.29
USP54-210ENST00000466048 LTB4RQ15722 352 aa7□□□□□ -1.29
USP54-210ENST00000466048 TMEM41BQ5BJD5 291 aa7□□□□□ -1.29
USP54-210ENST00000466048 PODNL1Q6PEZ8 512 aa7□□□□□ -1.29
USP54-210ENST00000466048 SENP5Q96HI0 755 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms