RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 EPPK1P58107 5090 aaKnown RBP8.32□□□□□ -1.08
USP39-212ENST00000465514 PRORSD1PA6NEY8 169 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 LRRN3E7EW58 273 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 M0QZ24 198 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 SERPINI2O75830 405 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 RAB36O95755 333 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 PATE4P0C8F1 98 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 PPIBP23284 216 aaKnown RBP8.31□□□□□ -1.08
USP39-212ENST00000465514 AHCYP23526 432 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 SLC6A2P23975 617 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 FPR2P25090 351 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 GPR6P46095 362 aaPredicted RBP8.31□□□□□ -1.08
USP39-212ENST00000465514 MRPL19P49406 292 aaKnown RBP8.31□□□□□ -1.08
USP39-212ENST00000465514 SEC24CP53992 1094 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 CDH12P55289 794 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 RGS8P57771 180 aaPredicted RBP8.31□□□□□ -1.08
USP39-212ENST00000465514 STX1BP61266 288 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 MAGOHP61326 146 aaKnown RBP8.31□□□□□ -1.08
USP39-212ENST00000465514 GALK2Q01415 458 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 ZP4Q12836 540 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 SCARB2Q14108 478 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 RAB39AQ14964 217 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 MAD2L1BPQ15013 274 aaPredicted RBP8.31□□□□□ -1.08
USP39-212ENST00000465514 FXNQ16595 210 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 PAGE3Q5JUK9 113 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 LEG1Q6P5S2 330 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 BLOC1S3Q6QNY0 202 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 PXKQ7Z7A4 578 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 SNX32Q86XE0 403 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 FGFBP3Q8TAT2 258 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 WFDC12Q8WWY7 111 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 RDH5Q92781 318 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 UBE2FQ969M7 185 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 SPDL1Q96EA4 605 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 C1orf147Q96MC9 270 aaPredicted RBP8.31□□□□□ -1.08
USP39-212ENST00000465514 ZNF607Q96SK3 696 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 FOXB1Q99853 325 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 TMEM43Q9BTV4 400 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 RACGAP1Q9H0H5 632 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 IKZF5Q9H5V7 419 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 DENND2DQ9H6A0 471 aaPredicted RBP8.31□□□□□ -1.08
USP39-212ENST00000465514 ZMAT3Q9HA38 289 aaKnown RBP8.31□□□□□ -1.08
USP39-212ENST00000465514 VAPAQ9P0L0 249 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 MYEF2Q9P2K5 600 aaKnown RBP8.31□□□□□ -1.08
USP39-212ENST00000465514 SLC13A4Q9UKG4 626 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 BIRC6Q9NR09 4857 aa8.31□□□□□ -1.08
USP39-212ENST00000465514 TRBV5-3A0A0A0MS03 114 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 A0A0G2JMP0 313 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 A0A0X1KG70 313 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 C11orf98E9PRG8 122 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 SERPINB7O75635 380 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 UBL3O95164 117 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 ADORA3P0DMS8 318 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 NAT2P11245 290 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 GPX2P18283 190 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 ACHEP22303 614 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 OMGP23515 440 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 AQP1P29972 269 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 CSNK1A1P48729 337 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 BIDP55957 195 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 LMO4P61968 165 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 RPS23P62266 143 aaKnown RBP8.3□□□□□ -1.08
USP39-212ENST00000465514 REP15Q6BDI9 236 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 PIWIL3Q7Z3Z3 882 aaKnown RBP8.3□□□□□ -1.08
USP39-212ENST00000465514 RANBP3LQ86VV4 465 aaPredicted RBP8.3□□□□□ -1.08
USP39-212ENST00000465514 ARMC8Q8IUR7 673 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 ZNF584Q8IVC4 421 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 SKA3Q8IX90 412 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 BHLHE22Q8NFJ8 381 aaPredicted RBP8.3□□□□□ -1.08
USP39-212ENST00000465514 OR4M2Q8NGB6 313 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 OR5J2Q8NH18 312 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 DVL3Q92997 716 aaPredicted RBP8.3□□□□□ -1.08
USP39-212ENST00000465514 YIPF5Q969M3 257 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 TLCD1Q96CP7 247 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 KRTAP17-1Q9BYP8 105 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 TMEM38AQ9H6F2 299 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 SLC52A3Q9NQ40 469 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 TCF7L2Q9NQB0 619 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 ZNF275Q9NSD4 429 aaPredicted RBP8.3□□□□□ -1.08
USP39-212ENST00000465514 CCDC167Q9P0B6 97 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 DUSP13Q9UII6 198 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 FBXL3Q9UKT7 428 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 GMEB1Q9Y692 573 aa8.3□□□□□ -1.08
USP39-212ENST00000465514 A0A1W2PPW3 197 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 EVPLLA8MZ36 301 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 POLR3GO15318 223 aaPredicted RBP8.29□□□□□ -1.08
USP39-212ENST00000465514 PPIHO43447 177 aaKnown RBP8.29□□□□□ -1.08
USP39-212ENST00000465514 NCR1O76036 304 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 MFN2O95140 757 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 OR6A2O95222 327 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 TGDSO95455 350 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 MT-ATP6P00846 226 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 FSHBP01225 129 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 PRB2P02812 416 aaPredicted RBP8.29□□□□□ -1.08
USP39-212ENST00000465514 SERPINA5P05154 406 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 RNASE1P07998 156 aaKnown RBP8.29□□□□□ -1.08
USP39-212ENST00000465514 LSP1P33241 339 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 IDH3AP50213 366 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 TMEM33P57088 247 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 ALKBH6Q3KRA9 238 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms