RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 FARS2O95363 451 aaKnown RBP12.36□□□□□ -0.43
SNRNP40-203ENST00000463988 BCL10O95999 233 aa12.36□□□□□ -0.43
SNRNP40-203ENST00000463988 TGFAP01135 160 aa12.36□□□□□ -0.43
SNRNP40-203ENST00000463988 IGHG1P01857 330 aa12.36□□□□□ -0.43
SNRNP40-203ENST00000463988 PGA4P0DJD7 388 aa12.36□□□□□ -0.43
SNRNP40-203ENST00000463988 PGA3P0DJD8 388 aa12.36□□□□□ -0.43
SNRNP40-203ENST00000463988 RBM34P42696 430 aaKnown RBP12.36□□□□□ -0.43
SNRNP40-203ENST00000463988 RAB39AQ14964 217 aa12.36□□□□□ -0.43
SNRNP40-203ENST00000463988 HIST3H3Q16695 136 aa12.36□□□□□ -0.43
SNRNP40-203ENST00000463988 GKAP1Q5VSY0 366 aaPredicted RBP12.36□□□□□ -0.43
SNRNP40-203ENST00000463988 ERICH5Q6P6B1 374 aa12.36□□□□□ -0.43
SNRNP40-203ENST00000463988 HDDC2Q7Z4H3 204 aa12.36□□□□□ -0.43
SNRNP40-203ENST00000463988 NANOGNBQ7Z5D8 188 aa12.36□□□□□ -0.43
SNRNP40-203ENST00000463988 ZNF584Q8IVC4 421 aa12.36□□□□□ -0.43
SNRNP40-203ENST00000463988 LRRC58Q96CX6 371 aa12.36□□□□□ -0.43
SNRNP40-203ENST00000463988 C1orf159Q96HA4 380 aa12.36□□□□□ -0.43
SNRNP40-203ENST00000463988 SEPHS2Q99611 448 aa12.36□□□□□ -0.43
SNRNP40-203ENST00000463988 C1orf198Q9H425 327 aa12.36□□□□□ -0.43
SNRNP40-203ENST00000463988 CHODLQ9H9P2 273 aa12.36□□□□□ -0.43
SNRNP40-203ENST00000463988 MEPEQ9NQ76 525 aaPredicted RBP12.36□□□□□ -0.43
SNRNP40-203ENST00000463988 SLC7A8Q9UHI5 535 aa12.36□□□□□ -0.43
SNRNP40-203ENST00000463988 SLC22A23A1A5C7 686 aa12.35□□□□□ -0.43
SNRNP40-203ENST00000463988 LRP5LA4QPB2 252 aa12.35□□□□□ -0.43
SNRNP40-203ENST00000463988 BBIP1A8MTZ0 92 aa12.35□□□□□ -0.43
SNRNP40-203ENST00000463988 FXYD1O00168 92 aa12.35□□□□□ -0.43
SNRNP40-203ENST00000463988 OR5F1O95221 314 aa12.35□□□□□ -0.43
SNRNP40-203ENST00000463988 IFNA14P01570 189 aa12.35□□□□□ -0.43
SNRNP40-203ENST00000463988 MT-ND1P03886 318 aa12.35□□□□□ -0.43
SNRNP40-203ENST00000463988 QDPRP09417 244 aa12.35□□□□□ -0.43
SNRNP40-203ENST00000463988 H2AFXP16104 143 aaPredicted RBP12.35□□□□□ -0.43
SNRNP40-203ENST00000463988 MRPS11P82912 194 aaKnown RBP12.35□□□□□ -0.43
SNRNP40-203ENST00000463988 RABL3Q5HYI8 236 aa12.35□□□□□ -0.43
SNRNP40-203ENST00000463988 CARM1Q86X55 608 aa12.35□□□□□ -0.43
SNRNP40-203ENST00000463988 LIPHQ8WWY8 451 aa12.35□□□□□ -0.43
SNRNP40-203ENST00000463988 ECSITQ9BQ95 431 aa12.35□□□□□ -0.43
SNRNP40-203ENST00000463988 SOX7Q9BT81 388 aa12.35□□□□□ -0.43
SNRNP40-203ENST00000463988 TMEM120AQ9BXJ8 343 aa12.35□□□□□ -0.43
SNRNP40-203ENST00000463988 MRPL13Q9BYD1 178 aaKnown RBP12.35□□□□□ -0.43
SNRNP40-203ENST00000463988 ZNF346Q9UL40 294 aaKnown RBP12.35□□□□□ -0.43
SNRNP40-203ENST00000463988 SH3GLB1Q9Y371 365 aa12.35□□□□□ -0.43
SNRNP40-203ENST00000463988 A0A1W2PRG6 482 aa12.34□□□□□ -0.43
SNRNP40-203ENST00000463988 BLOC1S5-TXNDC5H3BN57 136 aa12.34□□□□□ -0.43
SNRNP40-203ENST00000463988 PTHP01270 115 aa12.34□□□□□ -0.43
SNRNP40-203ENST00000463988 TSPAN19P0C672 248 aa12.34□□□□□ -0.43
SNRNP40-203ENST00000463988 PATE4P0C8F1 98 aa12.34□□□□□ -0.43
SNRNP40-203ENST00000463988 THRBP10828 461 aa12.34□□□□□ -0.43
SNRNP40-203ENST00000463988 UMPSP11172 480 aa12.34□□□□□ -0.43
SNRNP40-203ENST00000463988 FUT1P19526 365 aa12.34□□□□□ -0.43
SNRNP40-203ENST00000463988 APEX1P27695 318 aaKnown RBP12.34□□□□□ -0.43
SNRNP40-203ENST00000463988 ZNF133P52736 654 aaPredicted RBP12.34□□□□□ -0.43
SNRNP40-203ENST00000463988 UGT2B15P54855 530 aa12.34□□□□□ -0.43
SNRNP40-203ENST00000463988 CLRN1P58418 232 aa12.34□□□□□ -0.43
SNRNP40-203ENST00000463988 MELKQ14680 651 aa12.34□□□□□ -0.43
SNRNP40-203ENST00000463988 MAPRE2Q15555 327 aa12.34□□□□□ -0.43
SNRNP40-203ENST00000463988 SLC36A2Q495M3 483 aa12.34□□□□□ -0.43
SNRNP40-203ENST00000463988 TMEM53Q6P2H8 277 aa12.34□□□□□ -0.43
SNRNP40-203ENST00000463988 LINC01356Q8N9X3 169 aa12.34□□□□□ -0.43
SNRNP40-203ENST00000463988 SLC30A7Q8NEW0 376 aa12.34□□□□□ -0.43
SNRNP40-203ENST00000463988 FGFBP3Q8TAT2 258 aa12.34□□□□□ -0.43
SNRNP40-203ENST00000463988 ZNF583Q96ND8 569 aa12.34□□□□□ -0.43
SNRNP40-203ENST00000463988 SH3GL3Q99963 347 aa12.34□□□□□ -0.43
SNRNP40-203ENST00000463988 SYT3Q9BQG1 590 aa12.34□□□□□ -0.43
SNRNP40-203ENST00000463988 TPK1Q9H3S4 243 aa12.34□□□□□ -0.43
SNRNP40-203ENST00000463988 STX18Q9P2W9 335 aaKnown RBP12.34□□□□□ -0.43
SNRNP40-203ENST00000463988 RIMS3Q9UJD0 308 aa12.34□□□□□ -0.43
SNRNP40-203ENST00000463988 HTR3EA5X5Y0 456 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 NPIPB13A6NJU9 1138 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 NPIPB4C9JG80 1138 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 MRASO14807 208 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 OR7A10O76100 309 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 SNAP29O95721 258 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 TROVE2P10155 538 aaKnown RBP eCLIP12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 ACHEP22303 614 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 ALDH3B1P43353 468 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 DAP3P51398 398 aaKnown RBP12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 ZNF84P51523 738 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 TMEM33P57088 247 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 TAS2R41P59536 307 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 SELENOVP59797 346 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 RPL18Q07020 188 aaKnown RBP12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 CR1LQ2VPA4 569 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 MMEL1Q495T6 779 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 ELFN2Q5R3F8 820 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 C10orf128Q5T292 105 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 SLC16A14Q7RTX9 510 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 LRP11Q86VZ4 500 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 NKAIN4Q8IVV8 208 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 NOXO1Q8NFA2 376 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 OR4K5Q8NGD3 323 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 OR1J2Q8NGS2 313 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 TMEM239Q8WW34 195 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 ASB10Q8WXI3 467 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 RDH5Q92781 318 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 MCHR2Q969V1 340 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 SGTBQ96EQ0 304 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 SNX18Q96RF0 628 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 INIPQ9NRY2 104 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 GPR160Q9UJ42 338 aa12.33□□□□□ -0.44
SNRNP40-203ENST00000463988 MCIDASD6RGH6 385 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 LYNX1G3V0Z9 82 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms