RNA–Protein interactions for RNA: ENST00000463032.5

LYRM4-204, Transcript of LYR motif containing 4, humanhuman

TSL 1 (best)

Gene LYRM4, Length 1,487 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4-204ENST00000463032 MRPL13Q9BYD1 178 aaKnown RBP11.85□□□□□ -0.51
LYRM4-204ENST00000463032 RIBC2Q9H4K1 309 aa11.85□□□□□ -0.51
LYRM4-204ENST00000463032 RERGLQ9H628 205 aa11.85□□□□□ -0.51
LYRM4-204ENST00000463032 NKX1-2Q9UD57 310 aaPredicted RBP11.85□□□□□ -0.51
LYRM4-204ENST00000463032 TMEFF2Q9UIK5 374 aaPredicted RBP11.85□□□□□ -0.51
LYRM4-204ENST00000463032 RRP15Q9Y3B9 282 aaKnown RBP11.85□□□□□ -0.51
LYRM4-204ENST00000463032 SPTAN1Q13813 2472 aaKnown RBP11.85□□□□□ -0.51
LYRM4-204ENST00000463032 UTP20O75691 2785 aaKnown RBP11.85□□□□□ -0.51
LYRM4-204ENST00000463032 IMPA2O14732 288 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 IDH3BO43837 385 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 SEC14L2O76054 403 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 SLC2A10O95528 541 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 TXNDC12O95881 172 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 ALPLP05186 524 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 CDKN2AP42771 156 aaKnown RBP11.84□□□□□ -0.51
LYRM4-204ENST00000463032 GIPRP48546 466 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 ESRRGP62508 458 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 ARF1P84077 181 aaKnown RBP11.84□□□□□ -0.51
LYRM4-204ENST00000463032 TGFBR3Q03167 851 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.84□□□□□ -0.51
LYRM4-204ENST00000463032 STK11Q15831 433 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 PGGHGQ32M88 737 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 TMEM236Q5W0B7 351 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 SLC27A4Q6P1M0 643 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 LEG1Q6P5S2 330 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 LRFN4Q6PJG9 635 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 PTCHD4Q6ZW05 846 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 ADCK1Q86TW2 530 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 LNX2Q8N448 690 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 ZNF433Q8N7K0 673 aaPredicted RBP11.84□□□□□ -0.51
LYRM4-204ENST00000463032 SDR9C7Q8NEX9 313 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 MCHR2Q969V1 340 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 NMNAT3Q96T66 252 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 SLC29A1Q99808 456 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 HDHD5Q9BXW7 423 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 ACTR6Q9GZN1 396 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 SYT4Q9H2B2 425 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 RASSF4Q9H2L5 321 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 ENOPH1Q9UHY7 261 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 BAIAP2Q9UQB8 552 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 GPR52Q9Y2T5 361 aa11.84□□□□□ -0.51
LYRM4-204ENST00000463032 USP9YO00507 2555 aaPredicted RBP11.84□□□□□ -0.51
LYRM4-204ENST00000463032 A0A096LPE4 126 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 A0A1W2PPZ6 126 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 SLC22A23A1A5C7 686 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 PRSS37A4D1T9 235 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 CENPBD1B2RD01 187 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 DHHO43323 396 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 RENP00797 406 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 NR2C1P13056 603 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 PSMB1P20618 241 aaKnown RBP11.83□□□□□ -0.52
LYRM4-204ENST00000463032 COX5AP20674 150 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 PEX2P28328 305 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 SLC34A1Q06495 639 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 PTGES3Q15185 160 aaKnown RBP11.83□□□□□ -0.52
LYRM4-204ENST00000463032 HIST3H3Q16695 136 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 ZIK1Q3SY52 487 aaPredicted RBP11.83□□□□□ -0.52
LYRM4-204ENST00000463032 THEM4Q5T1C6 240 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 ACSM5Q6NUN0 579 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 GALNT4Q8N4A0 578 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 STEAP2Q8NFT2 490 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 LINC01560Q8TB33 94 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 S100PBPQ96BU1 408 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 ZC3HAV1LQ96H79 300 aaKnown RBP11.83□□□□□ -0.52
LYRM4-204ENST00000463032 TEX12Q9BXU0 123 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 RNPEPL1Q9HAU8 725 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 USE1Q9NZ43 259 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 ALPK2Q86TB3 2170 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 COL12A1Q99715 3063 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 IGKV1D-43A0A0B4J1Z2 117 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 TUBAL3A6NHL2 446 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 RIIAD1A6NNX1 92 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 RPL36A-HNRNPH2H7BZ11 118 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 SLC16A7O60669 478 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 IFNGP01579 166 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 EPHA2P29317 976 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 HOXC12P31275 282 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 CCKARP32238 428 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 GRK5P34947 590 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 POLR2IP36954 125 aaKnown RBP11.83□□□□□ -0.52
LYRM4-204ENST00000463032 CENPAP49450 140 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 ZNF84P51523 738 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 RAD23AP54725 363 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 SORDQ00796 357 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 NPRL3Q12980 569 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 HIKESHIQ53FT3 197 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 MEX3BQ6ZN04 569 aaKnown RBP11.83□□□□□ -0.52
LYRM4-204ENST00000463032 CYB561A3Q8NBI2 242 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 OR1K1Q8NGR3 316 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 FNDC8Q8TC99 324 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 OTULINQ96BN8 352 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 PLEKHA8Q96JA3 519 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 MED18Q9BUE0 208 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 FN3KQ9H479 309 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 SRA1Q9HD15 236 aaKnown RBP11.83□□□□□ -0.52
LYRM4-204ENST00000463032 RPRD1BQ9NQG5 326 aaKnown RBP11.83□□□□□ -0.52
LYRM4-204ENST00000463032 TVP23BQ9NYZ1 205 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 NDRG3Q9UGV2 375 aa11.83□□□□□ -0.52
LYRM4-204ENST00000463032 FREM1Q5H8C1 2179 aa11.82□□□□□ -0.52
LYRM4-204ENST00000463032 A0A1W2PPL8 197 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms