RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 UPRTQ96BW1 309 aa6.48□□□□□ -1.37
SMC3-202ENST00000462899 ELMOD3Q96FG2 381 aa6.48□□□□□ -1.37
SMC3-202ENST00000462899 SLC41A3Q96GZ6 507 aa6.48□□□□□ -1.37
SMC3-202ENST00000462899 TIMD4Q96H15 378 aa6.48□□□□□ -1.37
SMC3-202ENST00000462899 FOXB1Q99853 325 aa6.48□□□□□ -1.37
SMC3-202ENST00000462899 DCAF16Q9NXF7 216 aa6.48□□□□□ -1.37
SMC3-202ENST00000462899 SLCO1C1Q9NYB5 712 aa6.48□□□□□ -1.37
SMC3-202ENST00000462899 PSMC3IPQ9P2W1 217 aaPredicted RBP6.48□□□□□ -1.37
SMC3-202ENST00000462899 FBXL3Q9UKT7 428 aa6.48□□□□□ -1.37
SMC3-202ENST00000462899 HIF3AQ9Y2N7 669 aa6.48□□□□□ -1.37
SMC3-202ENST00000462899 IGKV1D-42A0A075B6H8 117 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 ZSCAN5BA6NJL1 495 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 G3V4G9 280 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 AIM2O14862 343 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 PIN1P1O15428 100 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 RIPK2O43353 540 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 NPHS1O60500 1241 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 AHSA1O95433 338 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 RAB36O95755 333 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 IGLV1-40P01703 118 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 PATE4P0C8F1 98 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 OR8G3PP0DMU2 310 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 CPA3P15088 417 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 IL7RP16871 459 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 CD80P33681 288 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 RBMXP38159 391 aaKnown RBP6.47□□□□□ -1.37
SMC3-202ENST00000462899 RPS5P46782 204 aaKnown RBP6.47□□□□□ -1.37
SMC3-202ENST00000462899 MTNR1AP48039 350 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 MVDP53602 400 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 HPCAP84074 193 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 ID3Q02535 119 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 HLXQ14774 488 aaPredicted RBP6.47□□□□□ -1.37
SMC3-202ENST00000462899 TAF9Q16594 264 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 TMEM155Q4W5P6 130 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 ZNF774Q6NX45 483 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 ANKRD46Q86W74 232 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 SKA3Q8IX90 412 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 FNDC5Q8NAU1 212 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 SLC30A7Q8NEW0 376 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 PNPT1Q8TCS8 783 aaKnown RBP6.47□□□□□ -1.37
SMC3-202ENST00000462899 MGARPQ8TDB4 240 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 ST7LQ8TDW4 575 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 SNX33Q8WV41 574 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 TAAR8Q969N4 342 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 SIGLEC11Q96RL6 698 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 MS4A7Q9GZW8 240 aaPredicted RBP6.47□□□□□ -1.37
SMC3-202ENST00000462899 MTHFD2LQ9H903 347 aaPredicted RBP6.47□□□□□ -1.37
SMC3-202ENST00000462899 PATZ1Q9HBE1 687 aaKnown RBP6.47□□□□□ -1.37
SMC3-202ENST00000462899 MARCOQ9UEW3 520 aaPredicted RBP6.47□□□□□ -1.37
SMC3-202ENST00000462899 GPR160Q9UJ42 338 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 NPTNQ9Y639 398 aa6.47□□□□□ -1.37
SMC3-202ENST00000462899 TRAV40A0A0B4J280 105 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 PRSS51A0A1B0GVH4 220 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 AKAP8O43823 692 aaKnown RBP6.46□□□□□ -1.38
SMC3-202ENST00000462899 TRIM13O60858 407 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 GPANK1O95872 356 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 MT-ND5P03915 603 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 CD55P08174 381 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 CCL2P13500 99 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 GRPRP30550 384 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 PCGF2P35227 344 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 UCP2P55851 309 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 RPL15P61313 204 aaKnown RBP6.46□□□□□ -1.38
SMC3-202ENST00000462899 TXNL4AP83876 142 aaKnown RBP6.46□□□□□ -1.38
SMC3-202ENST00000462899 EMX2Q04743 252 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 PMS2P3Q13401 168 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 CAMK2DQ13557 499 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 TSTQ16762 297 aaKnown RBP6.46□□□□□ -1.38
SMC3-202ENST00000462899 SMU1Q2TAY7 513 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 DEFB112Q30KQ8 113 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 PGS1Q32NB8 556 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 LIN52Q52LA3 116 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 FAM69AQ5T7M9 428 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 FAM205BPQ63HN1 556 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 FIP1L1Q6UN15 594 aaKnown RBP6.46□□□□□ -1.38
SMC3-202ENST00000462899 Q6YL49 198 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 WDR88Q6ZMY6 472 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 H1FNTQ75WM6 255 aaPredicted RBP6.46□□□□□ -1.38
SMC3-202ENST00000462899 ZNF771Q7L3S4 317 aaPredicted RBP6.46□□□□□ -1.38
SMC3-202ENST00000462899 PIWIL3Q7Z3Z3 882 aaKnown RBP6.46□□□□□ -1.38
SMC3-202ENST00000462899 SERPINA11Q86U17 422 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 VRK2Q86Y07 508 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 CLIP4Q8N3C7 705 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 CADM2Q8N3J6 435 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 TMEM86BQ8N661 226 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 POU5F2Q8N7G0 328 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 ZNF283Q8N7M2 679 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 OR52E2Q8NGJ4 325 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 LINC01006Q8NI28 216 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 CCL17Q92583 94 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 UBE2FQ969M7 185 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 TESCQ96BS2 214 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 SLC25A36Q96CQ1 311 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 TXNDC15Q96J42 360 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 CCDC115Q96NT0 180 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 FANCD2OSQ96PS1 177 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 SLC35A5Q9BS91 424 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 MRI1Q9BV20 369 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 EMC6Q9BV81 110 aa6.46□□□□□ -1.38
SMC3-202ENST00000462899 TXLNGYQ9BZA5 131 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms