RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 hCG_2039718K7EN88 272 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 TPD52L2O43399 206 aaKnown RBP7.8□□□□□ -1.16
DDX39B-216ENST00000462421 FZD7O75084 574 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 GADD45GO95257 159 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 HPRP00739 348 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 HLA-HP01893 362 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 LCKP06239 509 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 OR4A8P0C604 315 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 DANCRP0C864 163 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 SLC25A16P16260 332 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 CCNOP22674 350 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 NTF4P34130 210 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 AQP2P41181 271 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 RAD52P43351 418 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 GIPRP48546 466 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 CENPAP49450 140 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 ARHGDIAP52565 204 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 EFNA4P52798 201 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 FOXG1P55316 489 aaPredicted RBP7.8□□□□□ -1.16
DDX39B-216ENST00000462421 CTXN1P60606 82 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 RPL27P61353 136 aaKnown RBP7.8□□□□□ -1.16
DDX39B-216ENST00000462421 SPOCK1Q08629 439 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 SGCAQ16586 387 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 NKPD1Q17RQ9 610 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 PGGHGQ32M88 737 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 NRN1LQ496H8 165 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 IQCCQ4KMZ1 466 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 MTX3Q5HYI7 312 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 THEM4Q5T1C6 240 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 KRT80Q6KB66 452 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 WDR88Q6ZMY6 472 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 MBOAT2Q6ZWT7 520 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 JAZF1Q86VZ6 243 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 NKAIN4Q8IVV8 208 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 DEFB107AQ8IZN7 70 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 SLC22A24Q8N4F4 322 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 LRRC17Q8N6Y2 441 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 RNF148Q8N7C7 305 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 SYT14Q8NB59 555 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 OR52L1Q8NGH7 329 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 OR4D11Q8NGI4 311 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 OR51A7Q8NH64 312 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 NSMAFQ92636 917 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 BOD1Q96IK1 185 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 ZNF570Q96NI8 536 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 TXNIPQ9H3M7 391 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 ZNF442Q9H7R0 627 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 SMURF2Q9HAU4 748 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 TMEM38BQ9NVV0 291 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 ABCD2Q9UBJ2 740 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 ENPP4Q9Y6X5 453 aa7.8□□□□□ -1.16
DDX39B-216ENST00000462421 POLQO75417 2590 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 TRIM64A6NGJ6 449 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 TRIM64BA6NI03 449 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 NPIPB13A6NJU9 1138 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 C12orf71A8MTZ7 269 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 NPIPB4C9JG80 1138 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 RNF223E7ERA6 249 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 H7C417 338 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 M0R233 179 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 NDUFS8O00217 210 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 PIP5K1CO60331 668 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 OR10H3O60404 316 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 NDUFB2O95178 105 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 IGKV3-15P01624 115 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 PGA4P0DJD7 388 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 PGA3P0DJD8 388 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 CALB2P22676 271 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 GCH1P30793 250 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 GPR4P46093 362 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 GDI2P50395 445 aaKnown RBP7.79□□□□□ -1.16
DDX39B-216ENST00000462421 GYS2P54840 703 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 MYBPC1Q00872 1141 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 PRKCDQ05655 676 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 LTBQ06643 244 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 FAM98BQ52LJ0 330 aaKnown RBP7.79□□□□□ -1.16
DDX39B-216ENST00000462421 RGS7BPQ6MZT1 257 aaPredicted RBP7.79□□□□□ -1.16
DDX39B-216ENST00000462421 TMEM154Q6P9G4 183 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 TREML1Q86YW5 311 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 C1orf174Q8IYL3 243 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 LRRC18Q8N456 261 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 LINC00471Q8N535 108 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 CPEB3Q8NE35 698 aaKnown RBP7.79□□□□□ -1.16
DDX39B-216ENST00000462421 SLC30A7Q8NEW0 376 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 OR4K5Q8NGD3 323 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 NEU4Q8WWR8 484 aaPredicted RBP7.79□□□□□ -1.16
DDX39B-216ENST00000462421 ASB10Q8WXI3 467 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 C11orf40Q8WZ69 217 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 TMEM54Q969K7 222 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 MCHR2Q969V1 340 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 PYURFQ96I23 114 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 NSL1Q96IY1 281 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 COX4I2Q96KJ9 171 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 CCT8L2Q96SF2 557 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 CDRT15Q96T59 188 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 WFDC6Q9BQY6 131 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 ZNF426Q9BUY5 554 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 MYLK2Q9H1R3 596 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 MS4A5Q9H3V2 200 aa7.79□□□□□ -1.16
DDX39B-216ENST00000462421 RERGLQ9H628 205 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms