RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 IGFN1Q86VF2 1251 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 RNF113BQ8IZP6 322 aaKnown RBP13.38□□□□□ -0.27
VARS-219ENST00000461328 SYT14Q8NB59 555 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 OR13C2Q8NGS9 318 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 OR51A7Q8NH64 312 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 LIPHQ8WWY8 451 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 ASB10Q8WXI3 467 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 NSL1Q96IY1 281 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 ANKRD19PQ9H560 264 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 SEC61A2Q9H9S3 476 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 KRCC1Q9NPI7 259 aaPredicted RBP13.38□□□□□ -0.27
VARS-219ENST00000461328 NDUFAF4Q9P032 175 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 CRNNQ9UBG3 495 aaPredicted RBP13.38□□□□□ -0.27
VARS-219ENST00000461328 TMEM5Q9Y2B1 443 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 HIF3AQ9Y2N7 669 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 A0A087WUU8 490 aa13.37□□□□□ -0.27
VARS-219ENST00000461328 ZNF503-AS2A6NEH8 195 aa13.37□□□□□ -0.27
VARS-219ENST00000461328 RNF223E7ERA6 249 aa13.37□□□□□ -0.27
VARS-219ENST00000461328 DHHO43323 396 aa13.37□□□□□ -0.27
VARS-219ENST00000461328 SSX4O60224 188 aa13.37□□□□□ -0.27
VARS-219ENST00000461328 DIRAS1O95057 198 aa13.37□□□□□ -0.27
VARS-219ENST00000461328 UBL3O95164 117 aa13.37□□□□□ -0.27
VARS-219ENST00000461328 FARS2O95363 451 aaKnown RBP13.37□□□□□ -0.27
VARS-219ENST00000461328 IGKV3-15P01624 115 aa13.37□□□□□ -0.27
VARS-219ENST00000461328 IGLV1-44P01699 117 aa13.37□□□□□ -0.27
VARS-219ENST00000461328 BMP4P12644 408 aa13.37□□□□□ -0.27
VARS-219ENST00000461328 NR2C1P13056 603 aa13.37□□□□□ -0.27
VARS-219ENST00000461328 ACADSP16219 412 aa13.37□□□□□ -0.27
VARS-219ENST00000461328 APOBEC3AP31941 199 aaPredicted RBP13.37□□□□□ -0.27
VARS-219ENST00000461328 PTDSS1P48651 473 aaKnown RBP13.37□□□□□ -0.27
VARS-219ENST00000461328 ZNF84P51523 738 aa13.37□□□□□ -0.27
VARS-219ENST00000461328 CTXN1P60606 82 aa13.37□□□□□ -0.27
VARS-219ENST00000461328 VLDLRP98155 873 aa13.37□□□□□ -0.27
VARS-219ENST00000461328 SPIBQ01892 262 aa13.37□□□□□ -0.27
VARS-219ENST00000461328 PRKCDQ05655 676 aa13.37□□□□□ -0.27
VARS-219ENST00000461328 CHRNB3Q05901 458 aa13.37□□□□□ -0.27
VARS-219ENST00000461328 RUNX1T1Q06455 604 aa13.37□□□□□ -0.27
VARS-219ENST00000461328 PIGFQ07326 219 aa13.37□□□□□ -0.27
VARS-219ENST00000461328 FAM169BQ8N8A8 192 aa13.37□□□□□ -0.27
VARS-219ENST00000461328 PYURFQ96I23 114 aa13.37□□□□□ -0.27
VARS-219ENST00000461328 ZNF347Q96SE7 839 aa13.37□□□□□ -0.27
VARS-219ENST00000461328 CD300AQ9UGN4 299 aa13.37□□□□□ -0.27
VARS-219ENST00000461328 A0A1W2PRQ8 180 aa13.36□□□□□ -0.27
VARS-219ENST00000461328 TRMUO75648 421 aaKnown RBP13.36□□□□□ -0.27
VARS-219ENST00000461328 CALB2P22676 271 aa13.36□□□□□ -0.27
VARS-219ENST00000461328 RPL4P36578 427 aaKnown RBP13.36□□□□□ -0.27
VARS-219ENST00000461328 SLC9A3P48764 834 aa13.36□□□□□ -0.27
VARS-219ENST00000461328 DGCR6Q14129 220 aa13.36□□□□□ -0.27
VARS-219ENST00000461328 RAB35Q15286 201 aa13.36□□□□□ -0.27
VARS-219ENST00000461328 TAF11Q15544 211 aa13.36□□□□□ -0.27
VARS-219ENST00000461328 KRTAP21-3Q3LHN1 58 aa13.36□□□□□ -0.27
VARS-219ENST00000461328 SPATS1Q496A3 300 aa13.36□□□□□ -0.27
VARS-219ENST00000461328 PODNL1Q6PEZ8 512 aa13.36□□□□□ -0.27
VARS-219ENST00000461328 PIWIL3Q7Z3Z3 882 aaKnown RBP13.36□□□□□ -0.27
VARS-219ENST00000461328 MYPOPQ86VE0 399 aaPredicted RBP13.36□□□□□ -0.27
VARS-219ENST00000461328 SLC22A24Q8N4F4 322 aa13.36□□□□□ -0.27
VARS-219ENST00000461328 OR4F15Q8NGB8 312 aa13.36□□□□□ -0.27
VARS-219ENST00000461328 OR52J3Q8NH60 311 aa13.36□□□□□ -0.27
VARS-219ENST00000461328 SLC7A13Q8TCU3 470 aa13.36□□□□□ -0.27
VARS-219ENST00000461328 MCHR2Q969V1 340 aa13.36□□□□□ -0.27
VARS-219ENST00000461328 FBXO17Q96EF6 278 aa13.36□□□□□ -0.27
VARS-219ENST00000461328 FAM46AQ96IP4 442 aaKnown RBP13.36□□□□□ -0.27
VARS-219ENST00000461328 REG4Q9BYZ8 158 aa13.36□□□□□ -0.27
VARS-219ENST00000461328 TXNIPQ9H3M7 391 aa13.36□□□□□ -0.27
VARS-219ENST00000461328 TMEM38BQ9NVV0 291 aa13.36□□□□□ -0.27
VARS-219ENST00000461328 ADAM21Q9UKJ8 722 aa13.36□□□□□ -0.27
VARS-219ENST00000461328 AURKCQ9UQB9 309 aa13.36□□□□□ -0.27
VARS-219ENST00000461328 NPIPB13A6NJU9 1138 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 CENPBD1B2RD01 187 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 NPIPB4C9JG80 1138 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 H7C417 338 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 FABP3P05413 133 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 TSPAN19P0C672 248 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 OR8G3PP0DMU2 310 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 CALCRP30988 508 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 GIPRP48546 466 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 SMIM11AP58511 58 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 RPL27P61353 136 aaKnown RBP13.35□□□□□ -0.27
VARS-219ENST00000461328 FXNQ16595 210 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 ANKDD1AQ495B1 522 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 ARMC4Q5T2S8 1044 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 FAM205BPQ63HN1 556 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 LRFN4Q6PJG9 635 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 CYP2R1Q6VVX0 501 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 ZNF627Q7L945 461 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 TSEN54Q7Z6J9 526 aaKnown RBP13.35□□□□□ -0.27
VARS-219ENST00000461328 MAPK1IP1LQ8NDC0 245 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 OR4K5Q8NGD3 323 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 NSMAFQ92636 917 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 HTRA1Q92743 480 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 C7orf34Q96L11 122 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 TNFRSF13CQ96RJ3 184 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 RHNO1Q9BSD3 238 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 RNF121Q9H920 327 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 NOX3Q9HBY0 568 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 CA10Q9NS85 328 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 PMF1-BGLAPU3KQ54 211 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 ZFHX3Q15911 3703 aa13.35□□□□□ -0.27
VARS-219ENST00000461328 HEATR1Q9H583 2144 aaKnown RBP13.34□□□□□ -0.27
VARS-219ENST00000461328 PLCE1Q9P212 2302 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms